Click here to switch to the map view.

The map label for this gene is yloU [H]

Identifier: 138894702

GI number: 138894702

Start: 1103175

End: 1103537

Strand: Direct

Name: yloU [H]

Synonym: GTNG_1034

Alternate gene names: 138894702

Gene position: 1103175-1103537 (Clockwise)

Preceding gene: 138894700

Following gene: 138894703

Centisome position: 31.07

GC content: 49.04

Gene sequence:

>363_bases
ATGTCGATCGAATGGCAAACAAAACATGGGCGCATTGAAATCTCCAATGAAGTCATTGCCATGATTGCGGGGGGAGCGGC
CGTCGATTGCTACGGCATTGTTGGAATGGCGTCCAAAAACCAAATTCGCGATGGGTTGTCGGAAATTTTGCGCCGTGAAA
ACTTCTCCAAAGGGGTCATCGTCCGGGAGGAAAACGGCGAAGTACATATCGATATGTACATCATCGTCAGCTACGGGACG
AAAATTTCCGAAGTCGCCCATAACGTGCAATCAAAAGTAAAGTATACGCTCGACCAAACGCTCGGGTTGGCGGTTCAGTC
AATCAACATTTACGTTCAAGGGGTTCGGGTGACGAATCCGTAG

Upstream 100 bases:

>100_bases
GCTAAATAATACTAGTGGGTGGCCGGAGCGCTTTGAAAACGGTAAGCATTATAGTACAATAAGAAATGCTGTGCGATGAT
ACGAAAAAGGGGGAACGAGC

Downstream 100 bases:

>100_bases
TAAGGAGGAATTAGTCGGTGACAATGAGGACGCTTGACGGAAGACGGTTTGCCGATATGGTGCAGCAAGGGGCCGCGCAC
TTAGCGAACAACGCCAAAGT

Product: putative alkaline-shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MSIEWQTKHGRIEISNEVIAMIAGGAAVDCYGIVGMASKNQIRDGLSEILRRENFSKGVIVREENGEVHIDMYIIVSYGT
KISEVAHNVQSKVKYTLDQTLGLAVQSINIYVQGVRVTNP

Sequences:

>Translated_120_residues
MSIEWQTKHGRIEISNEVIAMIAGGAAVDCYGIVGMASKNQIRDGLSEILRRENFSKGVIVREENGEVHIDMYIIVSYGT
KISEVAHNVQSKVKYTLDQTLGLAVQSINIYVQGVRVTNP
>Mature_119_residues
SIEWQTKHGRIEISNEVIAMIAGGAAVDCYGIVGMASKNQIRDGLSEILRRENFSKGVIVREENGEVHIDMYIIVSYGTK
ISEVAHNVQSKVKYTLDQTLGLAVQSINIYVQGVRVTNP

Specific function: Unknown

COG id: COG1302

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the asp23 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005531 [H]

Pfam domain/function: PF03780 DUF322 [H]

EC number: NA

Molecular weight: Translated: 13265; Mature: 13134

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEWQTKHGRIEISNEVIAMIAGGAAVDCYGIVGMASKNQIRDGLSEILRRENFSKGVI
CCCEEECCCCEEEECCEEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEE
VREENGEVHIDMYIIVSYGTKISEVAHNVQSKVKYTLDQTLGLAVQSINIYVQGVRVTNP
EEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEECCC
>Mature Secondary Structure 
SIEWQTKHGRIEISNEVIAMIAGGAAVDCYGIVGMASKNQIRDGLSEILRRENFSKGVI
CCEEECCCCEEEECCEEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEE
VREENGEVHIDMYIIVSYGTKISEVAHNVQSKVKYTLDQTLGLAVQSINIYVQGVRVTNP
EEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]