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The map label for this gene is glpQ [H]

Identifier: 138895357

GI number: 138895357

Start: 1790262

End: 1791140

Strand: Direct

Name: glpQ [H]

Synonym: GTNG_1701

Alternate gene names: 138895357

Gene position: 1790262-1791140 (Clockwise)

Preceding gene: 138895336

Following gene: 138895360

Centisome position: 50.43

GC content: 55.52

Gene sequence:

>879_bases
ATGACGTTGCATCGAATATGGCTTTATGTCTCATTCTTGGTATGGTTGCCGCTAGGCTTAGCCTCCTCTGCTGCTCCACA
ACAGCCGTCTGTCACCCGCGAGCCGATCATCATCGCCCATCGCGGTGCTTCCGGACATGCACCGGAGCATACACTTGCCT
CCTACCGGCTTGCCGCCCGCATGCACGCTGATTATATTGAGGTTGACGTGCGCATGACGAAAGACGGAAAACTCATCGCC
ATGCATGATGCAACACTCGCCCGAACGACGAATGCCGAAACCGTCTACCCTCGCCGTTCTCCGTGGCAGGTTGGCGATTT
TTCACTCGCCGAGCTGAAGCGTCTTGATGCCGGCTCCTGGTTTGGTAAGCGCTTTGCCGGCGAACCGATCCCGACACTTG
AGGACATCATACACACGCTGAAATCAGAACGAATCGATGCCCCTTTGTACATTGAACTAAAGCAGCCCGGCATCGAAAAA
TCGGTCGTACAGCTATTGCAAAAACATTATTATTTACAGCGCGGACGCATCATATTTCAATCGTTTCACCCCGAGAGTTT
GCAGACGCTAAGGCCGCTCATCCCAAATAGCATTCCGCTCATTCAGCTCATTGGAGAACGCGAGACGGCTCGTATAAGCC
CGAACGAGCTGCTAGAGCAGGTCGCCGTCTATGCCGATGGCGTTGGCTTGCCGCTTTCACTCGCCAATCAAGAGTGGGTG
GATGCCGCTCATAGCCGCGGGCTCATCGTGCATGTCTACACGGTGAACAACCCACACGATTTGGCACGTCTATGCTCCAT
CGGCGTTGACGGCTTGTTCACCGACTACCCGGACCGCCCCGCCCGCATTGCTGCTTGCCACCAGCCGCCCCGTGGTTAA

Upstream 100 bases:

>100_bases
ATACGGATAAGCATTCACGTTCCGCACGTTTTACCATCTCTTCATCTTGTCTTCACAACCGTTTCATTCCAATAAGGTAT
GCTGGAAACAGAAAGGGGGG

Downstream 100 bases:

>100_bases
CAGATAGTTGGGCGGCTCCTCTTTTGTTAACATAATATAATTACGGTTTATTTGATTAAAAGCATTTCTCCTTTCATTTA
TCATCAAAAAAGCAGATCGA

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MTLHRIWLYVSFLVWLPLGLASSAAPQQPSVTREPIIIAHRGASGHAPEHTLASYRLAARMHADYIEVDVRMTKDGKLIA
MHDATLARTTNAETVYPRRSPWQVGDFSLAELKRLDAGSWFGKRFAGEPIPTLEDIIHTLKSERIDAPLYIELKQPGIEK
SVVQLLQKHYYLQRGRIIFQSFHPESLQTLRPLIPNSIPLIQLIGERETARISPNELLEQVAVYADGVGLPLSLANQEWV
DAAHSRGLIVHVYTVNNPHDLARLCSIGVDGLFTDYPDRPARIAACHQPPRG

Sequences:

>Translated_292_residues
MTLHRIWLYVSFLVWLPLGLASSAAPQQPSVTREPIIIAHRGASGHAPEHTLASYRLAARMHADYIEVDVRMTKDGKLIA
MHDATLARTTNAETVYPRRSPWQVGDFSLAELKRLDAGSWFGKRFAGEPIPTLEDIIHTLKSERIDAPLYIELKQPGIEK
SVVQLLQKHYYLQRGRIIFQSFHPESLQTLRPLIPNSIPLIQLIGERETARISPNELLEQVAVYADGVGLPLSLANQEWV
DAAHSRGLIVHVYTVNNPHDLARLCSIGVDGLFTDYPDRPARIAACHQPPRG
>Mature_291_residues
TLHRIWLYVSFLVWLPLGLASSAAPQQPSVTREPIIIAHRGASGHAPEHTLASYRLAARMHADYIEVDVRMTKDGKLIAM
HDATLARTTNAETVYPRRSPWQVGDFSLAELKRLDAGSWFGKRFAGEPIPTLEDIIHTLKSERIDAPLYIELKQPGIEKS
VVQLLQKHYYLQRGRIIFQSFHPESLQTLRPLIPNSIPLIQLIGERETARISPNELLEQVAVYADGVGLPLSLANQEWVD
AAHSRGLIVHVYTVNNPHDLARLCSIGVDGLFTDYPDRPARIAACHQPPRG

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI284055245, Length=108, Percent_Identity=43.5185185185185, Blast_Score=88, Evalue=8e-18,
Organism=Homo sapiens, GI284055240, Length=108, Percent_Identity=43.5185185185185, Blast_Score=88, Evalue=8e-18,
Organism=Homo sapiens, GI21361649, Length=108, Percent_Identity=43.5185185185185, Blast_Score=88, Evalue=8e-18,
Organism=Homo sapiens, GI284055242, Length=108, Percent_Identity=43.5185185185185, Blast_Score=88, Evalue=8e-18,
Organism=Homo sapiens, GI189571657, Length=279, Percent_Identity=27.9569892473118, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI33457301, Length=147, Percent_Identity=30.6122448979592, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1788572, Length=328, Percent_Identity=28.9634146341463, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1789858, Length=247, Percent_Identity=31.1740890688259, Blast_Score=103, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17542344, Length=287, Percent_Identity=25.7839721254355, Blast_Score=68, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 32716; Mature: 32585

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLHRIWLYVSFLVWLPLGLASSAAPQQPSVTREPIIIAHRGASGHAPEHTLASYRLAAR
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH
MHADYIEVDVRMTKDGKLIAMHDATLARTTNAETVYPRRSPWQVGDFSLAELKRLDAGSW
HCCCEEEEEEEECCCCCEEEEECCCCEECCCCCEECCCCCCCCCCCCCHHHHHHHCCCCH
FGKRFAGEPIPTLEDIIHTLKSERIDAPLYIELKQPGIEKSVVQLLQKHYYLQRGRIIFQ
HHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEE
SFHPESLQTLRPLIPNSIPLIQLIGERETARISPNELLEQVAVYADGVGLPLSLANQEWV
ECCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHH
DAAHSRGLIVHVYTVNNPHDLARLCSIGVDGLFTDYPDRPARIAACHQPPRG
HHHHCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure 
TLHRIWLYVSFLVWLPLGLASSAAPQQPSVTREPIIIAHRGASGHAPEHTLASYRLAAR
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH
MHADYIEVDVRMTKDGKLIAMHDATLARTTNAETVYPRRSPWQVGDFSLAELKRLDAGSW
HCCCEEEEEEEECCCCCEEEEECCCCEECCCCCEECCCCCCCCCCCCCHHHHHHHCCCCH
FGKRFAGEPIPTLEDIIHTLKSERIDAPLYIELKQPGIEKSVVQLLQKHYYLQRGRIIFQ
HHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEE
SFHPESLQTLRPLIPNSIPLIQLIGERETARISPNELLEQVAVYADGVGLPLSLANQEWV
ECCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHH
DAAHSRGLIVHVYTVNNPHDLARLCSIGVDGLFTDYPDRPARIAACHQPPRG
HHHHCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8012593; 9384377 [H]