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The map label for this gene is yjcL [H]

Identifier: 138894904

GI number: 138894904

Start: 1306287

End: 1307519

Strand: Direct

Name: yjcL [H]

Synonym: GTNG_1242

Alternate gene names: 138894904

Gene position: 1306287-1307519 (Clockwise)

Preceding gene: 138894903

Following gene: 138894905

Centisome position: 36.79

GC content: 40.96

Gene sequence:

>1233_bases
ATGGAGGGTTGGGAAATGACGAATACATTGATTCAATCGGATGATACATGGATTCTTTGGGCGATTCTAGTGGGCTGGGC
AGCGATCAGTATTTATTTAGAGCAAAAATATCAATGGGCTGCCAAAATATCCGGAGCGATCATTGCGCTTGTTGGTGCGA
TGATTTTGGCCAACTTGAATATCATTCCTACTGAATCACCGGTGTATGATACGGTCTGGTCGTATGTCATCCCGCTAGCA
ATCCCGTTACTCCTTTTTCAAACGAATATAATGAAAATCTGGCGTGAAAGTGGTAGATTAGTGGTAATTTTCTTGATTAG
TTCAGTCGGAACTGTGGCAGGCGCTATTATCTCCTTCTTTTTACTCAAAGACCATATTCCTTTACTATATAAGATTTCTG
CGATGATGACAGGTTCTTATATTGGTGGTGGCGTAAACTTTGTTGCGATGGCCGCAAAATTCGAAACACCAAGTGAGCTC
GTATCCGCGACGGTCGTTGCCGATAATATGGTGATGGCACTTTATTTCTTGGGGTTGATCTTGATTCCAGCATTAACGTT
TTTCCGGAAATATTTTAAGACCCCGTACATCGATGAGTTGGAAAGCAATGTGAAAGGAGATGAAAACCACGCGGCATCCT
ACTGGAAGAGAAAAGATATCTCCTTGCTCGATATCGCAAAAGCCGTCGGGACGACATTTGTCATTGTCGCCATCTCATTT
ACAATTGCCGGTTTTTTGGATGAATTGATTCCATCTGGTGAGGATGCGAACGTATTTTTAAATATTTTAAATGGAATATT
AGGTGATAACTACTTAATGTTAACGACGATTACACTGCTTGCGGTCACTCTGTTCCCGCGTTACTTTGAAAATATCCATG
GAACTCAGGAAATCGGTACATTTTTAATTTATATTTTCTTCGTCGTGATCGGTGTACCGGCTTCCATTCAAGTCATCTTA
CAAAATGCACCGCTCATCTTCGTATTATGTGCTTTGATGGTGATTATCAACATGATCATTTCCTTTGGTATTGGGAAAAT
CTGTAAATTTTCACTGGAAGAAATTATTCTGGCGAGCAATGCAAATATCGGTGGACCAACAACGGCCGCAGCTATGGCGA
TTTCAAAAGGCTGGATCAAATTAGTCGGACCGATTATGCTTGTGGGTACTTTAGGTTATATTATCGGAAACTATATAGGA
TCGGCAGTTGGGGCTTGGTTAAGTACTTTATAA

Upstream 100 bases:

>100_bases
TCAGTTACAGGTGAGGAGCAGCCAGTCAATCGAGGAAGACCGCGGCAAATTTATTCACTTCTTTTGGATCAATGGTCAAT
GCACTGAGGTTTGATAAAAA

Downstream 100 bases:

>100_bases
ATGAACAACGGGTAATACGTAGAGGGAATTCTACGCGATTACCCGTATTTTTGTTATAACCACATGTTTGAACTTATATT
TTGCAGCATCAGCTTCTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MEGWEMTNTLIQSDDTWILWAILVGWAAISIYLEQKYQWAAKISGAIIALVGAMILANLNIIPTESPVYDTVWSYVIPLA
IPLLLFQTNIMKIWRESGRLVVIFLISSVGTVAGAIISFFLLKDHIPLLYKISAMMTGSYIGGGVNFVAMAAKFETPSEL
VSATVVADNMVMALYFLGLILIPALTFFRKYFKTPYIDELESNVKGDENHAASYWKRKDISLLDIAKAVGTTFVIVAISF
TIAGFLDELIPSGEDANVFLNILNGILGDNYLMLTTITLLAVTLFPRYFENIHGTQEIGTFLIYIFFVVIGVPASIQVIL
QNAPLIFVLCALMVIINMIISFGIGKICKFSLEEIILASNANIGGPTTAAAMAISKGWIKLVGPIMLVGTLGYIIGNYIG
SAVGAWLSTL

Sequences:

>Translated_410_residues
MEGWEMTNTLIQSDDTWILWAILVGWAAISIYLEQKYQWAAKISGAIIALVGAMILANLNIIPTESPVYDTVWSYVIPLA
IPLLLFQTNIMKIWRESGRLVVIFLISSVGTVAGAIISFFLLKDHIPLLYKISAMMTGSYIGGGVNFVAMAAKFETPSEL
VSATVVADNMVMALYFLGLILIPALTFFRKYFKTPYIDELESNVKGDENHAASYWKRKDISLLDIAKAVGTTFVIVAISF
TIAGFLDELIPSGEDANVFLNILNGILGDNYLMLTTITLLAVTLFPRYFENIHGTQEIGTFLIYIFFVVIGVPASIQVIL
QNAPLIFVLCALMVIINMIISFGIGKICKFSLEEIILASNANIGGPTTAAAMAISKGWIKLVGPIMLVGTLGYIIGNYIG
SAVGAWLSTL
>Mature_410_residues
MEGWEMTNTLIQSDDTWILWAILVGWAAISIYLEQKYQWAAKISGAIIALVGAMILANLNIIPTESPVYDTVWSYVIPLA
IPLLLFQTNIMKIWRESGRLVVIFLISSVGTVAGAIISFFLLKDHIPLLYKISAMMTGSYIGGGVNFVAMAAKFETPSEL
VSATVVADNMVMALYFLGLILIPALTFFRKYFKTPYIDELESNVKGDENHAASYWKRKDISLLDIAKAVGTTFVIVAISF
TIAGFLDELIPSGEDANVFLNILNGILGDNYLMLTTITLLAVTLFPRYFENIHGTQEIGTFLIYIFFVVIGVPASIQVIL
QNAPLIFVLCALMVIINMIISFGIGKICKFSLEEIILASNANIGGPTTAAAMAISKGWIKLVGPIMLVGTLGYIIGNYIG
SAVGAWLSTL

Specific function: Unknown

COG id: COG5505

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008537 [H]

Pfam domain/function: PF05684 DUF819 [H]

EC number: NA

Molecular weight: Translated: 44768; Mature: 44768

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGWEMTNTLIQSDDTWILWAILVGWAAISIYLEQKYQWAAKISGAIIALVGAMILANLN
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IIPTESPVYDTVWSYVIPLAIPLLLFQTNIMKIWRESGRLVVIFLISSVGTVAGAIISFF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHH
LLKDHIPLLYKISAMMTGSYIGGGVNFVAMAAKFETPSELVSATVVADNMVMALYFLGLI
HHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LIPALTFFRKYFKTPYIDELESNVKGDENHAASYWKRKDISLLDIAKAVGTTFVIVAISF
HHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
TIAGFLDELIPSGEDANVFLNILNGILGDNYLMLTTITLLAVTLFPRYFENIHGTQEIGT
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FLIYIFFVVIGVPASIQVILQNAPLIFVLCALMVIINMIISFGIGKICKFSLEEIILASN
HHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
ANIGGPTTAAAMAISKGWIKLVGPIMLVGTLGYIIGNYIGSAVGAWLSTL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEGWEMTNTLIQSDDTWILWAILVGWAAISIYLEQKYQWAAKISGAIIALVGAMILANLN
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IIPTESPVYDTVWSYVIPLAIPLLLFQTNIMKIWRESGRLVVIFLISSVGTVAGAIISFF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHH
LLKDHIPLLYKISAMMTGSYIGGGVNFVAMAAKFETPSELVSATVVADNMVMALYFLGLI
HHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LIPALTFFRKYFKTPYIDELESNVKGDENHAASYWKRKDISLLDIAKAVGTTFVIVAISF
HHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
TIAGFLDELIPSGEDANVFLNILNGILGDNYLMLTTITLLAVTLFPRYFENIHGTQEIGT
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FLIYIFFVVIGVPASIQVILQNAPLIFVLCALMVIINMIISFGIGKICKFSLEEIILASN
HHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
ANIGGPTTAAAMAISKGWIKLVGPIMLVGTLGYIIGNYIGSAVGAWLSTL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]