Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
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Accession | NC_009328 |
Length | 3,550,319 |
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The map label for this gene is sasP-1 [H]
Identifier: 138894215
GI number: 138894215
Start: 603590
End: 603802
Strand: Reverse
Name: sasP-1 [H]
Synonym: GTNG_0541
Alternate gene names: 138894215
Gene position: 603802-603590 (Counterclockwise)
Preceding gene: 138894217
Following gene: 138894205
Centisome position: 17.01
GC content: 49.3
Gene sequence:
>213_bases ATGGCACGCAACAATAACAATAACCAACTGTTAGTCGCTGGCGCCCAACAAGCCATCGACCAAATGAAATTCGAGATCGC TCAAGAGTTTGGTGTCAACCTTGGCGCTGATACGACTTCCCGTGCAAACGGTTCGGTCGGCGGCGAAATTACGAAACGCC TTGTAGCAATGGCTCAACAACAACTCGGTGGCCAATTCGGTAACGTTCAATAA
Upstream 100 bases:
>100_bases TTGGGTTCAGCCAAGCTTGGCAGCACGCCTTACGGCGTGTAGTGCTGGTGCAAATCCAGCCAACCCAGCCATTAAAATTT ACAAGAGGAGATGATCAGTT
Downstream 100 bases:
>100_bases TCATTTCACAGACAACTTCATAATAGATGGCAAAAGCCCCAGGCAGTTAGCCTGGGGCTCTTTCATCTCACTGTCACATG CCTCCCGCCTGCCCGGCGAG
Product: small acid-soluble spore protein 1
Products: NA
Alternate protein names: SASP [H]
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MARNNNNNQLLVAGAQQAIDQMKFEIAQEFGVNLGADTTSRANGSVGGEITKRLVAMAQQQLGGQFGNVQ
Sequences:
>Translated_70_residues MARNNNNNQLLVAGAQQAIDQMKFEIAQEFGVNLGADTTSRANGSVGGEITKRLVAMAQQQLGGQFGNVQ >Mature_69_residues ARNNNNNQLLVAGAQQAIDQMKFEIAQEFGVNLGADTTSRANGSVGGEITKRLVAMAQQQLGGQFGNVQ
Specific function: SASP are bound to spore DNA. They are double-stranded DNA-binding proteins that cause DNA to change to an a-like conformation. They protect the DNA backbone from chemical and enzymatic cleavage and are thus involved in dormant spore's high resistance to U
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha/beta-type SASP family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001448 - InterPro: IPR018126 [H]
Pfam domain/function: PF00269 SASP [H]
EC number: NA
Molecular weight: Translated: 7421; Mature: 7290
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS00304 SASP_1 ; PS00684 SASP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARNNNNNQLLVAGAQQAIDQMKFEIAQEFGVNLGADTTSRANGSVGGEITKRLVAMAQQ CCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH QLGGQFGNVQ HHCCCCCCCC >Mature Secondary Structure ARNNNNNQLLVAGAQQAIDQMKFEIAQEFGVNLGADTTSRANGSVGGEITKRLVAMAQQ CCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH QLGGQFGNVQ HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3087949 [H]