| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is sugE [H]
Identifier: 138894195
GI number: 138894195
Start: 583808
End: 584128
Strand: Direct
Name: sugE [H]
Synonym: GTNG_0521
Alternate gene names: 138894195
Gene position: 583808-584128 (Clockwise)
Preceding gene: 138894194
Following gene: 138894196
Centisome position: 16.44
GC content: 50.47
Gene sequence:
>321_bases GTGGCGTGGGTATACCTAGTTGTCGCCGGGATATTCGAAGTCGTCTGGGCCATTTCGCTGAAATATACGGATGGGTTCAC CCGCCTGTGGCCGTCTGTCATGACCGTTGCCGGGATGGCAGCCAGCTTTTATTTTTTATCGATGGCGATAAAAACGTTGC CGATTGGCACCGCCTACGCGGTATGGACAGGAATCGGGGCGTTTGGGGCGGTTGTCATTGGCATGCTATTTTTAAATGAG CCGGTTAATGCGCCGCGGATCGTCTTTTTATTATTCATTCTCGTCGGAATCATCGGTTTAAAGTTTACTGCTGGTCAGTA A
Upstream 100 bases:
>100_bases GCGCGGCATTCTCGCGTACACGGAGGGACAAAAGCCCGGGAGGAATATCATGTTGATATTTCTCACGGCTTTTTTTATTT TTCAAAAGGAGGAATGAAAC
Downstream 100 bases:
>100_bases AAAGGTGGAAGGATCAAGAGATGATCAGCCGGTTTCGAAAACAAGAATCCATTCCCACTTTCCGTTTGGCGTGGAAAAGA TTGATTTTTTGTTGTCATTG
Product: molecular chaperone
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MAWVYLVVAGIFEVVWAISLKYTDGFTRLWPSVMTVAGMAASFYFLSMAIKTLPIGTAYAVWTGIGAFGAVVIGMLFLNE PVNAPRIVFLLFILVGIIGLKFTAGQ
Sequences:
>Translated_106_residues MAWVYLVVAGIFEVVWAISLKYTDGFTRLWPSVMTVAGMAASFYFLSMAIKTLPIGTAYAVWTGIGAFGAVVIGMLFLNE PVNAPRIVFLLFILVGIIGLKFTAGQ >Mature_105_residues AWVYLVVAGIFEVVWAISLKYTDGFTRLWPSVMTVAGMAASFYFLSMAIKTLPIGTAYAVWTGIGAFGAVVIGMLFLNEP VNAPRIVFLLFILVGIIGLKFTAGQ
Specific function: Quaternary ammonium compound efflux pump. Confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations [H]
COG id: COG2076
COG function: function code P; Membrane transporters of cations and cationic drugs
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small multidrug resistance (SMR) protein family. SugE (TC 2.A.7.1.4) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082378, Length=103, Percent_Identity=56.3106796116505, Blast_Score=119, Evalue=5e-29, Organism=Escherichia coli, GI1786755, Length=96, Percent_Identity=34.375, Blast_Score=66, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000390 [H]
Pfam domain/function: PF00893 Multi_Drug_Res [H]
EC number: NA
Molecular weight: Translated: 11484; Mature: 11353
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWVYLVVAGIFEVVWAISLKYTDGFTRLWPSVMTVAGMAASFYFLSMAIKTLPIGTAYA CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VWTGIGAFGAVVIGMLFLNEPVNAPRIVFLLFILVGIIGLKFTAGQ HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AWVYLVVAGIFEVVWAISLKYTDGFTRLWPSVMTVAGMAASFYFLSMAIKTLPIGTAYA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VWTGIGAFGAVVIGMLFLNEPVNAPRIVFLLFILVGIIGLKFTAGQ HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA