| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is 138895278
Identifier: 138895278
GI number: 138895278
Start: 1708199
End: 1709701
Strand: Direct
Name: 138895278
Synonym: GTNG_1622
Alternate gene names: NA
Gene position: 1708199-1709701 (Clockwise)
Preceding gene: 138895277
Following gene: 138895279
Centisome position: 48.11
GC content: 34.33
Gene sequence:
>1503_bases ATGAGTCAAATTATTGATACTTTAGCTGAATTAGCTGCTAAGCAAAAATTGGTCCCATTTATGGGTGCTGGCTGTTCTGC TTCTATGCTACCAGATTGGGATTCTCTAGTCAGCGAGATGGCCGAACAGTTAGGACTAACGTCTATTACGAATCATTTGG AAATTGCTCAAAAATATGTGGATACGTTCGGAAGGGATAAATTTTGTGAGTTTTTGAAGAGTAAATTAGAAATTTCGGAA TTTGATGATGAAAAAGGGTATGTCCATTTAACAATAATGAATATGGGTGTTCCCGTTATTTACACTACAAACCAAGATAA TGTGATGGAAAAAGCGTTTGAGAAGTATGGGAGGAAATACAGGACTATCATTCATTTAAAGGATTTCTCTGAAGCGAAAT TGTCAGAACAGCTTTATATCAAGTTTCATGGGGATCTTAACTATCCTGAATCTATCGTATTTACACAAGAGGATTATCAA AAAAGAATGAGTGATCCGGAAAATGCATTTAACATCCGCTTACGAGCGGATCTATTAGCAAAAAATTTGTTATTTATAGG CTATAGTTTTCGTGATATCAATATTCAACAAATGTTTGCTGAACTACAGAAAGCATTTTATGGAGAATTACCCACATCCT ATATGATTGCATATAGATATAGTAATGAACTCCAATCACTGTGTAATCAATACGGAATTACATTGATAGATCCCATGAAG GAATGCCCTGAAGCTAAAAATCATATAGAAGCCTTCGAAACCTTTTTAAAATGTATGTTAGAAGAAGCAAGGAGCAAAAA ATTTGAAGATGGAATGGAAGAGTTTTTTACACCAATATCTTCAATACCTGTAAAAGTGGTAAGTAAGCAAGAAATAGATC TTTTAGAACAAACTATAAAAAAGAAACCTTTTTCTATAGGCATTGAATTGTTTCGGGAAATTTGCGATTTATCAGATATT CCTTTAGATTATGAAAAGCGAATTGTCAAAGCATTTATTGAATTAGCTAAGAAAGTGAAGACCGATGAAGATACCGATTC TTTGAATGCAGCAATCTTTAACTTAAGATTAAAGAATCCATTGAATAAACTTAAGATTTTGGCTGCACTTATGGCAACTG CTAATGTAAGAAGCCCAAAAAGTAAGTACGGTGGTGACCATTTCTTTGTTGGGATGCAAGGTGTTAGTAAAAGTACTTAC ATTGTTGTTGCAGCAAAAGCAATTGAATGCGTCTATAGTTGGGGATGGAAACCAACACCTCCTCTTTCTTGGAATGTTAA TCACTGGATTGAAAAAGGAGCAGATTTTAAGGCTTTACCAAAACAAATACACCAATACGTAATGTACTGGGTGGATAAAA TGAGAGGAGATTGCAAAACAGTCGCAGAACATCCGATTAAAAGGCAACAAAGACTTCGAGATTATCCTTCAATTGACCCC TCAGTTAATCTTACAGAAGATGAAACTAAATTACTGAGTGAGTTAATTAACCAAGAACTTTAA
Upstream 100 bases:
>100_bases TGAGTTTAATAAGCTTATAAATGACCTAGATAAATTAGAGAAGGCTTGAATTTGTTTTCAACAACTAGATTTTAGAGTTG TAGAAGAAGGGGGAAAGAAA
Downstream 100 bases:
>100_bases CGTTTGTCTTTATAGAAGAAGGGCCATCATTGCCACAGAAATAGTATTATATGATGAACAACATGGGATCCCTTGTATTT ACTATAGCTGTCATATTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MSQIIDTLAELAAKQKLVPFMGAGCSASMLPDWDSLVSEMAEQLGLTSITNHLEIAQKYVDTFGRDKFCEFLKSKLEISE FDDEKGYVHLTIMNMGVPVIYTTNQDNVMEKAFEKYGRKYRTIIHLKDFSEAKLSEQLYIKFHGDLNYPESIVFTQEDYQ KRMSDPENAFNIRLRADLLAKNLLFIGYSFRDINIQQMFAELQKAFYGELPTSYMIAYRYSNELQSLCNQYGITLIDPMK ECPEAKNHIEAFETFLKCMLEEARSKKFEDGMEEFFTPISSIPVKVVSKQEIDLLEQTIKKKPFSIGIELFREICDLSDI PLDYEKRIVKAFIELAKKVKTDEDTDSLNAAIFNLRLKNPLNKLKILAALMATANVRSPKSKYGGDHFFVGMQGVSKSTY IVVAAKAIECVYSWGWKPTPPLSWNVNHWIEKGADFKALPKQIHQYVMYWVDKMRGDCKTVAEHPIKRQQRLRDYPSIDP SVNLTEDETKLLSELINQEL
Sequences:
>Translated_500_residues MSQIIDTLAELAAKQKLVPFMGAGCSASMLPDWDSLVSEMAEQLGLTSITNHLEIAQKYVDTFGRDKFCEFLKSKLEISE FDDEKGYVHLTIMNMGVPVIYTTNQDNVMEKAFEKYGRKYRTIIHLKDFSEAKLSEQLYIKFHGDLNYPESIVFTQEDYQ KRMSDPENAFNIRLRADLLAKNLLFIGYSFRDINIQQMFAELQKAFYGELPTSYMIAYRYSNELQSLCNQYGITLIDPMK ECPEAKNHIEAFETFLKCMLEEARSKKFEDGMEEFFTPISSIPVKVVSKQEIDLLEQTIKKKPFSIGIELFREICDLSDI PLDYEKRIVKAFIELAKKVKTDEDTDSLNAAIFNLRLKNPLNKLKILAALMATANVRSPKSKYGGDHFFVGMQGVSKSTY IVVAAKAIECVYSWGWKPTPPLSWNVNHWIEKGADFKALPKQIHQYVMYWVDKMRGDCKTVAEHPIKRQQRLRDYPSIDP SVNLTEDETKLLSELINQEL >Mature_499_residues SQIIDTLAELAAKQKLVPFMGAGCSASMLPDWDSLVSEMAEQLGLTSITNHLEIAQKYVDTFGRDKFCEFLKSKLEISEF DDEKGYVHLTIMNMGVPVIYTTNQDNVMEKAFEKYGRKYRTIIHLKDFSEAKLSEQLYIKFHGDLNYPESIVFTQEDYQK RMSDPENAFNIRLRADLLAKNLLFIGYSFRDINIQQMFAELQKAFYGELPTSYMIAYRYSNELQSLCNQYGITLIDPMKE CPEAKNHIEAFETFLKCMLEEARSKKFEDGMEEFFTPISSIPVKVVSKQEIDLLEQTIKKKPFSIGIELFREICDLSDIP LDYEKRIVKAFIELAKKVKTDEDTDSLNAAIFNLRLKNPLNKLKILAALMATANVRSPKSKYGGDHFFVGMQGVSKSTYI VVAAKAIECVYSWGWKPTPPLSWNVNHWIEKGADFKALPKQIHQYVMYWVDKMRGDCKTVAEHPIKRQQRLRDYPSIDPS VNLTEDETKLLSELINQEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57640; Mature: 57509
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQIIDTLAELAAKQKLVPFMGAGCSASMLPDWDSLVSEMAEQLGLTSITNHLEIAQKYV CHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH DTFGRDKFCEFLKSKLEISEFDDEKGYVHLTIMNMGVPVIYTTNQDNVMEKAFEKYGRKY HHHCCHHHHHHHHHHCCHHHCCCCCCEEEEEEEECCCCEEEECCCHHHHHHHHHHHCCHH RTIIHLKDFSEAKLSEQLYIKFHGDLNYPESIVFTQEDYQKRMSDPENAFNIRLRADLLA EEEEEECCCCHHHCCCEEEEEEECCCCCCCCEEECHHHHHHHCCCCCCCEEEEEHHHHHH KNLLFIGYSFRDINIQQMFAELQKAFYGELPTSYMIAYRYSNELQSLCNQYGITLIDPMK HHHHHEEECCCCCCHHHHHHHHHHHHHCCCCHHHEEEHHHHHHHHHHHHHCCCEEECHHH ECPEAKNHIEAFETFLKCMLEEARSKKFEDGMEEFFTPISSIPVKVVSKQEIDLLEQTIK HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHCHHHHHHHHHHHH KKPFSIGIELFREICDLSDIPLDYEKRIVKAFIELAKKVKTDEDTDSLNAAIFNLRLKNP CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEHHCH LNKLKILAALMATANVRSPKSKYGGDHFFVGMQGVSKSTYIVVAAKAIECVYSWGWKPTP HHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCCCCEEEEEEHHHHHHHHHCCCCCCC PLSWNVNHWIEKGADFKALPKQIHQYVMYWVDKMRGDCKTVAEHPIKRQQRLRDYPSIDP CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHCCCCCCC SVNLTEDETKLLSELINQEL CCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SQIIDTLAELAAKQKLVPFMGAGCSASMLPDWDSLVSEMAEQLGLTSITNHLEIAQKYV HHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH DTFGRDKFCEFLKSKLEISEFDDEKGYVHLTIMNMGVPVIYTTNQDNVMEKAFEKYGRKY HHHCCHHHHHHHHHHCCHHHCCCCCCEEEEEEEECCCCEEEECCCHHHHHHHHHHHCCHH RTIIHLKDFSEAKLSEQLYIKFHGDLNYPESIVFTQEDYQKRMSDPENAFNIRLRADLLA EEEEEECCCCHHHCCCEEEEEEECCCCCCCCEEECHHHHHHHCCCCCCCEEEEEHHHHHH KNLLFIGYSFRDINIQQMFAELQKAFYGELPTSYMIAYRYSNELQSLCNQYGITLIDPMK HHHHHEEECCCCCCHHHHHHHHHHHHHCCCCHHHEEEHHHHHHHHHHHHHCCCEEECHHH ECPEAKNHIEAFETFLKCMLEEARSKKFEDGMEEFFTPISSIPVKVVSKQEIDLLEQTIK HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHCHHHHHHHHHHHH KKPFSIGIELFREICDLSDIPLDYEKRIVKAFIELAKKVKTDEDTDSLNAAIFNLRLKNP CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEHHCH LNKLKILAALMATANVRSPKSKYGGDHFFVGMQGVSKSTYIVVAAKAIECVYSWGWKPTP HHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCCCCEEEEEEHHHHHHHHHCCCCCCC PLSWNVNHWIEKGADFKALPKQIHQYVMYWVDKMRGDCKTVAEHPIKRQQRLRDYPSIDP CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHCCCCCCC SVNLTEDETKLLSELINQEL CCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA