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The map label for this gene is atpH [H]

Identifier: 138896938

GI number: 138896938

Start: 3416616

End: 3417152

Strand: Reverse

Name: atpH [H]

Synonym: GTNG_3307

Alternate gene names: 138896938

Gene position: 3417152-3416616 (Counterclockwise)

Preceding gene: 138896939

Following gene: 138896937

Centisome position: 96.25

GC content: 53.07

Gene sequence:

>537_bases
ATGAACCAAGAAGTGATCGCTAAACGGTATGCATCCGCTCTGTTTCAAATCGCGCTTGAACAACAGCAGCTGGACCAAAT
CGAAGAAGACATTCGCGCCGTGCGCCAAGCGTTGGCGGAAAACGGCGAGTTTTTATCGCTTCTTTCCAATCCGAAACTTT
CCTTAGACAAGAAAAAAGCGCTCGTTCGCGAAGCGTTTGCCGGCGTTTCCGCTCCGGTGCAACATACGCTTTTGCTTCTT
CTTGAGCGCCATCGCTTCGGCATTGTGCCTGAACTGGCCGAGCAGTTTATCGCCCTCGCTAACGACGCACGCGGTATCGC
TGAGGCGGTCGCCTATTCGGCACGGCCGTTGACGGATGAAGAACTGCAGGCGCTTTCTGACGTATTTGCCAAAAAAGTTG
GCAAAGAAACGCTCCGCATTGAAAATATCGTCGACCCGGAACTGATTGGCGGCGTGAAGTTGCGCATCGGCAACCGCATT
TATGACGGCAGCGTCAGCGGACAGCTAGAACGGATTCAGCGGCAGCTCATTAGTTAA

Upstream 100 bases:

>100_bases
TCATCGCCTCGAAAGTGATTGAAAGAGAATTGACCGAACAAGACCAGCGCAAGCTGATCGAAGCATACATTAAGGACATT
CAAGAGGTAGGAGGAGCGCG

Downstream 100 bases:

>100_bases
CATTAGGAGACAGGGGTGAAAGGCATGAGCATTAGAGCGGAAGAAATTAGCGCGCTCATTAAGCAGCAGATTGAAAACTA
CGAATCGCAAATCCAAGTGA

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta [H]

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MNQEVIAKRYASALFQIALEQQQLDQIEEDIRAVRQALAENGEFLSLLSNPKLSLDKKKALVREAFAGVSAPVQHTLLLL
LERHRFGIVPELAEQFIALANDARGIAEAVAYSARPLTDEELQALSDVFAKKVGKETLRIENIVDPELIGGVKLRIGNRI
YDGSVSGQLERIQRQLIS

Sequences:

>Translated_178_residues
MNQEVIAKRYASALFQIALEQQQLDQIEEDIRAVRQALAENGEFLSLLSNPKLSLDKKKALVREAFAGVSAPVQHTLLLL
LERHRFGIVPELAEQFIALANDARGIAEAVAYSARPLTDEELQALSDVFAKKVGKETLRIENIVDPELIGGVKLRIGNRI
YDGSVSGQLERIQRQLIS
>Mature_178_residues
MNQEVIAKRYASALFQIALEQQQLDQIEEDIRAVRQALAENGEFLSLLSNPKLSLDKKKALVREAFAGVSAPVQHTLLLL
LERHRFGIVPELAEQFIALANDARGIAEAVAYSARPLTDEELQALSDVFAKKVGKETLRIENIVDPELIGGVKLRIGNRI
YDGSVSGQLERIQRQLIS

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction [H]

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family [H]

Homologues:

Organism=Homo sapiens, GI4502303, Length=178, Percent_Identity=29.7752808988764, Blast_Score=64, Evalue=8e-11,
Organism=Escherichia coli, GI1790173, Length=168, Percent_Identity=26.1904761904762, Blast_Score=64, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71984710, Length=173, Percent_Identity=29.4797687861272, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71984717, Length=173, Percent_Identity=29.4797687861272, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6320504, Length=173, Percent_Identity=27.1676300578035, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000711
- InterPro:   IPR020781 [H]

Pfam domain/function: PF00213 OSCP [H]

EC number: 3.6.3.14

Molecular weight: Translated: 19772; Mature: 19772

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQEVIAKRYASALFQIALEQQQLDQIEEDIRAVRQALAENGEFLSLLSNPKLSLDKKKA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCCCCCHHHHHH
LVREAFAGVSAPVQHTLLLLLERHRFGIVPELAEQFIALANDARGIAEAVAYSARPLTDE
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ELQALSDVFAKKVGKETLRIENIVDPELIGGVKLRIGNRIYDGSVSGQLERIQRQLIS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEECCEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNQEVIAKRYASALFQIALEQQQLDQIEEDIRAVRQALAENGEFLSLLSNPKLSLDKKKA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCCCCCHHHHHH
LVREAFAGVSAPVQHTLLLLLERHRFGIVPELAEQFIALANDARGIAEAVAYSARPLTDE
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ELQALSDVFAKKVGKETLRIENIVDPELIGGVKLRIGNRIYDGSVSGQLERIQRQLIS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEECCEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA