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The map label for this gene is yxkF [H]

Identifier: 138894218

GI number: 138894218

Start: 605631

End: 606518

Strand: Reverse

Name: yxkF [H]

Synonym: GTNG_0544

Alternate gene names: 138894218

Gene position: 606518-605631 (Counterclockwise)

Preceding gene: 138894219

Following gene: 138894217

Centisome position: 17.08

GC content: 48.87

Gene sequence:

>888_bases
ATGTTAAAGGAGCTCGAGTCACTTTATGAAGGGGATATCGTCATTAACGGCCAGCCGGAACACCCAGAGGCATATGAATG
GTTTTACACCGCCGATGGCGATGAAATCGGCATCGCCAAACAGCGGTTAACGAAACGAGAACAGCGATTGTTAGCGCTGT
TTTTGACTCCAACCGAACATCGTCGGGAACGTGAAAGTGAAGAGGAGCGAGTGTGGAAACGGTGGATGGAAAACGGTGAC
CCGTCAGCGCCTGCCATGCTGACCACCCCGTACTGCCGTCTGATTCACTTTACCGTCAATCAGCCGATCACAAATAAAAC
CGAGTTTGCCGAAACGATCCACAACTTGTTTGAGTCCCCGATAACGATCGTTTGGGACAAAGACAAGAACGGACTAATCA
TCGAAGCCAAGCAAAAACGGACGGCTGAACTGCCCTTGCTGGCGGAAATGGCTGACGCGCTCGCCGCCGATTTTTACACT
ACGATCCATCTATTCATCGGCCCGGTTCGCCCTGTCGATGATCGATTACACGAGTCGTTTCTCCTCGAAAAAGAATGTTT
TTCCGCCGCTCGTCGCTTTTGGCCGAAGCAAACGGTGTATGAGTGGGAAGATGCCATTCCACTTCCTCTCCTTAGCGCTG
AGAGCGATGATAAGACCGACCGAATCTTATCGTTCCTTGATCAATTTGATGAAGATGAAATACGAGCGATGGAGACATTT
TTACAATGCAATTTAAACGTCTCCATGGCAGCGAAAAAACTATACATGCACCGAAACAGTTTGCAATACCGGATCGATAA
GTGGACGGAGCAAACCGGTATTGACATCAAGCGATTTAAGGGAGCAGTGGCGATCTACTTAGCTATTTTGCATCGCCGCC
TTACTTAA

Upstream 100 bases:

>100_bases
TATGAAGCAGGCGATTGACCGATGGGCCGATTTTCCCTCCGCCGGGAAAGTCGGCTTTTTGTTATAATGAATGAAAAACG
ATAGAAAGGGTTGCGCCGCG

Downstream 100 bases:

>100_bases
CCGCTGATACGCCATCTCGTCATGTCGCCGAAAACAGGCGGCATTTTTTGTGCACCTTGTCCATTTACGAATGTTCGTAT
TTTTCTATACACTATTACTA

Product: leucine-rich protein transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MLKELESLYEGDIVINGQPEHPEAYEWFYTADGDEIGIAKQRLTKREQRLLALFLTPTEHRRERESEEERVWKRWMENGD
PSAPAMLTTPYCRLIHFTVNQPITNKTEFAETIHNLFESPITIVWDKDKNGLIIEAKQKRTAELPLLAEMADALAADFYT
TIHLFIGPVRPVDDRLHESFLLEKECFSAARRFWPKQTVYEWEDAIPLPLLSAESDDKTDRILSFLDQFDEDEIRAMETF
LQCNLNVSMAAKKLYMHRNSLQYRIDKWTEQTGIDIKRFKGAVAIYLAILHRRLT

Sequences:

>Translated_295_residues
MLKELESLYEGDIVINGQPEHPEAYEWFYTADGDEIGIAKQRLTKREQRLLALFLTPTEHRRERESEEERVWKRWMENGD
PSAPAMLTTPYCRLIHFTVNQPITNKTEFAETIHNLFESPITIVWDKDKNGLIIEAKQKRTAELPLLAEMADALAADFYT
TIHLFIGPVRPVDDRLHESFLLEKECFSAARRFWPKQTVYEWEDAIPLPLLSAESDDKTDRILSFLDQFDEDEIRAMETF
LQCNLNVSMAAKKLYMHRNSLQYRIDKWTEQTGIDIKRFKGAVAIYLAILHRRLT
>Mature_295_residues
MLKELESLYEGDIVINGQPEHPEAYEWFYTADGDEIGIAKQRLTKREQRLLALFLTPTEHRRERESEEERVWKRWMENGD
PSAPAMLTTPYCRLIHFTVNQPITNKTEFAETIHNLFESPITIVWDKDKNGLIIEAKQKRTAELPLLAEMADALAADFYT
TIHLFIGPVRPVDDRLHESFLLEKECFSAARRFWPKQTVYEWEDAIPLPLLSAESDDKTDRILSFLDQFDEDEIRAMETF
LQCNLNVSMAAKKLYMHRNSLQYRIDKWTEQTGIDIKRFKGAVAIYLAILHRRLT

Specific function: Seems To Regulate The Expression Of The Operons For The Enzymes Involved In D-Galactarate, D-Glucarate And D-Glycerate Utilization. [C]

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34581; Mature: 34581

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKELESLYEGDIVINGQPEHPEAYEWFYTADGDEIGIAKQRLTKREQRLLALFLTPTEH
CHHHHHHHHCCCEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHEEEEECCCHH
RRERESEEERVWKRWMENGDPSAPAMLTTPYCRLIHFTVNQPITNKTEFAETIHNLFESP
HHHHCHHHHHHHHHHHHCCCCCCCEEEECCHHEEEEEECCCCCCCHHHHHHHHHHHHCCC
ITIVWDKDKNGLIIEAKQKRTAELPLLAEMADALAADFYTTIHLFIGPVRPVDDRLHESF
EEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LLEKECFSAARRFWPKQTVYEWEDAIPLPLLSAESDDKTDRILSFLDQFDEDEIRAMETF
HHHHHHHHHHHHCCCCCCHHHHCCCCCCCEECCCCCCHHHHHHHHHHHCCHHHHHHHHHH
LQCNLNVSMAAKKLYMHRNSLQYRIDKWTEQTGIDIKRFKGAVAIYLAILHRRLT
HHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKELESLYEGDIVINGQPEHPEAYEWFYTADGDEIGIAKQRLTKREQRLLALFLTPTEH
CHHHHHHHHCCCEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHEEEEECCCHH
RRERESEEERVWKRWMENGDPSAPAMLTTPYCRLIHFTVNQPITNKTEFAETIHNLFESP
HHHHCHHHHHHHHHHHHCCCCCCCEEEECCHHEEEEEECCCCCCCHHHHHHHHHHHHCCC
ITIVWDKDKNGLIIEAKQKRTAELPLLAEMADALAADFYTTIHLFIGPVRPVDDRLHESF
EEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LLEKECFSAARRFWPKQTVYEWEDAIPLPLLSAESDDKTDRILSFLDQFDEDEIRAMETF
HHHHHHHHHHHHCCCCCCHHHHCCCCCCCEECCCCCCHHHHHHHHHHHCCHHHHHHHHHH
LQCNLNVSMAAKKLYMHRNSLQYRIDKWTEQTGIDIKRFKGAVAIYLAILHRRLT
HHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]