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The map label for this gene is rsgA

Identifier: 138894698

GI number: 138894698

Start: 1100222

End: 1101103

Strand: Direct

Name: rsgA

Synonym: GTNG_1030

Alternate gene names: 138894698

Gene position: 1100222-1101103 (Clockwise)

Preceding gene: 138894697

Following gene: 138894699

Centisome position: 30.99

GC content: 51.93

Gene sequence:

>882_bases
ATGGCAGAAGGGCAAATTATTAAAGCGTTAAGCGGGTTTTATTATGTCCTCTCTGAAGGCAAGGTGTTTCAATGCCGGGG
GCGGGGCGTGTTTCGTAAGCAAAAAGTGACGCCGCTTGTCGGCGACCGGGTCGTCTTTACAGCGACGGGTGAGGCGGAAG
GATATATTTTGGAGATTTGTGAACGCCAAAATGAATTAGTGCGGCCGCCGGTTGCCAACGTTGAACAGGCGATTTTAGTT
TTTTCGGCCGTAAGCCCTGATTTCAGCGCCAAGCTGCTAGATCGCTTTCTTGTTTTAGTCGAATCAAAGAACATTACCCC
CGTCATTGTCATTAGCAAAATCGACTTGCTTGATGGGGGAATGAAAGAGACGATCGCTCAATATGTGCGTGATTACCGGC
ACATCGGCTATGAGGTAATTGAGACATCAACGGTGACAAAAGAAGGTCTCGACGAGCTGATGTCGCACCTTTGTGGCCGC
GTTTCTGTCGTTGCCGGGCAGTCGGGTGTCGGCAAGTCATCGTTGCTCAACGCTCTCCGTCCGGACTTGCAATTGAAAAC
GGGCGATATTTCGACCCATTTAGGGCGCGGTAAACATACGACCCGCCATGTCGAGCTGCTTGCGATCGCCGGTGGGCTCG
TTGCCGATACCCCGGGGTTTAGCGCGCTGGAGTTTGACCATATTGAGCTTGATGAGTTGCCGTATTACTTTCCAGAATTT
CGGGCGTACGGAGAAGGGTGCAAGTTCCGTGGCTGCCTCCACGTCGCTGAACCAAAATGTGCGGTGCGCGAAGCGGCGGA
GGCCGGGGACATCGCACCGTACCGCTATGACCATTATTTAAGTTTTGTCGCTGAAATGAAAGAACGAAAGCCGAGGTATT
AA

Upstream 100 bases:

>100_bases
TACGGGGAGACGGCCTATTACCGCGTCATTGTCAACAATGTCGTCAAAGATGAAGGGACGATTCCGTATCCAGAAAACGG
CGGAAAAAAGGAGTGAAGCT

Downstream 100 bases:

>100_bases
ACAATGATTCGGATTGCGCCATCGATTTTATCGGCCGACTTTGCCCGTTTGGCCGAAGAGATTCGTTCTGTTGAAGAAGG
TGGGGCCGACTGGATTCATG

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MAEGQIIKALSGFYYVLSEGKVFQCRGRGVFRKQKVTPLVGDRVVFTATGEAEGYILEICERQNELVRPPVANVEQAILV
FSAVSPDFSAKLLDRFLVLVESKNITPVIVISKIDLLDGGMKETIAQYVRDYRHIGYEVIETSTVTKEGLDELMSHLCGR
VSVVAGQSGVGKSSLLNALRPDLQLKTGDISTHLGRGKHTTRHVELLAIAGGLVADTPGFSALEFDHIELDELPYYFPEF
RAYGEGCKFRGCLHVAEPKCAVREAAEAGDIAPYRYDHYLSFVAEMKERKPRY

Sequences:

>Translated_293_residues
MAEGQIIKALSGFYYVLSEGKVFQCRGRGVFRKQKVTPLVGDRVVFTATGEAEGYILEICERQNELVRPPVANVEQAILV
FSAVSPDFSAKLLDRFLVLVESKNITPVIVISKIDLLDGGMKETIAQYVRDYRHIGYEVIETSTVTKEGLDELMSHLCGR
VSVVAGQSGVGKSSLLNALRPDLQLKTGDISTHLGRGKHTTRHVELLAIAGGLVADTPGFSALEFDHIELDELPYYFPEF
RAYGEGCKFRGCLHVAEPKCAVREAAEAGDIAPYRYDHYLSFVAEMKERKPRY
>Mature_292_residues
AEGQIIKALSGFYYVLSEGKVFQCRGRGVFRKQKVTPLVGDRVVFTATGEAEGYILEICERQNELVRPPVANVEQAILVF
SAVSPDFSAKLLDRFLVLVESKNITPVIVISKIDLLDGGMKETIAQYVRDYRHIGYEVIETSTVTKEGLDELMSHLCGRV
SVVAGQSGVGKSSLLNALRPDLQLKTGDISTHLGRGKHTTRHVELLAIAGGLVADTPGFSALEFDHIELDELPYYFPEFR
AYGEGCKFRGCLHVAEPKCAVREAAEAGDIAPYRYDHYLSFVAEMKERKPRY

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain

Homologues:

Organism=Escherichia coli, GI87082381, Length=292, Percent_Identity=39.7260273972603, Blast_Score=179, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSGA_GEOTN (A4IM52)

Other databases:

- EMBL:   CP000557
- RefSeq:   YP_001125151.1
- ProteinModelPortal:   A4IM52
- SMR:   A4IM52
- STRING:   A4IM52
- GeneID:   4965972
- GenomeReviews:   CP000557_GR
- KEGG:   gtn:GTNG_1030
- NMPDR:   fig|420246.5.peg.1000
- eggNOG:   COG1162
- HOGENOM:   HBG652450
- OMA:   FRDCKHL
- PhylomeDB:   A4IM52
- ProtClustDB:   PRK00098
- BioCyc:   GTHE420246:GTNG_1030-MONOMER
- HAMAP:   MF_01820
- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881
- Gene3D:   G3DSA:2.40.50.140
- TIGRFAMs:   TIGR00157

Pfam domain/function: PF03193 DUF258; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 32492; Mature: 32361

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEGQIIKALSGFYYVLSEGKVFQCRGRGVFRKQKVTPLVGDRVVFTATGEAEGYILEIC
CCCCHHHHHHHHEEEEECCCCEEEECCCCCHHHCCCCCCCCCEEEEEECCCCCCHHHHHH
ERQNELVRPPVANVEQAILVFSAVSPDFSAKLLDRFLVLVESKNITPVIVISKIDLLDGG
HHCCCCCCCCCCCHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECHHCCC
MKETIAQYVRDYRHIGYEVIETSTVTKEGLDELMSHLCGRVSVVAGQSGVGKSSLLNALR
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHC
PDLQLKTGDISTHLGRGKHTTRHVELLAIAGGLVADTPGFSALEFDHIELDELPYYFPEF
CCCEEECCCCHHHCCCCCCCHHHEEEEEEECCCEECCCCCCEEEECCCCHHHCCCCCHHH
RAYGEGCKFRGCLHVAEPKCAVREAAEAGDIAPYRYDHYLSFVAEMKERKPRY
HHHCCCCCEECEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AEGQIIKALSGFYYVLSEGKVFQCRGRGVFRKQKVTPLVGDRVVFTATGEAEGYILEIC
CCCHHHHHHHHEEEEECCCCEEEECCCCCHHHCCCCCCCCCEEEEEECCCCCCHHHHHH
ERQNELVRPPVANVEQAILVFSAVSPDFSAKLLDRFLVLVESKNITPVIVISKIDLLDGG
HHCCCCCCCCCCCHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECHHCCC
MKETIAQYVRDYRHIGYEVIETSTVTKEGLDELMSHLCGRVSVVAGQSGVGKSSLLNALR
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHC
PDLQLKTGDISTHLGRGKHTTRHVELLAIAGGLVADTPGFSALEFDHIELDELPYYFPEF
CCCEEECCCCHHHCCCCCCCHHHEEEEEEECCCEECCCCCCEEEECCCCHHHCCCCCHHH
RAYGEGCKFRGCLHVAEPKCAVREAAEAGDIAPYRYDHYLSFVAEMKERKPRY
HHHCCCCCEECEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA