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The map label for this gene is yodH [H]

Identifier: 138895091

GI number: 138895091

Start: 1516677

End: 1517375

Strand: Reverse

Name: yodH [H]

Synonym: GTNG_1429

Alternate gene names: 138895091

Gene position: 1517375-1516677 (Counterclockwise)

Preceding gene: 138895098

Following gene: 138895087

Centisome position: 42.74

GC content: 53.08

Gene sequence:

>699_bases
ATGACTTCGTATTTGGACTGGTTGGCCGAAATGGGGATCGATGGCGCCCACCCGGGAGGTTTTATGTTAACAAAAAATAT
ATTACGTAAACTCTATATTGATCATTCAACTTCGGTGCTTGACGTCGGCTGTGGAACGGGACAGACAGCGGCGTATATCG
CCGAACAGTACGGTGCCGATGTGACGGCGATCGATCTCCATCCAACAATGATCGCCAAAGCAAAACAGCGCTTTGCCGCT
ATGGCCGTCCCGGTTCGCCTGTACCGCGCTTCGGTCGAAGCGCTGCCGTTTCCTGCCGAAACATTCGATCTCGTGCTTTC
TGAGTCAGTGCTTGCCTTCGTTTCACTGCCAGAAGCGCTCGCTGAAATTCGCCGAGTGCTCAAAAAAGGTGGAACGTTCG
TCGGCATTGAAGCATGTCATGAGAAGTTAACCGCAACCGAGCAGCAGCAAATTGCCGCTTTTTATGGATTCCGGCGGCTG
ATGACGCCGGCTGGGTGGAAAGAGGCGCTTGAACAAAACGGATTCCGTTGCCGCCATTTTTCCTACACAGCCGCTACGGA
AGCGCCGAGCCAAGGAGCACCGTTTATTGTCGCCTTTCCATCGACGCCGGAAATGGCAAAGATGTGGCAGATGCATCAGC
AGCTGACTGCACAATTCAGCGACCGGCTCGGTTATTGCGTGTTTTGGTGCGAAACATAG

Upstream 100 bases:

>100_bases
CCCTTCATGAGTATAGAGACAAGCAAACTTTTTTGCCTAAAGACAAAACCGAGCTCTTTTGCGTATGATAAACCAATTCA
AGCAAAAAGGAGAGAAAAAC

Downstream 100 bases:

>100_bases
CTTACAAGACATTCATCACTGTTCTAAACAATGATGCCCCCTTTCCAGTCAATGAACAACGCCTCCTTTCATGTGTCATC
ACACGAAAGGAGGCGCCTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MTSYLDWLAEMGIDGAHPGGFMLTKNILRKLYIDHSTSVLDVGCGTGQTAAYIAEQYGADVTAIDLHPTMIAKAKQRFAA
MAVPVRLYRASVEALPFPAETFDLVLSESVLAFVSLPEALAEIRRVLKKGGTFVGIEACHEKLTATEQQQIAAFYGFRRL
MTPAGWKEALEQNGFRCRHFSYTAATEAPSQGAPFIVAFPSTPEMAKMWQMHQQLTAQFSDRLGYCVFWCET

Sequences:

>Translated_232_residues
MTSYLDWLAEMGIDGAHPGGFMLTKNILRKLYIDHSTSVLDVGCGTGQTAAYIAEQYGADVTAIDLHPTMIAKAKQRFAA
MAVPVRLYRASVEALPFPAETFDLVLSESVLAFVSLPEALAEIRRVLKKGGTFVGIEACHEKLTATEQQQIAAFYGFRRL
MTPAGWKEALEQNGFRCRHFSYTAATEAPSQGAPFIVAFPSTPEMAKMWQMHQQLTAQFSDRLGYCVFWCET
>Mature_231_residues
TSYLDWLAEMGIDGAHPGGFMLTKNILRKLYIDHSTSVLDVGCGTGQTAAYIAEQYGADVTAIDLHPTMIAKAKQRFAAM
AVPVRLYRASVEALPFPAETFDLVLSESVLAFVSLPEALAEIRRVLKKGGTFVGIEACHEKLTATEQQQIAAFYGFRRLM
TPAGWKEALEQNGFRCRHFSYTAATEAPSQGAPFIVAFPSTPEMAKMWQMHQQLTAQFSDRLGYCVFWCET

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 25688; Mature: 25557

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSYLDWLAEMGIDGAHPGGFMLTKNILRKLYIDHSTSVLDVGCGTGQTAAYIAEQYGAD
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCC
VTAIDLHPTMIAKAKQRFAAMAVPVRLYRASVEALPFPAETFDLVLSESVLAFVSLPEAL
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AEIRRVLKKGGTFVGIEACHEKLTATEQQQIAAFYGFRRLMTPAGWKEALEQNGFRCRHF
HHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEE
SYTAATEAPSQGAPFIVAFPSTPEMAKMWQMHQQLTAQFSDRLGYCVFWCET
EEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
>Mature Secondary Structure 
TSYLDWLAEMGIDGAHPGGFMLTKNILRKLYIDHSTSVLDVGCGTGQTAAYIAEQYGAD
CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCC
VTAIDLHPTMIAKAKQRFAAMAVPVRLYRASVEALPFPAETFDLVLSESVLAFVSLPEAL
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AEIRRVLKKGGTFVGIEACHEKLTATEQQQIAAFYGFRRLMTPAGWKEALEQNGFRCRHF
HHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEE
SYTAATEAPSQGAPFIVAFPSTPEMAKMWQMHQQLTAQFSDRLGYCVFWCET
EEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]