| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
Click here to switch to the map view.
The map label for this gene is yadD [C]
Identifier: 138896884
GI number: 138896884
Start: 3363222
End: 3364076
Strand: Reverse
Name: yadD [C]
Synonym: GTNG_3251
Alternate gene names: 138896884
Gene position: 3364076-3363222 (Counterclockwise)
Preceding gene: 138896886
Following gene: 138896883
Centisome position: 94.75
GC content: 40.47
Gene sequence:
>855_bases ATGGCCGTCGATCACGACCGCTTGTTTAAAGAGCTCATCACAACGTTTTTTGAAGAGTTTATTCTTCTCTTTTTCCCGCA AGTGCACGAGCATATTGATTTTCACCATTTATCATTTTTATCTGAAGAACTGTTCACGGACGTGACCGCTGGGGAAAAAT ATCGCGTTGATTTGTTAGTGGAAACGAAGCTAAAAGGGGAAGACGGTTTAATTATCGTCCATATCGAAAACCAAAGCTAC GTTCAACCATCGTTTCCAGAGCGTATGTTTATTTACTTCAGCCGCTTGTTTGAAAAATACCGCACGAACATCGTTCCGAT TGCCGTCTTCAGCTACGATACAATCCGCGACGAACCATCTTCATTTACGCTTCGACTTCCATTTGGGAACATACTCCACT TCCGTTTTTTCACCGTCGAGCTGCGCAAACAAAACTGGCGTCATTATATTCGCAACGACAACCCGATCGCCGCTGCGCTG TTAAGCAAAATGGGGTATACTGAAAGTGAACGAATTGAATTGAAAAAACAATTTTTACGCATGCTTGTGCGCATGGAATT AGACGAAGCAAAGCAACGATTGTTAATCGGCTTTTTCGAAACATATGTGCAACTGTCGGATGAAGAAGAACAACAATTAC GAAACGAGGTGAACAAGATGGAAACGAAAGAAAAAGAACAAGTGCTCGAATTGTTAATTTCGTATGAGCAAAAAGGATTA AAAGAGGGTGTAAAAAAAGGATTACAACAAGAAAAGCGACAAATTGCGAAAAAGATGTTGGTAAAAGGGTACGACATCCA AACGATTCACGAATTAACCGAACTGCCGATTGAAGAGATTGAAAAATTGAAATAA
Upstream 100 bases:
>100_bases GATTGGCTCTCTGCTTTTGTTTAAAAAATTCATTCCCAAGCAGGAATTTGGTTCGTTTTGTCGAAAAAGTATGTAAAATT TTTGGAGGTGAGGTAAATGT
Downstream 100 bases:
>100_bases GGGTGTGATTGTGATGTTTAACAGAGAGCCATCGATTGCCCCTCTGTCATTTTTTTAAAGTGGTATGTAGCAGTAAGGCG GTATTTAGCAAATATGAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MAVDHDRLFKELITTFFEEFILLFFPQVHEHIDFHHLSFLSEELFTDVTAGEKYRVDLLVETKLKGEDGLIIVHIENQSY VQPSFPERMFIYFSRLFEKYRTNIVPIAVFSYDTIRDEPSSFTLRLPFGNILHFRFFTVELRKQNWRHYIRNDNPIAAAL LSKMGYTESERIELKKQFLRMLVRMELDEAKQRLLIGFFETYVQLSDEEEQQLRNEVNKMETKEKEQVLELLISYEQKGL KEGVKKGLQQEKRQIAKKMLVKGYDIQTIHELTELPIEEIEKLK
Sequences:
>Translated_284_residues MAVDHDRLFKELITTFFEEFILLFFPQVHEHIDFHHLSFLSEELFTDVTAGEKYRVDLLVETKLKGEDGLIIVHIENQSY VQPSFPERMFIYFSRLFEKYRTNIVPIAVFSYDTIRDEPSSFTLRLPFGNILHFRFFTVELRKQNWRHYIRNDNPIAAAL LSKMGYTESERIELKKQFLRMLVRMELDEAKQRLLIGFFETYVQLSDEEEQQLRNEVNKMETKEKEQVLELLISYEQKGL KEGVKKGLQQEKRQIAKKMLVKGYDIQTIHELTELPIEEIEKLK >Mature_283_residues AVDHDRLFKELITTFFEEFILLFFPQVHEHIDFHHLSFLSEELFTDVTAGEKYRVDLLVETKLKGEDGLIIVHIENQSYV QPSFPERMFIYFSRLFEKYRTNIVPIAVFSYDTIRDEPSSFTLRLPFGNILHFRFFTVELRKQNWRHYIRNDNPIAAALL SKMGYTESERIELKKQFLRMLVRMELDEAKQRLLIGFFETYVQLSDEEEQQLRNEVNKMETKEKEQVLELLISYEQKGLK EGVKKGLQQEKRQIAKKMLVKGYDIQTIHELTELPIEEIEKLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33994; Mature: 33863
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVDHDRLFKELITTFFEEFILLFFPQVHEHIDFHHLSFLSEELFTDVTAGEKYRVDLLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEE ETKLKGEDGLIIVHIENQSYVQPSFPERMFIYFSRLFEKYRTNIVPIAVFSYDTIRDEPS EEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEHHHCCCCC SFTLRLPFGNILHFRFFTVELRKQNWRHYIRNDNPIAAALLSKMGYTESERIELKKQFLR CEEEECCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH MLVRMELDEAKQRLLIGFFETYVQLSDEEEQQLRNEVNKMETKEKEQVLELLISYEQKGL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEGVKKGLQQEKRQIAKKMLVKGYDIQTIHELTELPIEEIEKLK HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHCCC >Mature Secondary Structure AVDHDRLFKELITTFFEEFILLFFPQVHEHIDFHHLSFLSEELFTDVTAGEKYRVDLLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEE ETKLKGEDGLIIVHIENQSYVQPSFPERMFIYFSRLFEKYRTNIVPIAVFSYDTIRDEPS EEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEHHHCCCCC SFTLRLPFGNILHFRFFTVELRKQNWRHYIRNDNPIAAALLSKMGYTESERIELKKQFLR CEEEECCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH MLVRMELDEAKQRLLIGFFETYVQLSDEEEQQLRNEVNKMETKEKEQVLELLISYEQKGL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEGVKKGLQQEKRQIAKKMLVKGYDIQTIHELTELPIEEIEKLK HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA