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The map label for this gene is ydbA [H]

Identifier: 138895731

GI number: 138895731

Start: 2221556

End: 2222338

Strand: Direct

Name: ydbA [H]

Synonym: GTNG_2087

Alternate gene names: 138895731

Gene position: 2221556-2222338 (Clockwise)

Preceding gene: 138895726

Following gene: 138895738

Centisome position: 62.57

GC content: 49.94

Gene sequence:

>783_bases
ATGGAAGCTCGACAAACGCTGAAACAAGAACTTGACGCCATCACTGCTTGGGAACGTTCCCAAAAAGACCTTTGGTTTTG
GGAAAAGCTCGGCCGCTTGCCGTTTCAAGTGCTCGACAAGCTGACGCCAAAAATTGTTCATCGAAAGCTCGGGCAATTGC
TCGACGAATTAGGAAGCTATATTCAAAACGGCGGGAAATACTTAGTGAAGAAAGAGAACATATTGGAACGTCTTGGTGTC
ACGTCGTTCGAGGAAGTGCCGTATTTGCCGCTTGAGACCATGGATCGCGTGTGCGATGAGTTGATCGCGGCGCGCGTGAC
GTTCGCACAGCTGCAAGGAGCAGCGACTGGGGTTGGCGGGGCGTTGACGCTGGCGGTAGACATCCCTTCTTTGCTTGGGC
TCGCGTTGAAAACACTGCAAGAGATCGCCATCGTATACGGATACGACCCAAACGAAAAACAAGAGCGCGTGTTTGTTGTC
AAATGCTTGCAGTTTGCCGCGGCGGACATCGTCGGAAAAAAAGCGATTTTAGACGAAATTTCTTCATTTTCCAGTCAGCG
TGAGCATGTCTTTTCCGAGCTGCAAGGCTGGCGGGAAGTGATGATGACGTTCCGCGACCAATACGGATGGAAAAAGCTGT
TCCAAGCTGTGCCAATCATCGGCGTCATCTTCGGTTCGCTGTTTAACAAATCGTTTATGGAAGACATCGCTGAAACTGGG
AAGATGCTTTATCGAAAGCGCCGCATCATCGAGAAGCTCAAACAATTTGAACCCGATGTCTAA

Upstream 100 bases:

>100_bases
AAATATTTTATTTAAAATCAATTGTGAAACACGATCTTTTTTTATACGTATAAACATTCGAGTATTGATTCACCTTATTT
ATTAAAGGAGGCGGAACGGA

Downstream 100 bases:

>100_bases
ACGACAACGGGTTCGATTCGTTTAGGTTGGTGCATAGGCTCCAGCGAGAACATCTCTTCATCGTTGAACAGCTTTCAATC
GCCACATCATGCTAATGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MEARQTLKQELDAITAWERSQKDLWFWEKLGRLPFQVLDKLTPKIVHRKLGQLLDELGSYIQNGGKYLVKKENILERLGV
TSFEEVPYLPLETMDRVCDELIAARVTFAQLQGAATGVGGALTLAVDIPSLLGLALKTLQEIAIVYGYDPNEKQERVFVV
KCLQFAAADIVGKKAILDEISSFSSQREHVFSELQGWREVMMTFRDQYGWKKLFQAVPIIGVIFGSLFNKSFMEDIAETG
KMLYRKRRIIEKLKQFEPDV

Sequences:

>Translated_260_residues
MEARQTLKQELDAITAWERSQKDLWFWEKLGRLPFQVLDKLTPKIVHRKLGQLLDELGSYIQNGGKYLVKKENILERLGV
TSFEEVPYLPLETMDRVCDELIAARVTFAQLQGAATGVGGALTLAVDIPSLLGLALKTLQEIAIVYGYDPNEKQERVFVV
KCLQFAAADIVGKKAILDEISSFSSQREHVFSELQGWREVMMTFRDQYGWKKLFQAVPIIGVIFGSLFNKSFMEDIAETG
KMLYRKRRIIEKLKQFEPDV
>Mature_260_residues
MEARQTLKQELDAITAWERSQKDLWFWEKLGRLPFQVLDKLTPKIVHRKLGQLLDELGSYIQNGGKYLVKKENILERLGV
TSFEEVPYLPLETMDRVCDELIAARVTFAQLQGAATGVGGALTLAVDIPSLLGLALKTLQEIAIVYGYDPNEKQERVFVV
KCLQFAAADIVGKKAILDEISSFSSQREHVFSELQGWREVMMTFRDQYGWKKLFQAVPIIGVIFGSLFNKSFMEDIAETG
KMLYRKRRIIEKLKQFEPDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29723; Mature: 29723

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]