| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is ycbL [C]
Identifier: 138894916
GI number: 138894916
Start: 1326629
End: 1327468
Strand: Reverse
Name: ycbL [C]
Synonym: GTNG_1254
Alternate gene names: 138894916
Gene position: 1327468-1326629 (Counterclockwise)
Preceding gene: 138894918
Following gene: 138894915
Centisome position: 37.39
GC content: 51.07
Gene sequence:
>840_bases ATGTGGATCAATAAAGTGATCAAAAAACGGTTTGAAACGGACATAGTCCAACATGTGCATATCGCCAAAGGAACGGCCAT GTTTCAAGGCGTTCGGCTTGCCGTCCGTTGCTTCGTCGTTGACGGCGTCTTGATTGACACCGGCGCAAAATCGATGGAAA ACGAATTCACCTCGTTTTTCCAACAGCAAGACATCGACCAAGTCGTGATCACTCATTTTCACGAAGACCATACCGGTTGT GCGGCGTTTTTGCAGCGATCGATGGGATTGCCCATCTATATGAATGAGCCGATGATCGAGTATTGCCGGCAAAAGGCGGA CTATCCATTGTATCGGAAAATCTTTTGGGGAAAGCGTGACCCGTTTGCCGCCAAACCCATCGGCGCCACGTTTTCCTCCC GGAACGCAACGTGGGATGTGATCCCAACGCCCGGCCATGCGATCGATCATGTCGTCTTTTTGAACCGCGAAACGGGGCAG CTGTTTAGCGGCGACTTATACTGCCAAGAGAAAACGAAAGTCATCTTGCGTGAGGAGGACATTCCGACGATCATCGCCTC CTTGCAACACGTGTTGACGTACGATTTCGGTGACGTCTTTTGCGCCCATGCCGGCTATCTCCCGAACGGGCGTGAGGCGT TGCAGCGAAAGCTCGACTATTTGCTTGAACTCCAAGGCACGATCATCGACCTATACGAAAAAGGAACGCCGCCAAAACAA ATTCAGGCGCTCCTGTTTCCGAAAAAGTACCCGATCATCTTTTTTTCCGGCGGCGAGTGGGATTCGCTGCATATCGTCCG TTCGGTGATTCGGGACTATGAAGCAAAACAAGCAAGTTGA
Upstream 100 bases:
>100_bases ATGATTGATCGATCCATTTGACAACAAAAAAATGAATGAACATTCATTCTTTGTGGTATAATGGTGCCAGCATCTCCGCA TAAAAGGAGGGACGTTCACC
Downstream 100 bases:
>100_bases AGCGGGACGACCCCAAACGGCCATGAAACGGCCTAAGGGGTGTCCTTTTTTCTATATAATTGTGTTTGTCCACCGCTCTT GCCGACTTTGGCCTAGAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Metallo-Beta-Lactamase Family Protein; Beta-Lactamase Domain Protein; Zn-Dependent Hydrolase
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MWINKVIKKRFETDIVQHVHIAKGTAMFQGVRLAVRCFVVDGVLIDTGAKSMENEFTSFFQQQDIDQVVITHFHEDHTGC AAFLQRSMGLPIYMNEPMIEYCRQKADYPLYRKIFWGKRDPFAAKPIGATFSSRNATWDVIPTPGHAIDHVVFLNRETGQ LFSGDLYCQEKTKVILREEDIPTIIASLQHVLTYDFGDVFCAHAGYLPNGREALQRKLDYLLELQGTIIDLYEKGTPPKQ IQALLFPKKYPIIFFSGGEWDSLHIVRSVIRDYEAKQAS
Sequences:
>Translated_279_residues MWINKVIKKRFETDIVQHVHIAKGTAMFQGVRLAVRCFVVDGVLIDTGAKSMENEFTSFFQQQDIDQVVITHFHEDHTGC AAFLQRSMGLPIYMNEPMIEYCRQKADYPLYRKIFWGKRDPFAAKPIGATFSSRNATWDVIPTPGHAIDHVVFLNRETGQ LFSGDLYCQEKTKVILREEDIPTIIASLQHVLTYDFGDVFCAHAGYLPNGREALQRKLDYLLELQGTIIDLYEKGTPPKQ IQALLFPKKYPIIFFSGGEWDSLHIVRSVIRDYEAKQAS >Mature_279_residues MWINKVIKKRFETDIVQHVHIAKGTAMFQGVRLAVRCFVVDGVLIDTGAKSMENEFTSFFQQQDIDQVVITHFHEDHTGC AAFLQRSMGLPIYMNEPMIEYCRQKADYPLYRKIFWGKRDPFAAKPIGATFSSRNATWDVIPTPGHAIDHVVFLNRETGQ LFSGDLYCQEKTKVILREEDIPTIIASLQHVLTYDFGDVFCAHAGYLPNGREALQRKLDYLLELQGTIIDLYEKGTPPKQ IQALLFPKKYPIIFFSGGEWDSLHIVRSVIRDYEAKQAS
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31981; Mature: 31981
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWINKVIKKRFETDIVQHVHIAKGTAMFQGVRLAVRCFVVDGVLIDTGAKSMENEFTSFF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHH QQQDIDQVVITHFHEDHTGCAAFLQRSMGLPIYMNEPMIEYCRQKADYPLYRKIFWGKRD HHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCHHHHHHCCCCC PFAAKPIGATFSSRNATWDVIPTPGHAIDHVVFLNRETGQLFSGDLYCQEKTKVILREED CCCCCCCCCCCCCCCCEEEEECCCCCHHCEEEEEECCCCCEECCCEEECCCCEEEEECCC IPTIIASLQHVLTYDFGDVFCAHAGYLPNGREALQRKLDYLLELQGTIIDLYEKGTPPKQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEHHCCCCHHH IQALLFPKKYPIIFFSGGEWDSLHIVRSVIRDYEAKQAS HHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MWINKVIKKRFETDIVQHVHIAKGTAMFQGVRLAVRCFVVDGVLIDTGAKSMENEFTSFF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHH QQQDIDQVVITHFHEDHTGCAAFLQRSMGLPIYMNEPMIEYCRQKADYPLYRKIFWGKRD HHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCHHHHHHCCCCC PFAAKPIGATFSSRNATWDVIPTPGHAIDHVVFLNRETGQLFSGDLYCQEKTKVILREED CCCCCCCCCCCCCCCCEEEEECCCCCHHCEEEEEECCCCCEECCCEEECCCCEEEEECCC IPTIIASLQHVLTYDFGDVFCAHAGYLPNGREALQRKLDYLLELQGTIIDLYEKGTPPKQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEHHCCCCHHH IQALLFPKKYPIIFFSGGEWDSLHIVRSVIRDYEAKQAS HHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA