Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
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Accession | NC_009328 |
Length | 3,550,319 |
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The map label for this gene is phoU [H]
Identifier: 138896030
GI number: 138896030
Start: 2503564
End: 2504217
Strand: Reverse
Name: phoU [H]
Synonym: GTNG_2393
Alternate gene names: 138896030
Gene position: 2504217-2503564 (Counterclockwise)
Preceding gene: 138896031
Following gene: 138896027
Centisome position: 70.53
GC content: 49.39
Gene sequence:
>654_bases ATGCGTGAAACGTTTGCTGATGATTTACGGGCGTTGCATAACAAGCTGATCGAAATGGGACGGTTAACAGAAGTGGCATT GCAACAGGCGATTGAATCGTTTCAAACGCAAAACAAAAAGTTGGCGATGGCGGTCATTGACGGAGACGGTTCAATTGATA AGCTCGAGGAGGAAGTGAATGATTTCGCATTATGGCTCATTGCGAAACAGCAGCCGGTCGCGACTGATTTGCGCCGTATC GTCGCCGCAATCAAAATTGCGAGCGATATCGAACGAATCGCCGATTTTGCTGTGAATATCGCTAAGGCATGCATCCGCAT CGGCGGCCAGCCGTTTGTGATTGATATTCGCCCGTTCGTGTTGATGCATCGCCTGGCCACAGACATGGTATCGACGGTGA TTGCTGCGTACGATCAGGAAGATGTGTCGTTGGCTGCACAAATTGCCGATATGGACCATCAAGTCGATGAACAGTACGGA GAACTGATGAAGTCGTTGCTTGAGATGGAGAAAACGGACAAAGAGGCGCTGGCGCAAATGAACGTGCTTGCCCTCGTCGC TCGATATATGGAGCGGACGGCGGATCATGCGACCAATATTGCTGAACATCTCATTTACCTTGTCAAAGGGAAGCATTACG ACTTGAATGACTGA
Upstream 100 bases:
>100_bases ACGCAGAGACGAGCAAGCTGTTTTCGAATCCTGCCGACCGGCGTACGGAAGATTACATTACCGGCCGTTTCGGGTAAAAA CAAAGGAGGCAAGCAAAGAA
Downstream 100 bases:
>100_bases CAGTATAAATGTAAGGAGGCGTCCTGGTAGGCGCCTCCTTTTGGCTGAATTATGGGCTGGTAATGAGGCGGCTGATCGCC GCATAATCCATATCGCTGCG
Product: phosphate transporter PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MRETFADDLRALHNKLIEMGRLTEVALQQAIESFQTQNKKLAMAVIDGDGSIDKLEEEVNDFALWLIAKQQPVATDLRRI VAAIKIASDIERIADFAVNIAKACIRIGGQPFVIDIRPFVLMHRLATDMVSTVIAAYDQEDVSLAAQIADMDHQVDEQYG ELMKSLLEMEKTDKEALAQMNVLALVARYMERTADHATNIAEHLIYLVKGKHYDLND
Sequences:
>Translated_217_residues MRETFADDLRALHNKLIEMGRLTEVALQQAIESFQTQNKKLAMAVIDGDGSIDKLEEEVNDFALWLIAKQQPVATDLRRI VAAIKIASDIERIADFAVNIAKACIRIGGQPFVIDIRPFVLMHRLATDMVSTVIAAYDQEDVSLAAQIADMDHQVDEQYG ELMKSLLEMEKTDKEALAQMNVLALVARYMERTADHATNIAEHLIYLVKGKHYDLND >Mature_217_residues MRETFADDLRALHNKLIEMGRLTEVALQQAIESFQTQNKKLAMAVIDGDGSIDKLEEEVNDFALWLIAKQQPVATDLRRI VAAIKIASDIERIADFAVNIAKACIRIGGQPFVIDIRPFVLMHRLATDMVSTVIAAYDQEDVSLAAQIADMDHQVDEQYG ELMKSLLEMEKTDKEALAQMNVLALVARYMERTADHATNIAEHLIYLVKGKHYDLND
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=212, Percent_Identity=27.8301886792453, Blast_Score=100, Evalue=9e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 24412; Mature: 24412
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRETFADDLRALHNKLIEMGRLTEVALQQAIESFQTQNKKLAMAVIDGDGSIDKLEEEVN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHH DFALWLIAKQQPVATDLRRIVAAIKIASDIERIADFAVNIAKACIRIGGQPFVIDIRPFV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHH LMHRLATDMVSTVIAAYDQEDVSLAAQIADMDHQVDEQYGELMKSLLEMEKTDKEALAQM HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH NVLALVARYMERTADHATNIAEHLIYLVKGKHYDLND HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRETFADDLRALHNKLIEMGRLTEVALQQAIESFQTQNKKLAMAVIDGDGSIDKLEEEVN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHH DFALWLIAKQQPVATDLRRIVAAIKIASDIERIADFAVNIAKACIRIGGQPFVIDIRPFV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHH LMHRLATDMVSTVIAAYDQEDVSLAAQIADMDHQVDEQYGELMKSLLEMEKTDKEALAQM HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH NVLALVARYMERTADHATNIAEHLIYLVKGKHYDLND HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA