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The map label for this gene is rpe [H]

Identifier: 138894699

GI number: 138894699

Start: 1101107

End: 1101763

Strand: Direct

Name: rpe [H]

Synonym: GTNG_1031

Alternate gene names: 138894699

Gene position: 1101107-1101763 (Clockwise)

Preceding gene: 138894698

Following gene: 138894700

Centisome position: 31.01

GC content: 52.21

Gene sequence:

>657_bases
ATGATTCGGATTGCGCCATCGATTTTATCGGCCGACTTTGCCCGTTTGGCCGAAGAGATTCGTTCTGTTGAAGAAGGTGG
GGCCGACTGGATTCATGTTGATGTAATGGACGGACATTTTGTGCCGAACTTGACGCTCGGTCCGCCGATTGTGGCTGCCA
TTCGTCCAGTGACGAAGCTGCCGTTGGACGTCCATTTAATGATCACTGATCCGGACCGATATATTCCAGCATTTGTCGAG
GCGGGGGCTGATCTCATTTCCGTCCATGTCGAGGCGTGTGTGCATTTGCATCGGACGATCCATTTTATTAAAGAACAAAG
CGTCAAAGCAGGAGTCGTGTTAAACCCGCATACGCCGGTTGACATGATCCGACATGTAATTGCCGATGTTGATCTCGTTT
TATTGATGTCGGTCAACCCAGGGTTTGGAGGACAGGCGTTTATTCCGGCTGTGGTGCCGAAAATCCGCGAGGTTGCTCGG
CTGGCTAATGAGCAGAACAAGAAGATCGATATTGAGGTGGATGGCGGTGTCAACGCGAAAACGGCGCCGCTTTGCGTCGA
AGCAGGTGCCAACGTGCTTGTTGCTGGATCAGCCATTTACAATAATCCCGACAGGGCGGCCGCCATTCGCGCTCTCCGTG
AAGTATGCACCAGATAG

Upstream 100 bases:

>100_bases
GCGCGAAGCGGCGGAGGCCGGGGACATCGCACCGTACCGCTATGACCATTATTTAAGTTTTGTCGCTGAAATGAAAGAAC
GAAAGCCGAGGTATTAAACA

Downstream 100 bases:

>100_bases
CGTTAGAGGCGGCGCTCAACGTTCTAAATATACTTCACATTTGCCATTCTAAGGAGGGCAATGGTCAGTCAAACATCGAT
TTACAGGATGAAAAAGGCAC

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MIRIAPSILSADFARLAEEIRSVEEGGADWIHVDVMDGHFVPNLTLGPPIVAAIRPVTKLPLDVHLMITDPDRYIPAFVE
AGADLISVHVEACVHLHRTIHFIKEQSVKAGVVLNPHTPVDMIRHVIADVDLVLLMSVNPGFGGQAFIPAVVPKIREVAR
LANEQNKKIDIEVDGGVNAKTAPLCVEAGANVLVAGSAIYNNPDRAAAIRALREVCTR

Sequences:

>Translated_218_residues
MIRIAPSILSADFARLAEEIRSVEEGGADWIHVDVMDGHFVPNLTLGPPIVAAIRPVTKLPLDVHLMITDPDRYIPAFVE
AGADLISVHVEACVHLHRTIHFIKEQSVKAGVVLNPHTPVDMIRHVIADVDLVLLMSVNPGFGGQAFIPAVVPKIREVAR
LANEQNKKIDIEVDGGVNAKTAPLCVEAGANVLVAGSAIYNNPDRAAAIRALREVCTR
>Mature_218_residues
MIRIAPSILSADFARLAEEIRSVEEGGADWIHVDVMDGHFVPNLTLGPPIVAAIRPVTKLPLDVHLMITDPDRYIPAFVE
AGADLISVHVEACVHLHRTIHFIKEQSVKAGVVLNPHTPVDMIRHVIADVDLVLLMSVNPGFGGQAFIPAVVPKIREVAR
LANEQNKKIDIEVDGGVNAKTAPLCVEAGANVLVAGSAIYNNPDRAAAIRALREVCTR

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=218, Percent_Identity=39.9082568807339, Blast_Score=170, Evalue=1e-42,
Organism=Homo sapiens, GI219879828, Length=218, Percent_Identity=37.6146788990826, Blast_Score=160, Evalue=8e-40,
Organism=Homo sapiens, GI24307923, Length=173, Percent_Identity=32.9479768786127, Blast_Score=103, Evalue=2e-22,
Organism=Escherichia coli, GI1789788, Length=216, Percent_Identity=48.6111111111111, Blast_Score=209, Evalue=9e-56,
Organism=Escherichia coli, GI1790523, Length=205, Percent_Identity=38.5365853658537, Blast_Score=164, Evalue=5e-42,
Organism=Escherichia coli, GI1790754, Length=204, Percent_Identity=31.8627450980392, Blast_Score=103, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17552948, Length=215, Percent_Identity=37.6744186046512, Blast_Score=156, Evalue=9e-39,
Organism=Saccharomyces cerevisiae, GI6322341, Length=228, Percent_Identity=37.280701754386, Blast_Score=169, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24586301, Length=214, Percent_Identity=40.1869158878505, Blast_Score=175, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23511; Mature: 23511

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRIAPSILSADFARLAEEIRSVEEGGADWIHVDVMDGHFVPNLTLGPPIVAAIRPVTKL
CEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHCHHHHC
PLDVHLMITDPDRYIPAFVEAGADLISVHVEACVHLHRTIHFIKEQSVKAGVVLNPHTPV
CEEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCH
DMIRHVIADVDLVLLMSVNPGFGGQAFIPAVVPKIREVARLANEQNKKIDIEVDGGVNAK
HHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
TAPLCVEAGANVLVAGSAIYNNPDRAAAIRALREVCTR
CCCEEEECCCCEEEECCHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRIAPSILSADFARLAEEIRSVEEGGADWIHVDVMDGHFVPNLTLGPPIVAAIRPVTKL
CEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHCHHHHC
PLDVHLMITDPDRYIPAFVEAGADLISVHVEACVHLHRTIHFIKEQSVKAGVVLNPHTPV
CEEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCH
DMIRHVIADVDLVLLMSVNPGFGGQAFIPAVVPKIREVARLANEQNKKIDIEVDGGVNAK
HHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
TAPLCVEAGANVLVAGSAIYNNPDRAAAIRALREVCTR
CCCEEEECCCCEEEECCHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]