Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
---|---|
Accession | NC_009328 |
Length | 3,550,319 |
Click here to switch to the map view.
The map label for this gene is pstS [H]
Identifier: 138896034
GI number: 138896034
Start: 2507037
End: 2507999
Strand: Reverse
Name: pstS [H]
Synonym: GTNG_2397
Alternate gene names: 138896034
Gene position: 2507999-2507037 (Counterclockwise)
Preceding gene: 138896035
Following gene: 138896033
Centisome position: 70.64
GC content: 47.14
Gene sequence:
>963_bases ATGAACAAATGGAAACGGCTCATGTTGTCCGGTGTGCTCAGCGGGATGATGGTGTTCGTTGCCGCCTGTGGCGGAGGGAA CAAAGCAGGGGGAAATGATGCCGAAGGTGAGTCTGCATCGGAACTGTCAGGCGAAGTAATCATGGATGGCTCTTCGACTG TCTATCCGATTGCGGAGGCAGCCGCTGAAGAATATATGACTGAACAGCCGAATGTGAAAGTGTCTGTCGGCATGTCGGGA ACGGGCGGTGGATTTGAAAAATTCAGCAAAGGGGAAAGCGATTTTTCAAACGCTTCCCGTCCGATCAAAGAGGAAGAGAA ACAAGCAGCCGCTGCCAACGACATCGAATTTCAAGAGTTTCAACTCGCTTATGATGGGCTTTCTGTCGTTGTCAATAAAG AAAACGACTGGGTTGACTACTTGACGGTAGATGAGCTGAAAAAAATGTGGACGGAAGACGGCAAGGAGAAAAAATGGTCG GATATCCGCTCGGGATGGCCGGATGAGGAAATTCAATTTTTCTCGCCTGGTCATGATTCCGGAACGTACGACTACTTTGA TGAAGTGATTCTTGAAGGAAAAGAAATGGTCAAAACCGCTCAACTTTCTGAGGACGATAATATCCTCGTTCGTGGAGTCG AAGGGGATCGATACGCGATTGGTTACTTCGGCTATGCGTATTACTTGGAAAATAAAGATAAGCTGAAGATTGTGCCAATC GATGCCGGCAACGGTCCGATCGAGCCAACGAACGAGACGATTGAGACGGGAAAATATACTCCGCTTTCGCGTCCGCTATT TACGTATGTGAACGTCAAATCTTTGAAAGAAAAACCGCAAGTGTATGATTATATGGAGTTCTTGTTGGAAACAGCTGGGG ATTTAGCCGAAGAAGTCGGTTATGTCCGCCTGCCGGAGGAAAAGTATAAGGAACAACTTGAAACGTTGCAAGGGTTGAAA TAA
Upstream 100 bases:
>100_bases TGGAGTTTATATTATTTTAACATTCCGTTTAAACCTCGTTAATAGCCTTCACTTATGATAGGACATGTAAGAGAAAACGA ATGGTGTATGGGGAAAAACC
Downstream 100 bases:
>100_bases GTTTCGTTAGGCCGGCGACAACGGATGTCTGTCGGCCTAGACTTGTGACTGCGGTTGGAATATGTCGGAAAGGAGTTTTC GATTTATGGGGATTCCAACG
Product: phosphate-binding protein
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MNKWKRLMLSGVLSGMMVFVAACGGGNKAGGNDAEGESASELSGEVIMDGSSTVYPIAEAAAEEYMTEQPNVKVSVGMSG TGGGFEKFSKGESDFSNASRPIKEEEKQAAAANDIEFQEFQLAYDGLSVVVNKENDWVDYLTVDELKKMWTEDGKEKKWS DIRSGWPDEEIQFFSPGHDSGTYDYFDEVILEGKEMVKTAQLSEDDNILVRGVEGDRYAIGYFGYAYYLENKDKLKIVPI DAGNGPIEPTNETIETGKYTPLSRPLFTYVNVKSLKEKPQVYDYMEFLLETAGDLAEEVGYVRLPEEKYKEQLETLQGLK
Sequences:
