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The map label for this gene is yjhC [C]

Identifier: 138895442

GI number: 138895442

Start: 1893751

End: 1894746

Strand: Reverse

Name: yjhC [C]

Synonym: GTNG_1790

Alternate gene names: 138895442

Gene position: 1894746-1893751 (Counterclockwise)

Preceding gene: 138895443

Following gene: 138895441

Centisome position: 53.37

GC content: 49.2

Gene sequence:

>996_bases
ATGGAACATAAAGTCCGCTTTGGTATTATGAGTACAGCCGCCATTGCCAAAGACGCTATGATTCCGGCCATTCGCCGGGC
GGATCACGCTGAAGTCGTGGCGATCGCCAGCGAAAGCGGGAAAGCCAGCCAAGTGGCACGGGAGCTCGGCATTCCAAAGG
CGTATGACAACTACGAACAGCTGCTTGATGATCCGGACATCGACGCAGTGTACATTCCGCTTCCGAACAGCCTGCACGCT
GAATGGACGATCAAAGCGGCAAAGAAGAAAAAACATGTGCTTTGCGAAAAACCGGCTGCCTTATGTGAAGAGGATGTCCG
ACGCATGATCGAGGCGTGCGGGAAAAACGGTGTTTTATTCATGGAAGCATTTATGTACCAGTTTCATCCGCAGCATGAGC
GAGTGAAGCAGCTTTTAGCTGCTGGGGAGATTGGCGACATCAAGTATATGCGTGCCCATTTCTCTTTTTACTTGCAAGAC
CGGGAAACGAATATCCGTATGAACCATGAGCTTGGCGGGGGAAGCTTGTTTGATGTCGGTTGCTATTGCGTGCACTCGAC
AAGACACATCCTTGACGCCGAACCAATCGAATTATTCGTTCAATCCTATTTTGATCCGCACCGTTCGGTCGATTTAACGA
CGAATGGTTGGATGAGTATGGAAAACGGTGTTCTCGCCCAGTTCACGTGCAGTTTTGATATGTTTCCACAAAATGAATAT
GAAGTGGTTGGCACAAAGGGAAAAATCGTTGTCTCGCGGGCGTACCGTCCAGATGTCAATGAAGGTGAGGGGCGGATTAC
GGTTGTGACTGACGATGGAAATATAAGAGAAGAAACAGTGCCAGGTGATCAATACACGTTGCAAATCGAACACTTTTCGC
GCGGCATTCTTGAAGGTTTACCGCTGTTGTATTCGTCGGAACAAATGATCAAACAGGCGCGGGCGCTTGACGCTTGCCGC
ACATCGATGGAGACAGGAAATATTGTACGGTTATAA

Upstream 100 bases:

>100_bases
AGTTATCGTGGAATGTCATCCGTTTAGGAAAACGATAAGGAAATGAAGGCTGGTCTGAGGGCCAGCCTCTCCCATTGCAA
ACAGGAAGGAGAGACGAAAC

Downstream 100 bases:

>100_bases
GGGAGCAAAGTTCACAGAGATATTACATACTTATATACGAAGGCAAAGAAGAGGGGGATGCCGGTGACGGATGAAATTGA
AGGTGTGTTGATTGATTTGG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MEHKVRFGIMSTAAIAKDAMIPAIRRADHAEVVAIASESGKASQVARELGIPKAYDNYEQLLDDPDIDAVYIPLPNSLHA
EWTIKAAKKKKHVLCEKPAALCEEDVRRMIEACGKNGVLFMEAFMYQFHPQHERVKQLLAAGEIGDIKYMRAHFSFYLQD
RETNIRMNHELGGGSLFDVGCYCVHSTRHILDAEPIELFVQSYFDPHRSVDLTTNGWMSMENGVLAQFTCSFDMFPQNEY
EVVGTKGKIVVSRAYRPDVNEGEGRITVVTDDGNIREETVPGDQYTLQIEHFSRGILEGLPLLYSSEQMIKQARALDACR
TSMETGNIVRL

Sequences:

>Translated_331_residues
MEHKVRFGIMSTAAIAKDAMIPAIRRADHAEVVAIASESGKASQVARELGIPKAYDNYEQLLDDPDIDAVYIPLPNSLHA
EWTIKAAKKKKHVLCEKPAALCEEDVRRMIEACGKNGVLFMEAFMYQFHPQHERVKQLLAAGEIGDIKYMRAHFSFYLQD
RETNIRMNHELGGGSLFDVGCYCVHSTRHILDAEPIELFVQSYFDPHRSVDLTTNGWMSMENGVLAQFTCSFDMFPQNEY
EVVGTKGKIVVSRAYRPDVNEGEGRITVVTDDGNIREETVPGDQYTLQIEHFSRGILEGLPLLYSSEQMIKQARALDACR
TSMETGNIVRL
>Mature_331_residues
MEHKVRFGIMSTAAIAKDAMIPAIRRADHAEVVAIASESGKASQVARELGIPKAYDNYEQLLDDPDIDAVYIPLPNSLHA
EWTIKAAKKKKHVLCEKPAALCEEDVRRMIEACGKNGVLFMEAFMYQFHPQHERVKQLLAAGEIGDIKYMRAHFSFYLQD
RETNIRMNHELGGGSLFDVGCYCVHSTRHILDAEPIELFVQSYFDPHRSVDLTTNGWMSMENGVLAQFTCSFDMFPQNEY
EVVGTKGKIVVSRAYRPDVNEGEGRITVVTDDGNIREETVPGDQYTLQIEHFSRGILEGLPLLYSSEQMIKQARALDACR
TSMETGNIVRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=247, Percent_Identity=30.3643724696356, Blast_Score=122, Evalue=4e-28,
Organism=Escherichia coli, GI87082405, Length=121, Percent_Identity=38.0165289256198, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI145693182, Length=187, Percent_Identity=28.3422459893048, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1787574, Length=189, Percent_Identity=25.3968253968254, Blast_Score=66, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24581117, Length=290, Percent_Identity=28.9655172413793, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24581115, Length=258, Percent_Identity=24.031007751938, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24584727, Length=255, Percent_Identity=24.3137254901961, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37308; Mature: 37308

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHKVRFGIMSTAAIAKDAMIPAIRRADHAEVVAIASESGKASQVARELGIPKAYDNYEQ
CCCEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCHHH
LLDDPDIDAVYIPLPNSLHAEWTIKAAKKKKHVLCEKPAALCEEDVRRMIEACGKNGVLF
HCCCCCCCEEEEECCCCCCCEEEEEEHHCCCCCHHCCHHHHHHHHHHHHHHHHCCCCEEH
MEAFMYQFHPQHERVKQLLAAGEIGDIKYMRAHFSFYLQDRETNIRMNHELGGGSLFDVG
HHHHHHHHCCHHHHHHHHHHCCCCCCHHHHEEEEEEEEEECCCCEEEEEECCCCCEEEEE
CYCVHSTRHILDAEPIELFVQSYFDPHRSVDLTTNGWMSMENGVLAQFTCSFDMFPQNEY
EEEEECCHHHCCCHHHHHHHHHHCCCCCEEEEECCCCEECCCCEEEEEEEEEECCCCCCE
EVVGTKGKIVVSRAYRPDVNEGEGRITVVTDDGNIREETVPGDQYTLQIEHFSRGILEGL
EEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHCC
PLLYSSEQMIKQARALDACRTSMETGNIVRL
CCEECCHHHHHHHHHHHHHHHHCCCCCEEEC
>Mature Secondary Structure
MEHKVRFGIMSTAAIAKDAMIPAIRRADHAEVVAIASESGKASQVARELGIPKAYDNYEQ
CCCEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCHHH
LLDDPDIDAVYIPLPNSLHAEWTIKAAKKKKHVLCEKPAALCEEDVRRMIEACGKNGVLF
HCCCCCCCEEEEECCCCCCCEEEEEEHHCCCCCHHCCHHHHHHHHHHHHHHHHCCCCEEH
MEAFMYQFHPQHERVKQLLAAGEIGDIKYMRAHFSFYLQDRETNIRMNHELGGGSLFDVG
HHHHHHHHCCHHHHHHHHHHCCCCCCHHHHEEEEEEEEEECCCCEEEEEECCCCCEEEEE
CYCVHSTRHILDAEPIELFVQSYFDPHRSVDLTTNGWMSMENGVLAQFTCSFDMFPQNEY
EEEEECCHHHCCCHHHHHHHHHHCCCCCEEEEECCCCEECCCCEEEEEEEEEECCCCCCE
EVVGTKGKIVVSRAYRPDVNEGEGRITVVTDDGNIREETVPGDQYTLQIEHFSRGILEGL
EEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHCC
PLLYSSEQMIKQARALDACRTSMETGNIVRL
CCEECCHHHHHHHHHHHHHHHHCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]