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The map label for this gene is yrrN [H]

Identifier: 138896120

GI number: 138896120

Start: 2586366

End: 2587295

Strand: Reverse

Name: yrrN [H]

Synonym: GTNG_2483

Alternate gene names: 138896120

Gene position: 2587295-2586366 (Counterclockwise)

Preceding gene: 138896121

Following gene: 138896119

Centisome position: 72.88

GC content: 51.08

Gene sequence:

>930_bases
ATGAAAAAACCGGAATTGCTCGTCACACCGACGAGCGTTTCCCATATTGACGAACTCGCGAAAGCGGGAGCGGACGCTGT
CATTGTCGGCGAACAGCGCTATGGCTTGCGGCTCGCTGGCGAGTTTTCCCGCACCGATGTCGCCGCGGCTGTTGAAGCGG
CCCGCCGGCACGGCATGAATGTTTACGTGGCGATGAACGCCATTTTTCATAATGATAAAGTGGACGAACTCGCTGATTAC
GTCGCCTTTGTCGCCGACGTAGGCGCTGATGCCATCGTCTTCGGCGACCCAGCGGTTTTACTGACAGTACGAGAAACCGC
CCCTCATATGAAGCTCCATTGGAGCACGGAAACGACAGCGACAAACTGGTATACGTGCAACTACTGGGGACGAAAAGGAG
CGAAACGCGCCGTCTTGGCGCGCGAGCTGAACATGGACGCCATTTTAGAAATCAAGGCCCATGCCGAAGTGGAAATCGAA
GTGCAAGTGCATGGCATGACGTGCATGTATCAGTCGAAGCGTTCACTGATCGGCAACTATTTTGAATATCAAGGAAAAGT
GATGGAAATTGAACGGAAAAAGTATGAAAAAGGGATGTTCCTGTACGACAAAGAACGCGACCATAAATACCCGATTTTTG
AAGACGAAAACGGCACACACATTATGAGCCCGAACGATCTTTGCATTATTGACGAACTGGGCGACATGGTGAATGCTGGC
ATTGACAGCTTTAAAATCGACGGTATTTTGCATGAACCGGGCTACATTACCGAAGTGACGAAGCTGTATCGCCATGCCAT
CGATTTATGCGCCGATGACCGTGAGCGCTACGAGAAGGAGAAAGACGATTTGCTCGCTGCCGTTGAAGCGCTCCAGCCGC
CGCACCGCCGAATTGATACCGGATTTTTCTTCAAAGAAACGATTTATTGA

Upstream 100 bases:

>100_bases
GTCGCTACAACGAATGGCTGATGGCCCGGAGCGATTATGACACGATCATCATTCCGGTCGGGGACGGGCTCGCTATATCG
AAAAAACGAGGTGAACGAGA

Downstream 100 bases:

>100_bases
AAAAGGAGGGAAACGACATGTTGCTGAAAAATGAACGCATTTCCGAGATCGTTGACGGCAAGCGCGTCATCGTAAAAAAG
CCGGAGTTGCTCGCGCCGGC

Product: protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKKPELLVTPTSVSHIDELAKAGADAVIVGEQRYGLRLAGEFSRTDVAAAVEAARRHGMNVYVAMNAIFHNDKVDELADY
VAFVADVGADAIVFGDPAVLLTVRETAPHMKLHWSTETTATNWYTCNYWGRKGAKRAVLARELNMDAILEIKAHAEVEIE
VQVHGMTCMYQSKRSLIGNYFEYQGKVMEIERKKYEKGMFLYDKERDHKYPIFEDENGTHIMSPNDLCIIDELGDMVNAG
IDSFKIDGILHEPGYITEVTKLYRHAIDLCADDRERYEKEKDDLLAAVEALQPPHRRIDTGFFFKETIY

Sequences:

>Translated_309_residues
MKKPELLVTPTSVSHIDELAKAGADAVIVGEQRYGLRLAGEFSRTDVAAAVEAARRHGMNVYVAMNAIFHNDKVDELADY
VAFVADVGADAIVFGDPAVLLTVRETAPHMKLHWSTETTATNWYTCNYWGRKGAKRAVLARELNMDAILEIKAHAEVEIE
VQVHGMTCMYQSKRSLIGNYFEYQGKVMEIERKKYEKGMFLYDKERDHKYPIFEDENGTHIMSPNDLCIIDELGDMVNAG
IDSFKIDGILHEPGYITEVTKLYRHAIDLCADDRERYEKEKDDLLAAVEALQPPHRRIDTGFFFKETIY
>Mature_309_residues
MKKPELLVTPTSVSHIDELAKAGADAVIVGEQRYGLRLAGEFSRTDVAAAVEAARRHGMNVYVAMNAIFHNDKVDELADY
VAFVADVGADAIVFGDPAVLLTVRETAPHMKLHWSTETTATNWYTCNYWGRKGAKRAVLARELNMDAILEIKAHAEVEIE
VQVHGMTCMYQSKRSLIGNYFEYQGKVMEIERKKYEKGMFLYDKERDHKYPIFEDENGTHIMSPNDLCIIDELGDMVNAG
IDSFKIDGILHEPGYITEVTKLYRHAIDLCADDRERYEKEKDDLLAAVEALQPPHRRIDTGFFFKETIY

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=349, Percent_Identity=29.7994269340974, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI87081910, Length=252, Percent_Identity=27.7777777777778, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1789548, Length=301, Percent_Identity=25.2491694352159, Blast_Score=98, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 35102; Mature: 35102

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPELLVTPTSVSHIDELAKAGADAVIVGEQRYGLRLAGEFSRTDVAAAVEAARRHGMN
CCCCCEEEECCCHHHHHHHHHCCCCEEEECCCCCCEEEECCCCHHHHHHHHHHHHHCCCE
VYVAMNAIFHNDKVDELADYVAFVADVGADAIVFGDPAVLLTVRETAPHMKLHWSTETTA
EEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCEEEEECCCCCC
TNWYTCNYWGRKGAKRAVLARELNMDAILEIKAHAEVEIEVQVHGMTCMYQSKRSLIGNY
CCCEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCEEEEEEEEECEEEEEHHHHHHHHHH
FEYQGKVMEIERKKYEKGMFLYDKERDHKYPIFEDENGTHIMSPNDLCIIDELGDMVNAG
HHHCCEEEEEHHHHHHCCCEEEECCCCCCCCEEECCCCCEEECCCCEEEEHHHHHHHHCC
IDSFKIDGILHEPGYITEVTKLYRHAIDLCADDRERYEKEKDDLLAAVEALQPPHRRIDT
CCCEEECEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCC
GFFFKETIY
CEEEEECCC
>Mature Secondary Structure
MKKPELLVTPTSVSHIDELAKAGADAVIVGEQRYGLRLAGEFSRTDVAAAVEAARRHGMN
CCCCCEEEECCCHHHHHHHHHCCCCEEEECCCCCCEEEECCCCHHHHHHHHHHHHHCCCE
VYVAMNAIFHNDKVDELADYVAFVADVGADAIVFGDPAVLLTVRETAPHMKLHWSTETTA
EEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCEEEEECCCCCC
TNWYTCNYWGRKGAKRAVLARELNMDAILEIKAHAEVEIEVQVHGMTCMYQSKRSLIGNY
CCCEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCEEEEEEEEECEEEEEHHHHHHHHHH
FEYQGKVMEIERKKYEKGMFLYDKERDHKYPIFEDENGTHIMSPNDLCIIDELGDMVNAG
HHHCCEEEEEHHHHHHCCCEEEECCCCCCCCEEECCCCCEEECCCCEEEEHHHHHHHHCC
IDSFKIDGILHEPGYITEVTKLYRHAIDLCADDRERYEKEKDDLLAAVEALQPPHRRIDT
CCCEEECEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCC
GFFFKETIY
CEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]