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The map label for this gene is gerpD [H]

Identifier: 138894268

GI number: 138894268

Start: 661950

End: 662141

Strand: Reverse

Name: gerpD [H]

Synonym: GTNG_0594

Alternate gene names: 138894268

Gene position: 662141-661950 (Counterclockwise)

Preceding gene: 138894269

Following gene: 138894267

Centisome position: 18.65

GC content: 53.65

Gene sequence:

>192_bases
GTGAATTACACCGTCATCAACCGCGATGTGCACGTCAGCGATATCCATCTTGTGGCGGTCGCCAGCGCCTCACTGTTTTT
AATCGGCGACGCCGATGTGATCAACTTATCATCTGCGTTTGACACACCGCCGGAATCGCTTATTATCGGTCCGTTCGTTC
CGCTCGTGCAGGTTCGAGGGGAAGAATCGTGA

Upstream 100 bases:

>100_bases
ATGAGACGGTCGAAAATGAAATTTTTCAAAAAGTGAAAGCTGACATCGAACAATCGCTTGATGCGTTTCTCAAACATTTG
CCTTCTGGGGGGGGATAAAC

Downstream 100 bases:

>100_bases
AGCGAACGTCAGTTGTGCAAGCATTTCATTCGGAAACAGTAGTCATTAGCTCTGTATTGCAAATCGGCGATTCAGAACGG
ATTTCTGCCCGTACATGCGA

Product: spore germination protein GerPD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 63

Protein sequence:

>63_residues
MNYTVINRDVHVSDIHLVAVASASLFLIGDADVINLSSAFDTPPESLIIGPFVPLVQVRGEES

Sequences:

>Translated_63_residues
MNYTVINRDVHVSDIHLVAVASASLFLIGDADVINLSSAFDTPPESLIIGPFVPLVQVRGEES
>Mature_63_residues
MNYTVINRDVHVSDIHLVAVASASLFLIGDADVINLSSAFDTPPESLIIGPFVPLVQVRGEES

Specific function: Required for the formation of functionally normal spores. Could be involved in the establishment of normal spore coat structure and/or permeability, which allows the access of germinants to their receptor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017257 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6751; Mature: 6751

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYTVINRDVHVSDIHLVAVASASLFLIGDADVINLSSAFDTPPESLIIGPFVPLVQVRG
CCEEEECCCEEECCEEEEEECCCEEEEEECCCEEEECCCCCCCCCCEEEECCCEEEEEEC
EES
CCC
>Mature Secondary Structure
MNYTVINRDVHVSDIHLVAVASASLFLIGDADVINLSSAFDTPPESLIIGPFVPLVQVRG
CCEEEECCCEEECCEEEEEECCCEEEEEECCCEEEECCCCCCCCCCEEEECCCEEEEEEC
EES
CCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9384377; 10715007 [H]