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The map label for this gene is yqfO [H]

Identifier: 138896052

GI number: 138896052

Start: 2523860

End: 2524981

Strand: Reverse

Name: yqfO [H]

Synonym: GTNG_2415

Alternate gene names: 138896052

Gene position: 2524981-2523860 (Counterclockwise)

Preceding gene: 138896053

Following gene: 138896049

Centisome position: 71.12

GC content: 55.88

Gene sequence:

>1122_bases
ATGAGCCGCATTCCGTACGGCTACGAGGTCATTCAGCTTTTCGAGCAGCTCGCCCCGAAGTCATTAGCCATGGAGGGAGA
CCGGATCGGCCTGCAAATCGGAACGTTGAACAAGCCGGTCAAAAAAGTGATGGTTGCCCTTGATGTGCTCGAAGATGTTA
TCGCTGAAGCTGTTGATCAACAAGTCGATTTAATTATCGCTCACCATCCGCCGCTCTATCGACCACTGAAACAGCTGTTG
ACCGATGACGGACATGGTCGGATGATCGCGGCATGCGTCAAGCACGACATTGCCGTGTACGCTGCTCATACGAATTTAGA
TGTCGCCGCTGGCGGATTGAACGACTGGCTCGCTGAAGCGCTTGGTTTACATGAAACGACCGTGCTTGTGCCAACATACA
CGGAAGCGCTGAAAAAGCTTGTCGTCTATGTGCCGACGAGCCACGCTGAGGCGGTGCGGGCGGCCATAGGCGATGCCGGT
GCCGGTCATATTGGCCGTTACAGTCATTGTACGTTCAACAGCCGCGGCATCGGAACGTTTTTGCCGGAAGAAGGGGCCCA
GCCGTTTATCGGCGAGCAAGGGCGGCTTGAGGAAGTGGAGGAAGTTCGCATTGAAACGATCGTTCCGGCCTCGCTTGAGC
GCCAAGTGATCGAGGCGATGCTCGCCGCCCATCCGTATGAAGAGGTGGCGTACGACATTTATCCGCTTGACAACGAAGGG
CGTCGCTTCGGACTCGGTCGCATTGGTCGGTTGCCGCAGCCGGTGACGTTACGCGCCTTTGCCGAACAAGTGAAAACGGC
GTTTTCCGTTCCGGCTGTGCGTGTTGTCGGCCGGCTTGATGACCTTGTGCAAACTGTTGCCGTGCTTGGCGGAGACGGAA
ATAAGTTTGTCGCTGCCGCCGCATCGGCTGGGGCTGATGTGTATGTAACCGGGGATGTGTATTATCATACCGCCCATGAC
GCCCAAGCGCTCGGTCTCCATCTTGTCGATCCCGGACATAACGTCGAAAAAGTAATGAAACAAGGCGTCGCCCGTTATTT
AACCGCCGAACTCACGAAGCGGCAGTGGGAGGCGGAGGTCATCGTTTCAAACGTCCATACCGATCCGTTTCAGTTCGTGT
GA

Upstream 100 bases:

>100_bases
GGATTATTGCCGATTTAGCGGAGAAGGGAGAAAGTGAATCGGCTCGGGAGAAAAAGCGTGAACTGGAGAAAAAAGTCCAA
TTGGTAGAGGAGGCGTTGGC

Downstream 100 bases:

>100_bases
GCGGAGATGAAAAAAGGCTGTCCTGCAAGCGGTTCAACCGCTTGTTCAGGATAGCCTTTGTTTATGGACGAACGGCTGTT
ATTCTTCTTTCTTTGTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MSRIPYGYEVIQLFEQLAPKSLAMEGDRIGLQIGTLNKPVKKVMVALDVLEDVIAEAVDQQVDLIIAHHPPLYRPLKQLL
TDDGHGRMIAACVKHDIAVYAAHTNLDVAAGGLNDWLAEALGLHETTVLVPTYTEALKKLVVYVPTSHAEAVRAAIGDAG
AGHIGRYSHCTFNSRGIGTFLPEEGAQPFIGEQGRLEEVEEVRIETIVPASLERQVIEAMLAAHPYEEVAYDIYPLDNEG
RRFGLGRIGRLPQPVTLRAFAEQVKTAFSVPAVRVVGRLDDLVQTVAVLGGDGNKFVAAAASAGADVYVTGDVYYHTAHD
AQALGLHLVDPGHNVEKVMKQGVARYLTAELTKRQWEAEVIVSNVHTDPFQFV

Sequences:

>Translated_373_residues
MSRIPYGYEVIQLFEQLAPKSLAMEGDRIGLQIGTLNKPVKKVMVALDVLEDVIAEAVDQQVDLIIAHHPPLYRPLKQLL
TDDGHGRMIAACVKHDIAVYAAHTNLDVAAGGLNDWLAEALGLHETTVLVPTYTEALKKLVVYVPTSHAEAVRAAIGDAG
AGHIGRYSHCTFNSRGIGTFLPEEGAQPFIGEQGRLEEVEEVRIETIVPASLERQVIEAMLAAHPYEEVAYDIYPLDNEG
RRFGLGRIGRLPQPVTLRAFAEQVKTAFSVPAVRVVGRLDDLVQTVAVLGGDGNKFVAAAASAGADVYVTGDVYYHTAHD
AQALGLHLVDPGHNVEKVMKQGVARYLTAELTKRQWEAEVIVSNVHTDPFQFV
>Mature_372_residues
SRIPYGYEVIQLFEQLAPKSLAMEGDRIGLQIGTLNKPVKKVMVALDVLEDVIAEAVDQQVDLIIAHHPPLYRPLKQLLT
DDGHGRMIAACVKHDIAVYAAHTNLDVAAGGLNDWLAEALGLHETTVLVPTYTEALKKLVVYVPTSHAEAVRAAIGDAGA
GHIGRYSHCTFNSRGIGTFLPEEGAQPFIGEQGRLEEVEEVRIETIVPASLERQVIEAMLAAHPYEEVAYDIYPLDNEGR
RFGLGRIGRLPQPVTLRAFAEQVKTAFSVPAVRVVGRLDDLVQTVAVLGGDGNKFVAAAASAGADVYVTGDVYYHTAHDA
QALGLHLVDPGHNVEKVMKQGVARYLTAELTKRQWEAEVIVSNVHTDPFQFV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Homo sapiens, GI215272360, Length=377, Percent_Identity=23.342175066313, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI56605983, Length=377, Percent_Identity=23.342175066313, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI209862879, Length=377, Percent_Identity=23.342175066313, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI215272362, Length=115, Percent_Identity=29.5652173913043, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI19921430, Length=115, Percent_Identity=38.2608695652174, Blast_Score=100, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 40604; Mature: 40473

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIPYGYEVIQLFEQLAPKSLAMEGDRIGLQIGTLNKPVKKVMVALDVLEDVIAEAVDQ
CCCCCCCHHHHHHHHHHCCHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC
QVDLIIAHHPPLYRPLKQLLTDDGHGRMIAACVKHDIAVYAAHTNLDVAAGGLNDWLAEA
CEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHCCEEEEEEECCCEEECCCHHHHHHHH
LGLHETTVLVPTYTEALKKLVVYVPTSHAEAVRAAIGDAGAGHIGRYSHCTFNSRGIGTF
HCCCCEEEEECCHHHHHHHHEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
LPEEGAQPFIGEQGRLEEVEEVRIETIVPASLERQVIEAMLAAHPYEEVAYDIYPLDNEG
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHEEEEEECCCCC
RRFGLGRIGRLPQPVTLRAFAEQVKTAFSVPAVRVVGRLDDLVQTVAVLGGDGNKFVAAA
CEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
ASAGADVYVTGDVYYHTAHDAQALGLHLVDPGHNVEKVMKQGVARYLTAELTKRQWEAEV
CCCCCEEEEECCEEEEECCCCHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IVSNVHTDPFQFV
EEECCCCCCCCCC
>Mature Secondary Structure 
SRIPYGYEVIQLFEQLAPKSLAMEGDRIGLQIGTLNKPVKKVMVALDVLEDVIAEAVDQ
CCCCCCHHHHHHHHHHCCHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC
QVDLIIAHHPPLYRPLKQLLTDDGHGRMIAACVKHDIAVYAAHTNLDVAAGGLNDWLAEA
CEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHCCEEEEEEECCCEEECCCHHHHHHHH
LGLHETTVLVPTYTEALKKLVVYVPTSHAEAVRAAIGDAGAGHIGRYSHCTFNSRGIGTF
HCCCCEEEEECCHHHHHHHHEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
LPEEGAQPFIGEQGRLEEVEEVRIETIVPASLERQVIEAMLAAHPYEEVAYDIYPLDNEG
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHEEEEEECCCCC
RRFGLGRIGRLPQPVTLRAFAEQVKTAFSVPAVRVVGRLDDLVQTVAVLGGDGNKFVAAA
CEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
ASAGADVYVTGDVYYHTAHDAQALGLHLVDPGHNVEKVMKQGVARYLTAELTKRQWEAEV
CCCCCEEEEECCEEEEECCCCHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IVSNVHTDPFQFV
EEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]