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The map label for this gene is yesN [H]

Identifier: 138895454

GI number: 138895454

Start: 1909484

End: 1910686

Strand: Reverse

Name: yesN [H]

Synonym: GTNG_1802

Alternate gene names: 138895454

Gene position: 1910686-1909484 (Counterclockwise)

Preceding gene: 138895455

Following gene: 138895453

Centisome position: 53.82

GC content: 43.72

Gene sequence:

>1203_bases
ATGTGGAAAGTGCTAATTGCGGATGATGAGATGATTATTCGTGAAGGAATTCGAGAATCGATCGACTGGGCTCAATTCAA
TATGGAAGTGATCGCGGAAGCGGAAGATGGGGAAGAGGCGCTAGAATTAGCGATAAAACATGAAGTGCACGTATTATTTG
TAGATTTGAGCATGCCGATTATGGACGGGCTGACACTTATGAAACATGTGCGAGAGAGGCTGCCGCACTGCCATATGATC
GTGATTACTGGTTACGATGAGTTTTCATATGCGCAAGAAGCACTCCGTCTCCAGGTGGATGATTACTTGTTAAAACCAAC
GGACCCAAAGCAATTGCGCGAAGTAGTGGCGAAGGTGAAAGAGAAACTTGAACGTGAGCATCAGGAGAGAGGATATGTAG
AGCTATTAACGAGTCAAGTACAAAAAAATGTCGGGTTGCTTCGCCAGCAATTAGGAGTCGAATGGGTAGAAGGAAGATTG
AGGGAAGAGGAAATGATGAGACAGTTGCCTTTGCTTGGCCTTCCATCATTTTGTCCTGTTCAAGTTGTTGTCATTCAATG
GTTCTCGTTTAAAAATCAACCCATTATGAACGATCGGGATCGATACATTCTTTTGTTTGCGATAGAAAACATCGTGTCTG
AATTGTTGGTGAATCATGAAATGTTGGTTTTTCGCGATTCAAATGGGTTCGTTGTTGTCATAGTTTGGACACCGATTAGT
GAAGAACAGCGTAGGGGGATTGAAGCCGCATTAAAGCAATATTTGTACATTGGAGCTAGCGCTTATATGGAAATGGTAGA
GGGAGGGGTGACCGGGGTGATTTCGGCGTATGAAAAATGTAAGAGGAAGATGGAGGAAGAAAAGCGTCTTTCTCCGGTTG
TCCGCCGCGCCAAACAGTATATACAGACACATTTTAGCCAGTCAGAACTGACACTTGAGTCGGTTGCTCAATTTCTCAAT
GTCTCTCCCATTTACCTGAGCCGAATGATCAAGCAAGAGCTAGGCATTTCTTTTGTTCACTTATTGACGAAAATTCGACT
GACGAAGGCGGTTGAGCTACTTTTATCTACGGAACTACCTATTCACGAAATTGCTGAGCGAGTCGGCTATGATACACAAC
ATTATTTTAGCACGGCCTTTAAAAAAGCGATGGGAGTGCCTCCAAACCAATATCGGAAGATACATCTAGAACGTGAGGCA
TAG

Upstream 100 bases:

>100_bases
CCGTCTTATCGGTTGTATATTGACAGTGAAGAAGGGAAAGGAACGACCGTGATGATTGTGCATCCAATGATCATGAACCT
CTCCTAGGAGGGACGAAGAA

Downstream 100 bases:

>100_bases
CTAGTAGCAAAACAGATCACGTTTTCTTTTTGCGGGAGCTGACCTCAAAAGCCGCCTGCCTTCCACAGACATACTAGATA
TCGATTCAAGGAAGATTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MWKVLIADDEMIIREGIRESIDWAQFNMEVIAEAEDGEEALELAIKHEVHVLFVDLSMPIMDGLTLMKHVRERLPHCHMI
VITGYDEFSYAQEALRLQVDDYLLKPTDPKQLREVVAKVKEKLEREHQERGYVELLTSQVQKNVGLLRQQLGVEWVEGRL
REEEMMRQLPLLGLPSFCPVQVVVIQWFSFKNQPIMNDRDRYILLFAIENIVSELLVNHEMLVFRDSNGFVVVIVWTPIS
EEQRRGIEAALKQYLYIGASAYMEMVEGGVTGVISAYEKCKRKMEEEKRLSPVVRRAKQYIQTHFSQSELTLESVAQFLN
VSPIYLSRMIKQELGISFVHLLTKIRLTKAVELLLSTELPIHEIAERVGYDTQHYFSTAFKKAMGVPPNQYRKIHLEREA

Sequences:

>Translated_400_residues
MWKVLIADDEMIIREGIRESIDWAQFNMEVIAEAEDGEEALELAIKHEVHVLFVDLSMPIMDGLTLMKHVRERLPHCHMI
VITGYDEFSYAQEALRLQVDDYLLKPTDPKQLREVVAKVKEKLEREHQERGYVELLTSQVQKNVGLLRQQLGVEWVEGRL
REEEMMRQLPLLGLPSFCPVQVVVIQWFSFKNQPIMNDRDRYILLFAIENIVSELLVNHEMLVFRDSNGFVVVIVWTPIS
EEQRRGIEAALKQYLYIGASAYMEMVEGGVTGVISAYEKCKRKMEEEKRLSPVVRRAKQYIQTHFSQSELTLESVAQFLN
VSPIYLSRMIKQELGISFVHLLTKIRLTKAVELLLSTELPIHEIAERVGYDTQHYFSTAFKKAMGVPPNQYRKIHLEREA
>Mature_400_residues
MWKVLIADDEMIIREGIRESIDWAQFNMEVIAEAEDGEEALELAIKHEVHVLFVDLSMPIMDGLTLMKHVRERLPHCHMI
VITGYDEFSYAQEALRLQVDDYLLKPTDPKQLREVVAKVKEKLEREHQERGYVELLTSQVQKNVGLLRQQLGVEWVEGRL
REEEMMRQLPLLGLPSFCPVQVVVIQWFSFKNQPIMNDRDRYILLFAIENIVSELLVNHEMLVFRDSNGFVVVIVWTPIS
EEQRRGIEAALKQYLYIGASAYMEMVEGGVTGVISAYEKCKRKMEEEKRLSPVVRRAKQYIQTHFSQSELTLESVAQFLN
VSPIYLSRMIKQELGISFVHLLTKIRLTKAVELLLSTELPIHEIAERVGYDTQHYFSTAFKKAMGVPPNQYRKIHLEREA

Specific function: Member of the two-component regulatory system yesM/yesN [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786251, Length=99, Percent_Identity=41.4141414141414, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1788725, Length=93, Percent_Identity=35.4838709677419, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1788521, Length=115, Percent_Identity=33.0434782608696, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1787487, Length=115, Percent_Identity=34.7826086956522, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1789993, Length=117, Percent_Identity=30.7692307692308, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788546, Length=122, Percent_Identity=31.9672131147541, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1789402, Length=127, Percent_Identity=29.9212598425197, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87082052, Length=130, Percent_Identity=33.8461538461538, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018060
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00165 HTH_AraC; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 46531; Mature: 46531

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKVLIADDEMIIREGIRESIDWAQFNMEVIAEAEDGEEALELAIKHEVHVLFVDLSMPI
CEEEEECCCHHHHHHHHHHHCCHHHHCHHHEEECCCCHHHHHHHHHHCEEEEEEECCCHH
MDGLTLMKHVRERLPHCHMIVITGYDEFSYAQEALRLQVDDYLLKPTDPKQLREVVAKVK
HHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHH
EKLEREHQERGYVELLTSQVQKNVGLLRQQLGVEWVEGRLREEEMMRQLPLLGLPSFCPV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHCCCCCCCCCCHH
QVVVIQWFSFKNQPIMNDRDRYILLFAIENIVSELLVNHEMLVFRDSNGFVVVIVWTPIS
HHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCCC
EEQRRGIEAALKQYLYIGASAYMEMVEGGVTGVISAYEKCKRKMEEEKRLSPVVRRAKQY
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQTHFSQSELTLESVAQFLNVSPIYLSRMIKQELGISFVHLLTKIRLTKAVELLLSTELP
HHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCC
IHEIAERVGYDTQHYFSTAFKKAMGVPPNQYRKIHLEREA
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHEEEEEECCC
>Mature Secondary Structure
MWKVLIADDEMIIREGIRESIDWAQFNMEVIAEAEDGEEALELAIKHEVHVLFVDLSMPI
CEEEEECCCHHHHHHHHHHHCCHHHHCHHHEEECCCCHHHHHHHHHHCEEEEEEECCCHH
MDGLTLMKHVRERLPHCHMIVITGYDEFSYAQEALRLQVDDYLLKPTDPKQLREVVAKVK
HHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHH
EKLEREHQERGYVELLTSQVQKNVGLLRQQLGVEWVEGRLREEEMMRQLPLLGLPSFCPV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHCCCCCCCCCCHH
QVVVIQWFSFKNQPIMNDRDRYILLFAIENIVSELLVNHEMLVFRDSNGFVVVIVWTPIS
HHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCCC
EEQRRGIEAALKQYLYIGASAYMEMVEGGVTGVISAYEKCKRKMEEEKRLSPVVRRAKQY
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQTHFSQSELTLESVAQFLNVSPIYLSRMIKQELGISFVHLLTKIRLTKAVELLLSTELP
HHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCC
IHEIAERVGYDTQHYFSTAFKKAMGVPPNQYRKIHLEREA
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]