| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is celCD [H]
Identifier: 138894866
GI number: 138894866
Start: 1272842
End: 1273903
Strand: Direct
Name: celCD [H]
Synonym: GTNG_1202
Alternate gene names: 138894866
Gene position: 1272842-1273903 (Clockwise)
Preceding gene: 138894865
Following gene: 138894868
Centisome position: 35.85
GC content: 56.69
Gene sequence:
>1062_bases ATGCCGCGCTATTGCATTGTCAATGCCGATGACTTTGGCTACTCGAAAGGGGTCAACTACGGGATTTTGGAAGCGTTTCA ACACGGTGTCGTTACATCGGCGACTTTGATGACTAACATGCCAGCGGCAGAGCACGCCGCCCGACTGGCGAAAGATCATC CGGAGCTTGGCGTCGGTATTCATTTCGTGCTGACGTGCGGCCGTCCGTTGACTGATGTTCCAACCCTTGTGAACGAACAC GGGGAGTTTCCACGGCGTGGGGAGGCGCTTGACAGTGCCGAACGCAGCGACATCGAGCGGGAGCTTCGCGCCCAATTGGA GCGGTTTTTCTCGTTTGGGCTTACCCCGACGCATATGGACAGCCACCATCACGTCCATGAGCATCCAAACGTGTTTCCGG TGATCGAGCAGCTGGCTGAATGCTATCGGTTGCCGATCCGCCCGGTACGAACCGCGCGGCCGCACCGGCTGGCCACCGTC GATGTCTTTTTTCCGGATTTCTACGGCGATGGGTTGACGAAAGACCGCTTTTTAGCCCTGATCGACCGGATTGACGATGG CCAGACGGCGGAAGTGATGTGCCACCCAGCGTACATCGATGTTCCGCTTGCGCAAGGAAGTTCCTATTGCCAGCAACGGG TTGAAGAGTTGGCTGTGCTGACCGACCCGGCGCTCGTTGAGGAGCTCGCAGAGCGTGGCGTTCAGCTGATTACGTACCGT GAATTTTACAAATTATTAGGAGAGGGGCTTATGCAGACACAAGAACAGACGATCTTTCAACTCATTCTTCACGGCGGCAA TGGCCGCAGCTATGCCATGGAGGCGATCGCCGCCGCGAAACAAGGGGAATTTGCCGAGGCGCACCGGCTGCTTGAGCGGG CTGGGGCGGAGCTGCAAGCCGCCCATGAGCTGCAAACCGCGCTGTTGCAGCAAGAGGCTGGGGGGCAATCGACTGTTGTG ACGCTGCTTATGGTGCATGCCCAAGACCATTTGATGACAGCGATGACAGTGAAAGAGCTAGCATCTGAATTCATCGAACT GTATGAACGAATCACTCCGTAA
Upstream 100 bases:
>100_bases GATGATCTGGGATAAACAAAAAGCGGCTGAAGAGCAAGCCGATGCGACGATATCCGGCGGAGCTGGAACGACGCATTCGA TGTAAAGGAGATGGAGCGAG
Downstream 100 bases:
>100_bases AGACAACCTTCACCGGAGGACGAGTAAGAGGGGAGGTAATGAGTAAACCATAAAATAATTATGTAAATTTATCAGTTCAA ATCGAGAAACCCAGCTTTCA
Product: putative phospho-beta-glucosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MPRYCIVNADDFGYSKGVNYGILEAFQHGVVTSATLMTNMPAAEHAARLAKDHPELGVGIHFVLTCGRPLTDVPTLVNEH GEFPRRGEALDSAERSDIERELRAQLERFFSFGLTPTHMDSHHHVHEHPNVFPVIEQLAECYRLPIRPVRTARPHRLATV DVFFPDFYGDGLTKDRFLALIDRIDDGQTAEVMCHPAYIDVPLAQGSSYCQQRVEELAVLTDPALVEELAERGVQLITYR EFYKLLGEGLMQTQEQTIFQLILHGGNGRSYAMEAIAAAKQGEFAEAHRLLERAGAELQAAHELQTALLQQEAGGQSTVV TLLMVHAQDHLMTAMTVKELASEFIELYERITP
Sequences:
>Translated_353_residues MPRYCIVNADDFGYSKGVNYGILEAFQHGVVTSATLMTNMPAAEHAARLAKDHPELGVGIHFVLTCGRPLTDVPTLVNEH GEFPRRGEALDSAERSDIERELRAQLERFFSFGLTPTHMDSHHHVHEHPNVFPVIEQLAECYRLPIRPVRTARPHRLATV DVFFPDFYGDGLTKDRFLALIDRIDDGQTAEVMCHPAYIDVPLAQGSSYCQQRVEELAVLTDPALVEELAERGVQLITYR EFYKLLGEGLMQTQEQTIFQLILHGGNGRSYAMEAIAAAKQGEFAEAHRLLERAGAELQAAHELQTALLQQEAGGQSTVV TLLMVHAQDHLMTAMTVKELASEFIELYERITP >Mature_352_residues PRYCIVNADDFGYSKGVNYGILEAFQHGVVTSATLMTNMPAAEHAARLAKDHPELGVGIHFVLTCGRPLTDVPTLVNEHG EFPRRGEALDSAERSDIERELRAQLERFFSFGLTPTHMDSHHHVHEHPNVFPVIEQLAECYRLPIRPVRTARPHRLATVD VFFPDFYGDGLTKDRFLALIDRIDDGQTAEVMCHPAYIDVPLAQGSSYCQQRVEELAVLTDPALVEELAERGVQLITYRE FYKLLGEGLMQTQEQTIFQLILHGGNGRSYAMEAIAAAKQGEFAEAHRLLERAGAELQAAHELQTALLQQEAGGQSTVVT LLMVHAQDHLMTAMTVKELASEFIELYERITP
Specific function: Unknown
COG id: COG3394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0249 family [H]
Homologues:
Organism=Homo sapiens, GI63054868, Length=287, Percent_Identity=32.7526132404181, Blast_Score=102, Evalue=7e-22, Organism=Escherichia coli, GI1788028, Length=251, Percent_Identity=43.0278884462151, Blast_Score=191, Evalue=9e-50, Organism=Escherichia coli, GI1788031, Length=97, Percent_Identity=43.298969072165, Blast_Score=85, Evalue=8e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002509 - InterPro: IPR006879 - InterPro: IPR022948 [H]
Pfam domain/function: PF04794 YdjC [H]
EC number: NA
Molecular weight: Translated: 39484; Mature: 39353
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS51095 PTS_EIIA_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRYCIVNADDFGYSKGVNYGILEAFQHGVVTSATLMTNMPAAEHAARLAKDHPELGVGI CCCEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCE HFVLTCGRPLTDVPTLVNEHGEFPRRGEALDSAERSDIERELRAQLERFFSFGLTPTHMD EEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SHHHVHEHPNVFPVIEQLAECYRLPIRPVRTARPHRLATVDVFFPDFYGDGLTKDRFLAL CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCHHCCCCCCHHHHHHH IDRIDDGQTAEVMCHPAYIDVPLAQGSSYCQQRVEELAVLTDPALVEELAERGVQLITYR HHHCCCCCCEEEEEECCEEEEEHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHH EFYKLLGEGLMQTQEQTIFQLILHGGNGRSYAMEAIAAAKQGEFAEAHRLLERAGAELQA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHH AHELQTALLQQEAGGQSTVVTLLMVHAQDHLMTAMTVKELASEFIELYERITP HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PRYCIVNADDFGYSKGVNYGILEAFQHGVVTSATLMTNMPAAEHAARLAKDHPELGVGI CCEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCE HFVLTCGRPLTDVPTLVNEHGEFPRRGEALDSAERSDIERELRAQLERFFSFGLTPTHMD EEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SHHHVHEHPNVFPVIEQLAECYRLPIRPVRTARPHRLATVDVFFPDFYGDGLTKDRFLAL CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCHHCCCCCCHHHHHHH IDRIDDGQTAEVMCHPAYIDVPLAQGSSYCQQRVEELAVLTDPALVEELAERGVQLITYR HHHCCCCCCEEEEEECCEEEEEHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHH EFYKLLGEGLMQTQEQTIFQLILHGGNGRSYAMEAIAAAKQGEFAEAHRLLERAGAELQA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHH AHELQTALLQQEAGGQSTVVTLLMVHAQDHLMTAMTVKELASEFIELYERITP HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407820 [H]