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The map label for this gene is oppC [H]

Identifier: 138894365

GI number: 138894365

Start: 773184

End: 774203

Strand: Direct

Name: oppC [H]

Synonym: GTNG_0693

Alternate gene names: 138894365

Gene position: 773184-774203 (Clockwise)

Preceding gene: 138894364

Following gene: 138894366

Centisome position: 21.78

GC content: 47.55

Gene sequence:

>1020_bases
ATGGCGAAACAACAATACGATCAGCTTTCACCGGAATGGTTTCAGCCCGCCCCGCCGAACGTCGGCGAACAAGAAAAAAT
CAATCGTCCAAGCTTGACGTTTTGGCATGACGTATGGCTTCGCCTGCGTGAAAACAAAGCGGCGATCGCCGGGATGATCA
TGATTGTCATTTTGGCTTTACTGGCGATTTTTGCGCCGATGGCCAGTGAACGTTCATATAAAGCACAAAACTTAAGCCAT
GCGAAACTGCCGCCGAAAGTCCCGGTTTTGGAGAATATTAGCTGGCTTAATTTAGATGGAAAAGACCCTAATGGCGTCGA
CGTCTATAAAGAGCGCGGCGTCAAAGAGTACTACTGGTTTGGTACCGATGATTTAGGCCGCGACTTATGGGTGAGAACGT
GGTATGGCACCCGCATTTCGCTTTACATAGGATTACTCGCTGCTGTGATTGATTTGTTTATCGGCATTGCCTACGGCGGT
ATTTCCGGTTATTACGGCGGCCGTGTCGATAACGCAATGCAGCGGGTCATTGAGATTTTAAACGGTATTCCGTATTTGAT
CGTCGTTATTTTATTTATCTTAATTTTTGAGCCGGGGATTATTTCGATTACACTGGCGATGGTCATCACCGGTTGGACGA
CGATGGCGCGTATTGTGCGCGGGCAAATTTTGAAGCTAAAAAACATGGAATATGTGCTCGCTGCACGGACGCTAGGAGCG
TCTAACTCACGGCTCATTTTTAAACATTTGATTCCGAACGTCATGGGCCCGATTATTATTACGACAATGTTTACGATTCC
ATCGGCCATTTTTACGGAGGCGTTTTTGAGCTTTATCGGCCTTGGTATCCGTCCGCCGGAAGCATCGCTCGGCTCACTCG
TTAACGAAGGGTATAAGTCCATTCAAACGTACCCGCATTTAATTATTATCCCGTCGATCGTCATTAGCTTGCTTATTCTG
AGCTTCAACCTTGTCGCTGACGGGCTGCGCGATGCGCTTGACCCGAAAATGCGCAAATAA

Upstream 100 bases:

>100_bases
CGTTGTTTTACTCGGCATTATTAATCTTTGTCATTTTTATCGTGGACATCCTCTATGGAATTGTTGATCCACGCATCCGG
TTAGCGGGAGGGAAGAAATA

Downstream 100 bases:

>100_bases
TGGATGGAAGGGGTGAAAACGATGGAGAAAATTTTACAAGTGAACGATTTACACATTTCCTTCGATATCCATGCCGGCGA
GGTGCAAGCGGTCCGCGGTG

Product: oligopeptide transport system permease OppC

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MAKQQYDQLSPEWFQPAPPNVGEQEKINRPSLTFWHDVWLRLRENKAAIAGMIMIVILALLAIFAPMASERSYKAQNLSH
AKLPPKVPVLENISWLNLDGKDPNGVDVYKERGVKEYYWFGTDDLGRDLWVRTWYGTRISLYIGLLAAVIDLFIGIAYGG
ISGYYGGRVDNAMQRVIEILNGIPYLIVVILFILIFEPGIISITLAMVITGWTTMARIVRGQILKLKNMEYVLAARTLGA
SNSRLIFKHLIPNVMGPIIITTMFTIPSAIFTEAFLSFIGLGIRPPEASLGSLVNEGYKSIQTYPHLIIIPSIVISLLIL
SFNLVADGLRDALDPKMRK

Sequences:

>Translated_339_residues
MAKQQYDQLSPEWFQPAPPNVGEQEKINRPSLTFWHDVWLRLRENKAAIAGMIMIVILALLAIFAPMASERSYKAQNLSH
AKLPPKVPVLENISWLNLDGKDPNGVDVYKERGVKEYYWFGTDDLGRDLWVRTWYGTRISLYIGLLAAVIDLFIGIAYGG
ISGYYGGRVDNAMQRVIEILNGIPYLIVVILFILIFEPGIISITLAMVITGWTTMARIVRGQILKLKNMEYVLAARTLGA
SNSRLIFKHLIPNVMGPIIITTMFTIPSAIFTEAFLSFIGLGIRPPEASLGSLVNEGYKSIQTYPHLIIIPSIVISLLIL
SFNLVADGLRDALDPKMRK
>Mature_338_residues
AKQQYDQLSPEWFQPAPPNVGEQEKINRPSLTFWHDVWLRLRENKAAIAGMIMIVILALLAIFAPMASERSYKAQNLSHA
KLPPKVPVLENISWLNLDGKDPNGVDVYKERGVKEYYWFGTDDLGRDLWVRTWYGTRISLYIGLLAAVIDLFIGIAYGGI
SGYYGGRVDNAMQRVIEILNGIPYLIVVILFILIFEPGIISITLAMVITGWTTMARIVRGQILKLKNMEYVLAARTLGAS
NSRLIFKHLIPNVMGPIIITTMFTIPSAIFTEAFLSFIGLGIRPPEASLGSLVNEGYKSIQTYPHLIIIPSIVISLLILS
FNLVADGLRDALDPKMRK

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=315, Percent_Identity=38.0952380952381, Blast_Score=199, Evalue=2e-52,
Organism=Escherichia coli, GI1787054, Length=310, Percent_Identity=31.9354838709677, Blast_Score=179, Evalue=3e-46,
Organism=Escherichia coli, GI1787760, Length=314, Percent_Identity=31.5286624203822, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI1789964, Length=321, Percent_Identity=32.398753894081, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1788505, Length=218, Percent_Identity=34.4036697247706, Blast_Score=141, Evalue=5e-35,
Organism=Escherichia coli, GI1789889, Length=237, Percent_Identity=32.0675105485232, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1787549, Length=306, Percent_Identity=23.8562091503268, Blast_Score=90, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37963; Mature: 37832

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQQYDQLSPEWFQPAPPNVGEQEKINRPSLTFWHDVWLRLRENKAAIAGMIMIVILAL
CCCCCHHCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LAIFAPMASERSYKAQNLSHAKLPPKVPVLENISWLNLDGKDPNGVDVYKERGVKEYYWF
HHHHHHHHCCCCHHHCCCCCCCCCCCCCHHCCCCEEECCCCCCCCCHHHHHCCCCEEEEC
GTDDLGRDLWVRTWYGTRISLYIGLLAAVIDLFIGIAYGGISGYYGGRVDNAMQRVIEIL
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
NGIPYLIVVILFILIFEPGIISITLAMVITGWTTMARIVRGQILKLKNMEYVLAARTLGA
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
SNSRLIFKHLIPNVMGPIIITTMFTIPSAIFTEAFLSFIGLGIRPPEASLGSLVNEGYKS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
IQTYPHLIIIPSIVISLLILSFNLVADGLRDALDPKMRK
HHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AKQQYDQLSPEWFQPAPPNVGEQEKINRPSLTFWHDVWLRLRENKAAIAGMIMIVILAL
CCCCHHCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LAIFAPMASERSYKAQNLSHAKLPPKVPVLENISWLNLDGKDPNGVDVYKERGVKEYYWF
HHHHHHHHCCCCHHHCCCCCCCCCCCCCHHCCCCEEECCCCCCCCCHHHHHCCCCEEEEC
GTDDLGRDLWVRTWYGTRISLYIGLLAAVIDLFIGIAYGGISGYYGGRVDNAMQRVIEIL
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
NGIPYLIVVILFILIFEPGIISITLAMVITGWTTMARIVRGQILKLKNMEYVLAARTLGA
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
SNSRLIFKHLIPNVMGPIIITTMFTIPSAIFTEAFLSFIGLGIRPPEASLGSLVNEGYKS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
IQTYPHLIIIPSIVISLLILSFNLVADGLRDALDPKMRK
HHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]