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The map label for this gene is bbsG [H]

Identifier: 138894560

GI number: 138894560

Start: 965915

End: 967123

Strand: Direct

Name: bbsG [H]

Synonym: GTNG_0890

Alternate gene names: 138894560

Gene position: 965915-967123 (Clockwise)

Preceding gene: 138894559

Following gene: 138894561

Centisome position: 27.21

GC content: 53.52

Gene sequence:

>1209_bases
ATGGACTTTTCCTATTCGCCGAAAGTCCAAGAGCTGATTAGAAAATTAAGCGCTTTCATGGAGGAGTATATTTATCCGAA
CGAAAAAGTGTACGAGGAGCAGCTGAATGCACAAGAGTCGAGATGGTCAGGCGTGCCACCGATCATCGAAGAGCTAAAGG
AAAAAGCCAAAAAAGAAGGGCTTTGGAATTTGTTTTTGCCGGACAGCGAGTACGGAGCCGGCTTAACGAACGTCGAGTAC
GCACCGCTTTGCGAAATTATGGGCCGTTCCCTTATCGCTCCGGAAGTGTTCAACTGCAATGCGCCGGATACAGGCAACAT
GGAAGTGCTTGTCCGCTACGGTAGCGAGGAGCAAAAACAAAAATGGCTCGTTCCGCTCTTAAACGGGGAAATCCGCTCGT
GCTTCTCAATGACCGAGCCAGATGTGGCGTCAAGCGATGCGACGAATATTCGTGCGTCGATCATCCGTGACGGTGACGAA
TATGTCATTACCGGACGGAAATGGTGGTCGTCCGGCGCCGGTGACCCGCGCTGCAAAGTGGCCATCGTCATGGGCAAAAC
GAACCCGGACGCCCCAAAACATGAACAGCAGTCGATGATCATCGTTCCACTCGATACACCAGGTGTGAAAATCGAACGGA
TGTTGCCGGTGTTTGGCTTTGATCATGCGCCGCACGGACATGCGGAGATTACATATGATCACGTGCGGGTGCCGAAAGAA
AACATCATTTGGGGGGAAGGAAAAGGGTTCGCTATCGCCCAAGGAAGGCTCGGTCCAGGACGGATTCACCATTGCATGCG
CCTCATTGGTGCGGCGGAACGAGCGCTTGAGCTCATGTGCCGGCGTGTGCAGTCGCGGGTAGCGTTCGGCAAGCCGCTCG
CTGAGCATGGCGTGATCCGCGATTGGATCGCCCAGTCGCGCATCGAGATTGAGCAGGCGCGCCTGTTGACAATGAAAGCA
GCGTACATGATGGATACAGTCGGTAACAAGGTTGCGCGTAAAGAAATTGCCATGATTAAAGTTGTCGCTCCAAATGTCGC
CTTAAAAGTGATTGATCGCGCCATTCAAGCGTTCGGTGCCGCCGGGGTGAGCAACGACTTCCCGCTTGCCGCCATGTGGG
CGAACTCGCGCACGCTCCGTCTCGCTGATGGGCCAGACGAAGTGCATAAAGAGCAAGTTGCAAAGCTTGAACTGCGTCAA
TATCAATAG

Upstream 100 bases:

>100_bases
TAAATATATTTATCAAAAAATATTGAATATTAATTCTTATCGAGGTATAGTAGAAGTAAGAATAACATACTAACCGGTTG
GTATAAAGGGAGGGGAGGGC

Downstream 100 bases:

>100_bases
CATGGGGGAGGAAGTGGCGTTCATGCATGTGCTCGACTTATTTAAAATTGGAGGAAAAACGGCCATCGTCACCGGTGGTG
GGCGAGGTCTCGGTGAACAA

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MDFSYSPKVQELIRKLSAFMEEYIYPNEKVYEEQLNAQESRWSGVPPIIEELKEKAKKEGLWNLFLPDSEYGAGLTNVEY
APLCEIMGRSLIAPEVFNCNAPDTGNMEVLVRYGSEEQKQKWLVPLLNGEIRSCFSMTEPDVASSDATNIRASIIRDGDE
YVITGRKWWSSGAGDPRCKVAIVMGKTNPDAPKHEQQSMIIVPLDTPGVKIERMLPVFGFDHAPHGHAEITYDHVRVPKE
NIIWGEGKGFAIAQGRLGPGRIHHCMRLIGAAERALELMCRRVQSRVAFGKPLAEHGVIRDWIAQSRIEIEQARLLTMKA
AYMMDTVGNKVARKEIAMIKVVAPNVALKVIDRAIQAFGAAGVSNDFPLAAMWANSRTLRLADGPDEVHKEQVAKLELRQ
YQ

Sequences:

>Translated_402_residues
MDFSYSPKVQELIRKLSAFMEEYIYPNEKVYEEQLNAQESRWSGVPPIIEELKEKAKKEGLWNLFLPDSEYGAGLTNVEY
APLCEIMGRSLIAPEVFNCNAPDTGNMEVLVRYGSEEQKQKWLVPLLNGEIRSCFSMTEPDVASSDATNIRASIIRDGDE
YVITGRKWWSSGAGDPRCKVAIVMGKTNPDAPKHEQQSMIIVPLDTPGVKIERMLPVFGFDHAPHGHAEITYDHVRVPKE
NIIWGEGKGFAIAQGRLGPGRIHHCMRLIGAAERALELMCRRVQSRVAFGKPLAEHGVIRDWIAQSRIEIEQARLLTMKA
AYMMDTVGNKVARKEIAMIKVVAPNVALKVIDRAIQAFGAAGVSNDFPLAAMWANSRTLRLADGPDEVHKEQVAKLELRQ
YQ
>Mature_402_residues
MDFSYSPKVQELIRKLSAFMEEYIYPNEKVYEEQLNAQESRWSGVPPIIEELKEKAKKEGLWNLFLPDSEYGAGLTNVEY
APLCEIMGRSLIAPEVFNCNAPDTGNMEVLVRYGSEEQKQKWLVPLLNGEIRSCFSMTEPDVASSDATNIRASIIRDGDE
YVITGRKWWSSGAGDPRCKVAIVMGKTNPDAPKHEQQSMIIVPLDTPGVKIERMLPVFGFDHAPHGHAEITYDHVRVPKE
NIIWGEGKGFAIAQGRLGPGRIHHCMRLIGAAERALELMCRRVQSRVAFGKPLAEHGVIRDWIAQSRIEIEQARLLTMKA
AYMMDTVGNKVARKEIAMIKVVAPNVALKVIDRAIQAFGAAGVSNDFPLAAMWANSRTLRLADGPDEVHKEQVAKLELRQ
YQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI211971008, Length=402, Percent_Identity=63.4328358208955, Blast_Score=527, Evalue=1e-150,
Organism=Homo sapiens, GI48976061, Length=402, Percent_Identity=63.4328358208955, Blast_Score=526, Evalue=1e-150,
Organism=Homo sapiens, GI38505218, Length=402, Percent_Identity=59.2039800995025, Blast_Score=476, Evalue=1e-134,
Organism=Homo sapiens, GI4557233, Length=396, Percent_Identity=28.7878787878788, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI21361497, Length=386, Percent_Identity=28.4974093264249, Blast_Score=143, Evalue=4e-34,
Organism=Homo sapiens, GI187960098, Length=402, Percent_Identity=25.3731343283582, Blast_Score=141, Evalue=9e-34,
Organism=Homo sapiens, GI4557231, Length=402, Percent_Identity=25.3731343283582, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI4501859, Length=364, Percent_Identity=26.6483516483516, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI7656849, Length=352, Percent_Identity=26.1363636363636, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI76496475, Length=403, Percent_Identity=26.5508684863524, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI4557235, Length=408, Percent_Identity=26.2254901960784, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI226958412, Length=391, Percent_Identity=23.5294117647059, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI226958414, Length=360, Percent_Identity=24.1666666666667, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI4501857, Length=373, Percent_Identity=24.3967828418231, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI4503943, Length=284, Percent_Identity=24.2957746478873, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI7669494, Length=262, Percent_Identity=25.1908396946565, Blast_Score=76, Evalue=5e-14,
Organism=Escherichia coli, GI87081958, Length=316, Percent_Identity=27.2151898734177, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1786223, Length=343, Percent_Identity=24.198250728863, Blast_Score=101, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI17562446, Length=365, Percent_Identity=60.2739726027397, Blast_Score=458, Evalue=1e-129,
Organism=Caenorhabditis elegans, GI17534899, Length=403, Percent_Identity=27.0471464019851, Blast_Score=155, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI17569725, Length=402, Percent_Identity=26.1194029850746, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI17508101, Length=390, Percent_Identity=26.4102564102564, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17506239, Length=402, Percent_Identity=26.3681592039801, Blast_Score=127, Evalue=9e-30,
Organism=Caenorhabditis elegans, GI17570075, Length=397, Percent_Identity=23.6775818639798, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17533517, Length=390, Percent_Identity=25.3846153846154, Blast_Score=115, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI71985184, Length=340, Percent_Identity=28.5294117647059, Blast_Score=114, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI17538396, Length=371, Percent_Identity=23.1805929919137, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17551932, Length=297, Percent_Identity=26.2626262626263, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71985192, Length=275, Percent_Identity=28, Blast_Score=98, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17505929, Length=410, Percent_Identity=23.4146341463415, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71990804, Length=266, Percent_Identity=27.8195488721804, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17534353, Length=312, Percent_Identity=25.3205128205128, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI32563615, Length=193, Percent_Identity=29.5336787564767, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI21356377, Length=342, Percent_Identity=30.1169590643275, Blast_Score=140, Evalue=1e-33,
Organism=Drosophila melanogaster, GI24646207, Length=342, Percent_Identity=30.1169590643275, Blast_Score=132, Evalue=4e-31,
Organism=Drosophila melanogaster, GI24660351, Length=393, Percent_Identity=29.2620865139949, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI281363737, Length=338, Percent_Identity=27.810650887574, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24666513, Length=293, Percent_Identity=29.0102389078498, Blast_Score=122, Evalue=3e-28,
Organism=Drosophila melanogaster, GI21355753, Length=294, Percent_Identity=23.8095238095238, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI19920834, Length=287, Percent_Identity=25.4355400696864, Blast_Score=75, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.21 [H]

Molecular weight: Translated: 45056; Mature: 45056

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSYSPKVQELIRKLSAFMEEYIYPNEKVYEEQLNAQESRWSGVPPIIEELKEKAKKEG
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHCC
LWNLFLPDSEYGAGLTNVEYAPLCEIMGRSLIAPEVFNCNAPDTGNMEVLVRYGSEEQKQ
CEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHH
KWLVPLLNGEIRSCFSMTEPDVASSDATNIRASIIRDGDEYVITGRKWWSSGAGDPRCKV
HCCHHHCCCHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCEEE
AIVMGKTNPDAPKHEQQSMIIVPLDTPGVKIERMLPVFGFDHAPHGHAEITYDHVRVPKE
EEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEECHHHCCCCCCCCCCEEEEHHEECCCC
NIIWGEGKGFAIAQGRLGPGRIHHCMRLIGAAERALELMCRRVQSRVAFGKPLAEHGVIR
CEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHH
DWIAQSRIEIEQARLLTMKAAYMMDTVGNKVARKEIAMIKVVAPNVALKVIDRAIQAFGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHC
AGVSNDFPLAAMWANSRTLRLADGPDEVHKEQVAKLELRQYQ
CCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDFSYSPKVQELIRKLSAFMEEYIYPNEKVYEEQLNAQESRWSGVPPIIEELKEKAKKEG
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHCC
LWNLFLPDSEYGAGLTNVEYAPLCEIMGRSLIAPEVFNCNAPDTGNMEVLVRYGSEEQKQ
CEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHH
KWLVPLLNGEIRSCFSMTEPDVASSDATNIRASIIRDGDEYVITGRKWWSSGAGDPRCKV
HCCHHHCCCHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCEEE
AIVMGKTNPDAPKHEQQSMIIVPLDTPGVKIERMLPVFGFDHAPHGHAEITYDHVRVPKE
EEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEECHHHCCCCCCCCCCEEEEHHEECCCC
NIIWGEGKGFAIAQGRLGPGRIHHCMRLIGAAERALELMCRRVQSRVAFGKPLAEHGVIR
CEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHH
DWIAQSRIEIEQARLLTMKAAYMMDTVGNKVARKEIAMIKVVAPNVALKVIDRAIQAFGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHC
AGVSNDFPLAAMWANSRTLRLADGPDEVHKEQVAKLELRQYQ
CCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10629170; 12420174 [H]