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The map label for this gene is yloC [H]

Identifier: 138894686

GI number: 138894686

Start: 1087894

End: 1088769

Strand: Direct

Name: yloC [H]

Synonym: GTNG_1018

Alternate gene names: 138894686

Gene position: 1087894-1088769 (Clockwise)

Preceding gene: 138894685

Following gene: 138894687

Centisome position: 30.64

GC content: 54.68

Gene sequence:

>876_bases
ATGGTTTACAGCATGACTGGTTTTGGCACGAGCACGAAAAAAACGGATCGCTTAATGGTGACGGTGGAAATGAAATCGGT
CAACCACCGGTTTTGCGAAATTTCCATACGCCTACCTAGACAATGGCTCGTGTTTGAAGATAAAATAAAAAAAGCGATTT
TGCCGTATGTGCGGCGCGGGAAAGTCGAAGTGTTCGTCACGATCGCCGGCGAAGGGCTCGTAAAGCGGAAAATACATATC
GATTGGGATTTGCTCGCCCAATATTGGGCTGGACTGCAGGAAGCAGCCAAGCGGTTTTCCCTTGACGGCAATGTGACGAC
AGCCGAGTTGCTTCGGCTTAACGGGGCAGTCGAAGTCGTCGAAGAGGAAGGCGGCAATGAGGAGATCGAGCCGCTTCTCC
TCGCCGCTGTCGATGAGGCGGCAAGGGCGCTGATGGCCATGCGTCAACAAGAAGGGAAGGCGCTCGTCGCCGATTTGCGC
GCCCGTCTGCACGAGATCGAGGCTGGTGTTACTGCCATTGAACAGCGGGCGCCACTTGTTGTGGAACAATACCGTGAGCG
GCTGACACGCCGCCTGCGTGAATGGGTGCCCGCCGCGGTCGACGAGGCACGTTTGCTCACGGAAGTGGCGGTGTTTGCCG
AAAAAGCAGACATTAACGAAGAATTGAAGCGCATCCGCAGCCATTTGATGCAAATGGCAGATGCGCTTGAAACAGACGAA
CCAGTCGGGCGGAAGCTGGACTTTTTAGTGCAGGAGTTGAACCGCGAAGTGAACACGATCGGCGCCAAGGCGAATGACAG
CGTCATTGCTGCGCAAGTCGTCGAGATGAAAAGCGCGCTCGAGAAAATGCGCGAGCAAGTGCAAAACGTGGAATAG

Upstream 100 bases:

>100_bases
GAGAAAATAAATAACGTATATGGTATAATGAAAAAGGTGATAGAGGTATGCTCTATGGCCTTTTCTTTTTTTCATCAATG
ACAGCAACGGGTGTGATGGC

Downstream 100 bases:

>100_bases
CCGTTTAAAACGGCTTGCTAGCGGCAACAATAACGAATATGGCAGGTGGGCGTGTCATGATGATGAAGTTTATTAATATC
GGATACGGAAACATGGTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MVYSMTGFGTSTKKTDRLMVTVEMKSVNHRFCEISIRLPRQWLVFEDKIKKAILPYVRRGKVEVFVTIAGEGLVKRKIHI
DWDLLAQYWAGLQEAAKRFSLDGNVTTAELLRLNGAVEVVEEEGGNEEIEPLLLAAVDEAARALMAMRQQEGKALVADLR
ARLHEIEAGVTAIEQRAPLVVEQYRERLTRRLREWVPAAVDEARLLTEVAVFAEKADINEELKRIRSHLMQMADALETDE
PVGRKLDFLVQELNREVNTIGAKANDSVIAAQVVEMKSALEKMREQVQNVE

Sequences:

>Translated_291_residues
MVYSMTGFGTSTKKTDRLMVTVEMKSVNHRFCEISIRLPRQWLVFEDKIKKAILPYVRRGKVEVFVTIAGEGLVKRKIHI
DWDLLAQYWAGLQEAAKRFSLDGNVTTAELLRLNGAVEVVEEEGGNEEIEPLLLAAVDEAARALMAMRQQEGKALVADLR
ARLHEIEAGVTAIEQRAPLVVEQYRERLTRRLREWVPAAVDEARLLTEVAVFAEKADINEELKRIRSHLMQMADALETDE
PVGRKLDFLVQELNREVNTIGAKANDSVIAAQVVEMKSALEKMREQVQNVE
>Mature_291_residues
MVYSMTGFGTSTKKTDRLMVTVEMKSVNHRFCEISIRLPRQWLVFEDKIKKAILPYVRRGKVEVFVTIAGEGLVKRKIHI
DWDLLAQYWAGLQEAAKRFSLDGNVTTAELLRLNGAVEVVEEEGGNEEIEPLLLAAVDEAARALMAMRQQEGKALVADLR
ARLHEIEAGVTAIEQRAPLVVEQYRERLTRRLREWVPAAVDEARLLTEVAVFAEKADINEELKRIRSHLMQMADALETDE
PVGRKLDFLVQELNREVNTIGAKANDSVIAAQVVEMKSALEKMREQVQNVE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=297, Percent_Identity=31.6498316498317, Blast_Score=131, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 32977; Mature: 32977

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYSMTGFGTSTKKTDRLMVTVEMKSVNHRFCEISIRLPRQWLVFEDKIKKAILPYVRRG
CEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCC
KVEVFVTIAGEGLVKRKIHIDWDLLAQYWAGLQEAAKRFSLDGNVTTAELLRLNGAVEVV
CEEEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHEEE
EEEGGNEEIEPLLLAAVDEAARALMAMRQQEGKALVADLRARLHEIEAGVTAIEQRAPLV
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VEQYRERLTRRLREWVPAAVDEARLLTEVAVFAEKADINEELKRIRSHLMQMADALETDE
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
PVGRKLDFLVQELNREVNTIGAKANDSVIAAQVVEMKSALEKMREQVQNVE
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVYSMTGFGTSTKKTDRLMVTVEMKSVNHRFCEISIRLPRQWLVFEDKIKKAILPYVRRG
CEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCC
KVEVFVTIAGEGLVKRKIHIDWDLLAQYWAGLQEAAKRFSLDGNVTTAELLRLNGAVEVV
CEEEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHEEE
EEEGGNEEIEPLLLAAVDEAARALMAMRQQEGKALVADLRARLHEIEAGVTAIEQRAPLV
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VEQYRERLTRRLREWVPAAVDEARLLTEVAVFAEKADINEELKRIRSHLMQMADALETDE
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
PVGRKLDFLVQELNREVNTIGAKANDSVIAAQVVEMKSALEKMREQVQNVE
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]