| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
Click here to switch to the map view.
The map label for this gene is sda [H]
Identifier: 138896100
GI number: 138896100
Start: 2568834
End: 2569070
Strand: Direct
Name: sda [H]
Synonym: GTNG_2463
Alternate gene names: 138896100
Gene position: 2568834-2569070 (Clockwise)
Preceding gene: 138896091
Following gene: 138896102
Centisome position: 72.36
GC content: 37.97
Gene sequence:
>237_bases TTGTTCTCGTTTGTAAATCGTGATACAGTGAAAGTAACCTACCATTATATGTATGGACTGCCTAACATATTCCTTCAAAA AGGAGGGAGAGCGCCGATGAAGCATTTGTCCGATGAACTGTTGATCGAATCATACTTCAAGGCGAAAGAACTCAATTTAA GTCCGGAATTCATTGAACTAATCGAAAAGGAAATCCAGCGCCGGTCATTGACTCATAAAATTAAATTGTCATCATAA
Upstream 100 bases:
>100_bases CTGTTGCCCACATTATACACACAATAGCGATAAGGTCCTACTCACGTTATAAACATCTTTTCCACATGTTATCCACTGCC TTCTGTGGATAATAGAACGG
Downstream 100 bases:
>100_bases ACGAAGGGCCCTTGGGCTTTTTTTTGTTTGTCCAAACAGCCCGCGCCTAGCACCAATAGCCAAGGCGCTCGCCGACTTTA ATCGGCATCGGCGGATGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Histidine kinase kinA inhibitor [H]
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MFSFVNRDTVKVTYHYMYGLPNIFLQKGGRAPMKHLSDELLIESYFKAKELNLSPEFIELIEKEIQRRSLTHKIKLSS
Sequences:
>Translated_78_residues MFSFVNRDTVKVTYHYMYGLPNIFLQKGGRAPMKHLSDELLIESYFKAKELNLSPEFIELIEKEIQRRSLTHKIKLSS >Mature_78_residues MFSFVNRDTVKVTYHYMYGLPNIFLQKGGRAPMKHLSDELLIESYFKAKELNLSPEFIELIEKEIQRRSLTHKIKLSS
Specific function: Mediates a developmental checkpoint inhibiting initiation of sporulation (by preventing phosphorylation of spo0A) in response to defects in the replication initiation machinery. Inhibits autophosphorylation of the histidine protein kinase kinA, forming a
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015064 [H]
Pfam domain/function: PF08970 Sda [H]
EC number: NA
Molecular weight: Translated: 9220; Mature: 9220
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSFVNRDTVKVTYHYMYGLPNIFLQKGGRAPMKHLSDELLIESYFKAKELNLSPEFIEL CCCCCCCCEEEEEEHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IEKEIQRRSLTHKIKLSS HHHHHHHHHHHHEEEECC >Mature Secondary Structure MFSFVNRDTVKVTYHYMYGLPNIFLQKGGRAPMKHLSDELLIESYFKAKELNLSPEFIEL CCCCCCCCEEEEEEHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IEKEIQRRSLTHKIKLSS HHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]