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The map label for this gene is ythB [H]

Identifier: 138894193

GI number: 138894193

Start: 582036

End: 583064

Strand: Direct

Name: ythB [H]

Synonym: GTNG_0519

Alternate gene names: 138894193

Gene position: 582036-583064 (Clockwise)

Preceding gene: 138894192

Following gene: 138894194

Centisome position: 16.39

GC content: 46.06

Gene sequence:

>1029_bases
ATGACGCTCGAAGTCATCGGCATCTCGGTACTATGGCTGTTTTTGTTTGGCTACATTATTGTTGCCTCGATTGATTTCGG
AGCCGGGTTTTTCAGCGTTTATAGCCATTGGGCAAACCAACAGCATATTTTGCATCGCATCATTCAGCGTTATCTTTCCC
CTGTATGGGAAGTGACGAACGTCTTTCTCGTCTTTTTCTTTGTTGGCATTGTCGGCTTTTTTCCAAAAACAGCGTATTAT
TACGGATCGATTTTGCTTGTTCCTGCAAGCATTGCCATTGTTTTGTTAGCCATCCGCGGCTCGTACTATGCGTTTCATAC
GTACGGGGAGACAGAGCGAAATTGGTATTTGCTCGCTTATGGATTGACGGGTTTGTTTATTCCCGCCTCGCTGTCAATCG
TGTTGACGATTTCCGAAGGCGGATTTGTAGAAGAAAGCGCGGCGGGTGTTGCGCTTGACTATGGGAAGCTGTTTGCGAGC
CCGTTGTCATGGAGTGTTGTGTTGTTAAGTGTGACGAGCGTTCTTTATATTTCTGCTGTTTTTTTGACGTATTATGCGGA
CGCGGCTGGGGATGAACAAGCGCGGGCGCTGTTACGCCGCTACGCCCTTCTTTGGAGCGGGCCAACGATGTTGTCAGCGC
TGCTCATTATATACCAGCTCCGCTACCATAATCCTGAGCATTATGACAATCTATGGAATGTAGCATGGATGTTGGTTATT
TCCTTTTTGTTTTTCGTCATCACAGTTTGGCTGCTTGGACGGCAGCGGCGATTCGGATGGGCGTTTATTGCGCTTTTGTT
TCAATATGCGTTCGCCTTTTACGCCTATGGCATTTCGCATTATCCGTATTTGCTATATCCCTATTTGACGATTTATGACG
GGTTTACGAATGAAACGATGGCCATGGCGTTGATCGTCGCGTTTATTGCAGGCTTACTGTTGTTAATTCCGTCGCTTTAT
TTACTTATGCGTCTCTTTTTGTTTAACAAAGCGTACGTCAAAGGAAAATGGGAAGGAGGAAAAGGGTGA

Upstream 100 bases:

>100_bases
TGTTGGTCATTGCAAGTGCAACAGTGCTCATTCGCATGTTCCGCCGCAACCCGGTCGAACGGGAGCTGGAAGAACGCGCG
AATAGGGGGGAGGTGGCGCC

Downstream 100 bases:

>100_bases
TGCAAACATTTTTGATCATGTATGCGCCGATGGTTGTCGTCGCACTGTCGGTCGTTGCTGCGTTTTGGGTTGGCTTGAAA
GATGTACACGTGAATGAGTA

Product: bd-type quinol oxidase subunit II

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MTLEVIGISVLWLFLFGYIIVASIDFGAGFFSVYSHWANQQHILHRIIQRYLSPVWEVTNVFLVFFFVGIVGFFPKTAYY
YGSILLVPASIAIVLLAIRGSYYAFHTYGETERNWYLLAYGLTGLFIPASLSIVLTISEGGFVEESAAGVALDYGKLFAS
PLSWSVVLLSVTSVLYISAVFLTYYADAAGDEQARALLRRYALLWSGPTMLSALLIIYQLRYHNPEHYDNLWNVAWMLVI
SFLFFVITVWLLGRQRRFGWAFIALLFQYAFAFYAYGISHYPYLLYPYLTIYDGFTNETMAMALIVAFIAGLLLLIPSLY
LLMRLFLFNKAYVKGKWEGGKG

Sequences:

>Translated_342_residues
MTLEVIGISVLWLFLFGYIIVASIDFGAGFFSVYSHWANQQHILHRIIQRYLSPVWEVTNVFLVFFFVGIVGFFPKTAYY
YGSILLVPASIAIVLLAIRGSYYAFHTYGETERNWYLLAYGLTGLFIPASLSIVLTISEGGFVEESAAGVALDYGKLFAS
PLSWSVVLLSVTSVLYISAVFLTYYADAAGDEQARALLRRYALLWSGPTMLSALLIIYQLRYHNPEHYDNLWNVAWMLVI
SFLFFVITVWLLGRQRRFGWAFIALLFQYAFAFYAYGISHYPYLLYPYLTIYDGFTNETMAMALIVAFIAGLLLLIPSLY
LLMRLFLFNKAYVKGKWEGGKG
>Mature_341_residues
TLEVIGISVLWLFLFGYIIVASIDFGAGFFSVYSHWANQQHILHRIIQRYLSPVWEVTNVFLVFFFVGIVGFFPKTAYYY
GSILLVPASIAIVLLAIRGSYYAFHTYGETERNWYLLAYGLTGLFIPASLSIVLTISEGGFVEESAAGVALDYGKLFASP
LSWSVVLLSVTSVLYISAVFLTYYADAAGDEQARALLRRYALLWSGPTMLSALLIIYQLRYHNPEHYDNLWNVAWMLVIS
FLFFVITVWLLGRQRRFGWAFIALLFQYAFAFYAYGISHYPYLLYPYLTIYDGFTNETMAMALIVAFIAGLLLLIPSLYL
LMRLFLFNKAYVKGKWEGGKG

Specific function: Unknown

COG id: COG1294

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003317 [H]

Pfam domain/function: PF02322 Cyto_ox_2 [H]

EC number: NA

Molecular weight: Translated: 38966; Mature: 38835

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLEVIGISVLWLFLFGYIIVASIDFGAGFFSVYSHWANQQHILHRIIQRYLSPVWEVTN
CEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
VFLVFFFVGIVGFFPKTAYYYGSILLVPASIAIVLLAIRGSYYAFHTYGETERNWYLLAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEEEE
GLTGLFIPASLSIVLTISEGGFVEESAAGVALDYGKLFASPLSWSVVLLSVTSVLYISAV
CHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEHHHHHCCCHHHHHHHHHHHHHHHHHHH
FLTYYADAAGDEQARALLRRYALLWSGPTMLSALLIIYQLRYHNPEHYDNLWNVAWMLVI
HHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SFLFFVITVWLLGRQRRFGWAFIALLFQYAFAFYAYGISHYPYLLYPYLTIYDGFTNETM
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHH
AMALIVAFIAGLLLLIPSLYLLMRLFLFNKAYVKGKWEGGKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCC
>Mature Secondary Structure 
TLEVIGISVLWLFLFGYIIVASIDFGAGFFSVYSHWANQQHILHRIIQRYLSPVWEVTN
EEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
VFLVFFFVGIVGFFPKTAYYYGSILLVPASIAIVLLAIRGSYYAFHTYGETERNWYLLAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEEEE
GLTGLFIPASLSIVLTISEGGFVEESAAGVALDYGKLFASPLSWSVVLLSVTSVLYISAV
CHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEHHHHHCCCHHHHHHHHHHHHHHHHHHH
FLTYYADAAGDEQARALLRRYALLWSGPTMLSALLIIYQLRYHNPEHYDNLWNVAWMLVI
HHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SFLFFVITVWLLGRQRRFGWAFIALLFQYAFAFYAYGISHYPYLLYPYLTIYDGFTNETM
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHH
AMALIVAFIAGLLLLIPSLYLLMRLFLFNKAYVKGKWEGGKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]