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The map label for this gene is kstR2 [H]

Identifier: 138894563

GI number: 138894563

Start: 969666

End: 970241

Strand: Direct

Name: kstR2 [H]

Synonym: GTNG_0893

Alternate gene names: 138894563

Gene position: 969666-970241 (Clockwise)

Preceding gene: 138894562

Following gene: 138894564

Centisome position: 27.31

GC content: 46.35

Gene sequence:

>576_bases
ATGAGGGAAAAAATTATCGCTGCCAGCATTGAATTATTTGAACAAAACGGGTTTAGCGAAACGTCGATTCAAGATATTGT
CGATGCTCTCGGGGTGACGAAAGGGACGTTTTACTACTATTTCAAAAGCAAAGAAGAGCTGCTCATGGACATTCATCTTC
GCTACATTGAAGGGCTGCTTAGCGAACAGGCGCGCATTATGAATGATGAGCAGCGGACGATGCGGGAAAAGTTGTACGCC
ATCGTTTATATGCTCATTCATAATGTCGAGCGGCAAGGAAGACAGGCGCGCATTTTTTTCCGTGAGATGAAGCATTTAAG
CGAGGAACATTTGCAAAAAGTGAAAGAAAAGCGCGATTTGTTCCGCTATCATCTGCAGGCGTTAATTGAAGAAGGAATGA
AAACTGGCGAACTGCGCCGCGATTTGTCGCCATCGATTGCTACCCTTACTGTGCTTGGGGCGGCCAATTGGAGCTATCAT
TGGTTTCGTCCGGACGGCGAGCTGACCGATGCTGAAGTGGCGAAACAAATGGTGACGATTTTGATTGAAGGAATGAGTGC
GCCATATACTCGATAG

Upstream 100 bases:

>100_bases
ATGACGAAGGCGCAGTTGACGGCCAGGTCCCGAGCAGGCTTGGCCGTTTTATGGTAAAATAGCTGGCGGTGACTACATGT
AAGGCAAGAGGTGGAAAGAC

Downstream 100 bases:

>100_bases
ACAAGTGAAACGGCGCACACCCAAACGCGTTCGTAAAGGGGGAGAGGGGAGATTGACCGCCATTATTCCGGTTCGCAAAG
GGGAAGAACTGCCAGCCGAA

Product: TetR/AcrR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MREKIIAASIELFEQNGFSETSIQDIVDALGVTKGTFYYYFKSKEELLMDIHLRYIEGLLSEQARIMNDEQRTMREKLYA
IVYMLIHNVERQGRQARIFFREMKHLSEEHLQKVKEKRDLFRYHLQALIEEGMKTGELRRDLSPSIATLTVLGAANWSYH
WFRPDGELTDAEVAKQMVTILIEGMSAPYTR

Sequences:

>Translated_191_residues
MREKIIAASIELFEQNGFSETSIQDIVDALGVTKGTFYYYFKSKEELLMDIHLRYIEGLLSEQARIMNDEQRTMREKLYA
IVYMLIHNVERQGRQARIFFREMKHLSEEHLQKVKEKRDLFRYHLQALIEEGMKTGELRRDLSPSIATLTVLGAANWSYH
WFRPDGELTDAEVAKQMVTILIEGMSAPYTR
>Mature_191_residues
MREKIIAASIELFEQNGFSETSIQDIVDALGVTKGTFYYYFKSKEELLMDIHLRYIEGLLSEQARIMNDEQRTMREKLYA
IVYMLIHNVERQGRQARIFFREMKHLSEEHLQKVKEKRDLFRYHLQALIEEGMKTGELRRDLSPSIATLTVLGAANWSYH
WFRPDGELTDAEVAKQMVTILIEGMSAPYTR

Specific function: Controls the expression of a small regulon that may play a role in the utilization of cholesterol [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22456; Mature: 22456

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREKIIAASIELFEQNGFSETSIQDIVDALGVTKGTFYYYFKSKEELLMDIHLRYIEGLL
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHH
SEQARIMNDEQRTMREKLYAIVYMLIHNVERQGRQARIFFREMKHLSEEHLQKVKEKRDL
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRYHLQALIEEGMKTGELRRDLSPSIATLTVLGAANWSYHWFRPDGELTDAEVAKQMVTI
HHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHEECCCCCEEEECCCCCCCHHHHHHHHHHH
LIEGMSAPYTR
HHHHCCCCCCC
>Mature Secondary Structure
MREKIIAASIELFEQNGFSETSIQDIVDALGVTKGTFYYYFKSKEELLMDIHLRYIEGLL
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHH
SEQARIMNDEQRTMREKLYAIVYMLIHNVERQGRQARIFFREMKHLSEEHLQKVKEKRDL
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRYHLQALIEEGMKTGELRRDLSPSIATLTVLGAANWSYHWFRPDGELTDAEVAKQMVTI
HHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHEECCCCCEEEECCCCCCCHHHHHHHHHHH
LIEGMSAPYTR
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA