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The map label for this gene is yurR [H]

Identifier: 138894914

GI number: 138894914

Start: 1324363

End: 1325487

Strand: Reverse

Name: yurR [H]

Synonym: GTNG_1252

Alternate gene names: 138894914

Gene position: 1325487-1324363 (Counterclockwise)

Preceding gene: 138894915

Following gene: 138894906

Centisome position: 37.33

GC content: 57.33

Gene sequence:

>1125_bases
ATGGGATCGTACATCGTTGTCGGAGCTGGCATTTTAGGAGCGGCGGTGGCCTACCACTTAGCGAAAGAAGGGGCTGCCGT
GACGATCATCGACCGCGGTGACAAAGGACAGGCGACCGATGCGGCGGCGGGGATCGTTTGCCCTTGGTTGTCGCAGCGCC
GCAACCAAAAATGGTACCGATTGGCGAAAGGCGGGGCGAAGTTTTATCCTTCCCTCATTGAAGAGCTGCAATCATATGGA
GAAACGGAAACCGGCTATGCGCGCGTCGGGACGCTCTGCTTGCATACGGATGAACAAAAGCTTGAGCAGATGAAAGCGCG
CGCCCTCAAACGGCACGAAGATACACCGGAAATCGGGGACATCGTGCAACTTGATCCGAAGGAAGCAAAAGAGTTGTTTC
CGCTACTAGCTGATGGGTATCAGGCCATTTATGTAAGCGGGGGAGCTCGCGTCAACGGCCGAGCGCTGCGCACTGCGCTT
CTCAATGCAGCCCAAAAGCTCGGGGCCATTCATGTTCGTGGAAATGCTCGCCTTCTCCATCAGGGAACGCGCATCATCGG
CGTGGAAGCGGATGGAACGACCTATGCCGCTGAAGCTGTCATCATCACGGCGGGCGCTTGGGCCGGCGAGTTGCTTCGCC
CTCTAGGCATCGAGCTGCTCGTCACACCGCAAAAAGGACAACTCATTCACTTAGAACATCCGAACCACGACACGTCCCAT
TGGCCTGTTGTCATGCCACCGAGCAATCAGTATATGCTCGCCTTTCCAAGAGGTAGAATGGTGATCGGAACAACACACGA
AGATGAAGCAGGCTTGGACGTCCGCCCTACCGCCGGAGGAATGCACGAATTATTGGACAAAGCGCTCACCGTTGCGCCAG
GGCTCTCCGTTTGCACATACATCGAAACGCGGGTTGGATTCCGTCCGCGCACACCTGGGTTTCTCCCGATCTTTGGGGTA
CTTCCCGGCTTTACCGGCCTTTACATCGCCAACGGCCTCGGCTCCTCAGGGCTCACTGTCGGCCCTTATTTAGGGGCGGA
ACTAGCCAAGCTCGTGCTCGGCATCCCGACCGAACTCGACCCTCATGACTATGACGTCACGAGCGCCATCGCCCCGCTTG
CCTAA

Upstream 100 bases:

>100_bases
TCGGCACTGTGCTCACCGATCAGCCATTCAAGCTTCCCCTGCAGCTTCTCCGTTTGCACTATGTATGGTATGCTAGTAGA
AAAAAGGAAAAGGTGTTAGT

Downstream 100 bases:

>100_bases
CGCCGCGCCGTGTTCGAAATAAACGGCCGCCGACCGAGCCGATTGCCATCACACTCGTCAAACAAAGGTCTTATCGACTG
CGAATTCGATAGAGCGTTGC

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MGSYIVVGAGILGAAVAYHLAKEGAAVTIIDRGDKGQATDAAAGIVCPWLSQRRNQKWYRLAKGGAKFYPSLIEELQSYG
ETETGYARVGTLCLHTDEQKLEQMKARALKRHEDTPEIGDIVQLDPKEAKELFPLLADGYQAIYVSGGARVNGRALRTAL
LNAAQKLGAIHVRGNARLLHQGTRIIGVEADGTTYAAEAVIITAGAWAGELLRPLGIELLVTPQKGQLIHLEHPNHDTSH
WPVVMPPSNQYMLAFPRGRMVIGTTHEDEAGLDVRPTAGGMHELLDKALTVAPGLSVCTYIETRVGFRPRTPGFLPIFGV
LPGFTGLYIANGLGSSGLTVGPYLGAELAKLVLGIPTELDPHDYDVTSAIAPLA

Sequences:

>Translated_374_residues
MGSYIVVGAGILGAAVAYHLAKEGAAVTIIDRGDKGQATDAAAGIVCPWLSQRRNQKWYRLAKGGAKFYPSLIEELQSYG
ETETGYARVGTLCLHTDEQKLEQMKARALKRHEDTPEIGDIVQLDPKEAKELFPLLADGYQAIYVSGGARVNGRALRTAL
LNAAQKLGAIHVRGNARLLHQGTRIIGVEADGTTYAAEAVIITAGAWAGELLRPLGIELLVTPQKGQLIHLEHPNHDTSH
WPVVMPPSNQYMLAFPRGRMVIGTTHEDEAGLDVRPTAGGMHELLDKALTVAPGLSVCTYIETRVGFRPRTPGFLPIFGV
LPGFTGLYIANGLGSSGLTVGPYLGAELAKLVLGIPTELDPHDYDVTSAIAPLA
>Mature_373_residues
GSYIVVGAGILGAAVAYHLAKEGAAVTIIDRGDKGQATDAAAGIVCPWLSQRRNQKWYRLAKGGAKFYPSLIEELQSYGE
TETGYARVGTLCLHTDEQKLEQMKARALKRHEDTPEIGDIVQLDPKEAKELFPLLADGYQAIYVSGGARVNGRALRTALL
NAAQKLGAIHVRGNARLLHQGTRIIGVEADGTTYAAEAVIITAGAWAGELLRPLGIELLVTPQKGQLIHLEHPNHDTSHW
PVVMPPSNQYMLAFPRGRMVIGTTHEDEAGLDVRPTAGGMHELLDKALTVAPGLSVCTYIETRVGFRPRTPGFLPIFGVL
PGFTGLYIANGLGSSGLTVGPYLGAELAKLVLGIPTELDPHDYDVTSAIAPLA

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: NA

Molecular weight: Translated: 39992; Mature: 39861

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSYIVVGAGILGAAVAYHLAKEGAAVTIIDRGDKGQATDAAAGIVCPWLSQRRNQKWYR
CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEECCHHHHHCCCHHHH
LAKGGAKFYPSLIEELQSYGETETGYARVGTLCLHTDEQKLEQMKARALKRHEDTPEIGD
HHCCCHHHHHHHHHHHHHCCCCCCCHHEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCC
IVQLDPKEAKELFPLLADGYQAIYVSGGARVNGRALRTALLNAAQKLGAIHVRGNARLLH
EEEECHHHHHHHHHHHHCCCEEEEEECCCEECHHHHHHHHHHHHHHHCEEEEECCCEEEE
QGTRIIGVEADGTTYAAEAVIITAGAWAGELLRPLGIELLVTPQKGQLIHLEHPNHDTSH
CCCEEEEEECCCCEEEEEEEEEEECCCHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCC
WPVVMPPSNQYMLAFPRGRMVIGTTHEDEAGLDVRPTAGGMHELLDKALTVAPGLSVCTY
CCEEECCCCCEEEEECCCCEEEEECCCCCCCCEECCCCCCHHHHHHHHHHHCCCCHHHHH
IETRVGFRPRTPGFLPIFGVLPGFTGLYIANGLGSSGLTVGPYLGAELAKLVLGIPTELD
HHHHCCCCCCCCCCEEHHHHHCCCCHHHEECCCCCCCCEECCHHHHHHHHHHHCCCCCCC
PHDYDVTSAIAPLA
CCCCCHHHHHCCCC
>Mature Secondary Structure 
GSYIVVGAGILGAAVAYHLAKEGAAVTIIDRGDKGQATDAAAGIVCPWLSQRRNQKWYR
CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEECCHHHHHCCCHHHH
LAKGGAKFYPSLIEELQSYGETETGYARVGTLCLHTDEQKLEQMKARALKRHEDTPEIGD
HHCCCHHHHHHHHHHHHHCCCCCCCHHEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCC
IVQLDPKEAKELFPLLADGYQAIYVSGGARVNGRALRTALLNAAQKLGAIHVRGNARLLH
EEEECHHHHHHHHHHHHCCCEEEEEECCCEECHHHHHHHHHHHHHHHCEEEEECCCEEEE
QGTRIIGVEADGTTYAAEAVIITAGAWAGELLRPLGIELLVTPQKGQLIHLEHPNHDTSH
CCCEEEEEECCCCEEEEEEEEEEECCCHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCC
WPVVMPPSNQYMLAFPRGRMVIGTTHEDEAGLDVRPTAGGMHELLDKALTVAPGLSVCTY
CCEEECCCCCEEEEECCCCEEEEECCCCCCCCEECCCCCCHHHHHHHHHHHCCCCHHHHH
IETRVGFRPRTPGFLPIFGVLPGFTGLYIANGLGSSGLTVGPYLGAELAKLVLGIPTELD
HHHHCCCCCCCCCCEEHHHHHCCCCHHHEECCCCCCCCEECCHHHHHHHHHHHCCCCCCC
PHDYDVTSAIAPLA
CCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]