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The map label for this gene is yneB [H]

Identifier: 138894849

GI number: 138894849

Start: 1255226

End: 1255885

Strand: Direct

Name: yneB [H]

Synonym: GTNG_1185

Alternate gene names: 138894849

Gene position: 1255226-1255885 (Clockwise)

Preceding gene: 138894848

Following gene: 138894850

Centisome position: 35.36

GC content: 56.82

Gene sequence:

>660_bases
ATGGTCATGAAGGCGGTCATTTACTGCCGTGTCAGCACGGATAAAACGGAGCAGGAAACATCGCTTGCACGGCAGCGCAC
CGAACTGGAGAAGCTGGCGAAAGAGTGCGGCTTTGACGTCATCAAAGTGATCGCCGAGCAGGCGAGCGGCTACGAAGCCG
ACCGTGACGGAGTACTCGAGCTGCTTGCGCTTTGTGAAGAAGAGGAGGTTGACGCCTTACTCATTCAAGATGAAACACGA
CTCGGGCGTGGCCATGCGCGCATGGCAGTGTTGCACTGCTTGAAAAAAAGAGGGGTGAAAATATACAGCGCCAGCCACCA
TGGAGAGATGCCGCTGTCAGAGGCTGATGAGATGGTGCTGTCGATTATTGCCATTGTCGAGGAGTATCAACGGAAAATAC
ATAATGCGAAGATTAAGCGCGGGATGCAGCGGGCCATCGCCCGCGGTTACCGGCCGGAGCGGAACTTAACGCGCCGTGGG
GAAAACGCTGGGCGCGATCGGATTGAGCTGCCAGTCGAAGAGATCGTTCGCCTGCGCGAGCGCGGCTTGACGTTTGCGGA
CATCGCTGCGACGCTCCGGAGCTTTGGTTACGAGGCGTCCAAAGCGACCGTCCATCGCCGCTATCAAGAGTATATGGATG
AACAGCAAGGGCGGCATTGA

Upstream 100 bases:

>100_bases
GCCGAGCTCGCGCCTCACCGCCGGTGAACAAATCGTCATCCCTGTGTTAAAATCAAAGCAGGACGGCTCATTGGCCGTCA
AGCGGTGATAGAAAGAAGGG

Downstream 100 bases:

>100_bases
CTGCGTGTTGTCCTTGGCTCTGAAGGTGCGGATCGGCAAAGAAAGAAGGTCAAGATGTCATCGTTGCCATCTCCCCGTGT
CATCGGATAAGATAAAACAG

Product: resolvase family site-specific recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MVMKAVIYCRVSTDKTEQETSLARQRTELEKLAKECGFDVIKVIAEQASGYEADRDGVLELLALCEEEEVDALLIQDETR
LGRGHARMAVLHCLKKRGVKIYSASHHGEMPLSEADEMVLSIIAIVEEYQRKIHNAKIKRGMQRAIARGYRPERNLTRRG
ENAGRDRIELPVEEIVRLRERGLTFADIAATLRSFGYEASKATVHRRYQEYMDEQQGRH

Sequences:

>Translated_219_residues
MVMKAVIYCRVSTDKTEQETSLARQRTELEKLAKECGFDVIKVIAEQASGYEADRDGVLELLALCEEEEVDALLIQDETR
LGRGHARMAVLHCLKKRGVKIYSASHHGEMPLSEADEMVLSIIAIVEEYQRKIHNAKIKRGMQRAIARGYRPERNLTRRG
ENAGRDRIELPVEEIVRLRERGLTFADIAATLRSFGYEASKATVHRRYQEYMDEQQGRH
>Mature_219_residues
MVMKAVIYCRVSTDKTEQETSLARQRTELEKLAKECGFDVIKVIAEQASGYEADRDGVLELLALCEEEEVDALLIQDETR
LGRGHARMAVLHCLKKRGVKIYSASHHGEMPLSEADEMVLSIIAIVEEYQRKIHNAKIKRGMQRAIARGYRPERNLTRRG
ENAGRDRIELPVEEIVRLRERGLTFADIAATLRSFGYEASKATVHRRYQEYMDEQQGRH

Specific function: This Protein Catalyzes The Site-Specific Recombination Of The Transposon And Also Regulates Its Frequency Of Transposition. [C]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 recombinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006119 [H]

Pfam domain/function: PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 25101; Mature: 25101

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMKAVIYCRVSTDKTEQETSLARQRTELEKLAKECGFDVIKVIAEQASGYEADRDGVLE
CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHH
LLALCEEEEVDALLIQDETRLGRGHARMAVLHCLKKRGVKIYSASHHGEMPLSEADEMVL
HHHHHCHHCCCEEEECCHHHHCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHH
SIIAIVEEYQRKIHNAKIKRGMQRAIARGYRPERNLTRRGENAGRDRIELPVEEIVRLRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHH
RGLTFADIAATLRSFGYEASKATVHRRYQEYMDEQQGRH
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVMKAVIYCRVSTDKTEQETSLARQRTELEKLAKECGFDVIKVIAEQASGYEADRDGVLE
CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHH
LLALCEEEEVDALLIQDETRLGRGHARMAVLHCLKKRGVKIYSASHHGEMPLSEADEMVL
HHHHHCHHCCCEEEECCHHHHCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHH
SIIAIVEEYQRKIHNAKIKRGMQRAIARGYRPERNLTRRGENAGRDRIELPVEEIVRLRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHH
RGLTFADIAATLRSFGYEASKATVHRRYQEYMDEQQGRH
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969507; 9384377 [H]