>Translated_320_residues MNKWKRLMLSGVLSGMMVFVAACGGGNKAGGNDAEGESASELSGEVIMDGSSTVYPIAEAAAEEYMTEQPNVKVSVGMSG TGGGFEKFSKGESDFSNASRPIKEEEKQAAAANDIEFQEFQLAYDGLSVVVNKENDWVDYLTVDELKKMWTEDGKEKKWS DIRSGWPDEEIQFFSPGHDSGTYDYFDEVILEGKEMVKTAQLSEDDNILVRGVEGDRYAIGYFGYAYYLENKDKLKIVPI DAGNGPIEPTNETIETGKYTPLSRPLFTYVNVKSLKEKPQVYDYMEFLLETAGDLAEEVGYVRLPEEKYKEQLETLQGLK >Mature_320_residues MNKWKRLMLSGVLSGMMVFVAACGGGNKAGGNDAEGESASELSGEVIMDGSSTVYPIAEAAAEEYMTEQPNVKVSVGMSG TGGGFEKFSKGESDFSNASRPIKEEEKQAAAANDIEFQEFQLAYDGLSVVVNKENDWVDYLTVDELKKMWTEDGKEKKWS DIRSGWPDEEIQFFSPGHDSGTYDYFDEVILEGKEMVKTAQLSEDDNILVRGVEGDRYAIGYFGYAYYLENKDKLKIVPI DAGNGPIEPTNETIETGKYTPLSRPLFTYVNVKSLKEKPQVYDYMEFLLETAGDLAEEVGYVRLPEEKYKEQLETLQGLK
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35638; Mature: 35638
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKWKRLMLSGVLSGMMVFVAACGGGNKAGGNDAEGESASELSGEVIMDGSSTVYPIAEA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCCHHHHHH AAEEYMTEQPNVKVSVGMSGTGGGFEKFSKGESDFSNASRPIKEEEKQAAAANDIEFQEF HHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCCHHHHCCCCCHHHHHHHHHCCCCCHHHH QLAYDGLSVVVNKENDWVDYLTVDELKKMWTEDGKEKKWSDIRSGWPDEEIQFFSPGHDS HEEECCEEEEEECCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCCC GTYDYFDEVILEGKEMVKTAQLSEDDNILVRGVEGDRYAIGYFGYAYYLENKDKLKIVPI CCHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCEEEEEEEEEEEEECCCCCEEEEEE DAGNGPIEPTNETIETGKYTPLSRPLFTYVNVKSLKEKPQVYDYMEFLLETAGDLAEEVG ECCCCCCCCCCCHHHCCCCCCCCCCHHHHEEHHHHHCCCHHHHHHHHHHHHHHHHHHHCC YVRLPEEKYKEQLETLQGLK EEECCHHHHHHHHHHHHCCC >Mature Secondary Structure MNKWKRLMLSGVLSGMMVFVAACGGGNKAGGNDAEGESASELSGEVIMDGSSTVYPIAEA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCCHHHHHH AAEEYMTEQPNVKVSVGMSGTGGGFEKFSKGESDFSNASRPIKEEEKQAAAANDIEFQEF HHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCCHHHHCCCCCHHHHHHHHHCCCCCHHHH QLAYDGLSVVVNKENDWVDYLTVDELKKMWTEDGKEKKWSDIRSGWPDEEIQFFSPGHDS HEEECCEEEEEECCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCCC GTYDYFDEVILEGKEMVKTAQLSEDDNILVRGVEGDRYAIGYFGYAYYLENKDKLKIVPI CCHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCEEEEEEEEEEEEECCCCCEEEEEE DAGNGPIEPTNETIETGKYTPLSRPLFTYVNVKSLKEKPQVYDYMEFLLETAGDLAEEVG ECCCCCCCCCCCHHHCCCCCCCCCCHHHHEEHHHHHCCCHHHHHHHHHHHHHHHHHHHCC YVRLPEEKYKEQLETLQGLK EEECCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA