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The map label for this gene is sbp [H]

Identifier: 138894658

GI number: 138894658

Start: 1054942

End: 1055304

Strand: Direct

Name: sbp [H]

Synonym: GTNG_0988

Alternate gene names: 138894658

Gene position: 1054942-1055304 (Clockwise)

Preceding gene: 138894657

Following gene: 138894659

Centisome position: 29.71

GC content: 46.83

Gene sequence:

>363_bases
ATGTGGCTCCCGCTTCTCGGGATGTTGCTCGGGTTTGCTGTCGGCGTTCTCGCCGGCTGGGAAATTCCCGATGAGTATTC
TAATTATTTGTCAATTGCTATTTTGGCGGCCTTTGATACATTAATCGGAGGATGGCGCGCCCATTTACAGCGGACATACG
ACGAACTTGTATTTATAACCGGGTTTTTTTTCAACATTATCCTTGCCACAACTTTAACTTTTCTTGGGATACATCTTGGT
GTAGACTTGTATTTAGCGGCTGTGTTTGCGTTTGGTGTCCGCCTTTTTCAAAACATTGCCATCATCCGCCGCCTTTGGCT
TGCCGAATGGGCGGAGCGGCGGCAAAATCGTGAAAAAAGTTAA

Upstream 100 bases:

>100_bases
ATTTCCAAACCGAAGTCGGTGATCGTCATTCCACCATCAACTGAACGGCCGGACGTAAAATACATGGAGACGGCGAGCGC
CGGCAAGGAGGAGAAGTAGC

Downstream 100 bases:

>100_bases
GCAAAAGACAGGGAAAGCCTTTTGGCATGTTGAATTATATGGAGTAAAACAAAATATGGTGTTTTTGCGGAATTTATAAA
CTAGACATAGACAAAGAGAT

Product: small basic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MWLPLLGMLLGFAVGVLAGWEIPDEYSNYLSIAILAAFDTLIGGWRAHLQRTYDELVFITGFFFNIILATTLTFLGIHLG
VDLYLAAVFAFGVRLFQNIAIIRRLWLAEWAERRQNREKS

Sequences:

>Translated_120_residues
MWLPLLGMLLGFAVGVLAGWEIPDEYSNYLSIAILAAFDTLIGGWRAHLQRTYDELVFITGFFFNIILATTLTFLGIHLG
VDLYLAAVFAFGVRLFQNIAIIRRLWLAEWAERRQNREKS
>Mature_120_residues
MWLPLLGMLLGFAVGVLAGWEIPDEYSNYLSIAILAAFDTLIGGWRAHLQRTYDELVFITGFFFNIILATTLTFLGIHLG
VDLYLAAVFAFGVRLFQNIAIIRRLWLAEWAERRQNREKS

Specific function: Unknown

COG id: COG3856

COG function: function code S; Uncharacterized conserved protein (small basic protein)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sbp family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009709 [H]

Pfam domain/function: PF06947 DUF1290 [H]

EC number: NA

Molecular weight: Translated: 13723; Mature: 13723

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLPLLGMLLGFAVGVLAGWEIPDEYSNYLSIAILAAFDTLIGGWRAHLQRTYDELVFIT
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFFFNIILATTLTFLGIHLGVDLYLAAVFAFGVRLFQNIAIIRRLWLAEWAERRQNREKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MWLPLLGMLLGFAVGVLAGWEIPDEYSNYLSIAILAAFDTLIGGWRAHLQRTYDELVFIT
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFFFNIILATTLTFLGIHLGVDLYLAAVFAFGVRLFQNIAIIRRLWLAEWAERRQNREKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3139638; 9384377; 1569582 [H]