The gene/protein map for NC_009328 is currently unavailable.
Definition Geobacillus thermodenitrificans NG80-2 chromosome, complete genome.
Accession NC_009328
Length 3,550,319

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The map label for this gene is ybfM [H]

Identifier: 138894190

GI number: 138894190

Start: 578239

End: 578937

Strand: Reverse

Name: ybfM [H]

Synonym: GTNG_0516

Alternate gene names: 138894190

Gene position: 578937-578239 (Counterclockwise)

Preceding gene: 138894198

Following gene: 138894188

Centisome position: 16.31

GC content: 47.93

Gene sequence:

>699_bases
TTGATACGTTCAATCGTTTGTCATCGTTCCCCGGCTGCCACTCATTTTCATTATAATGGTCATATAAAAATTGCAGCAAA
GCGTGGTGATGATTTGCAACATTATTTGCACCATCTCATCGATCACTTTGGCTATGTCGGCATTATGATCGCGCTTATGC
TTGGCATCGTCGGGCTGCCGATTCCTGACGAACTATTGTTGATCTATACCGGTTACCGCGTCTCCACCGGCGCATTTTCG
TATCCGCTCGCCTTTCTTGTCTGCTTGTTTGGGGCAACTACCGGCATTTCGCTCGGTTACATTCTTGGAATTACGCTCGG
CTTGCCGTTTTTGCATAAATTCGGCCCAAAGCTCCATATAACAGAAAAGCGGCTCCAACAAACGAAAACACTCTTCTCGA
AGCTCGGCCCAGCCGTATTATTCATTTGCTATTTCATCCCGGGCGTTCGGCATCTCGCCGCCTTTTGGGCCGGCGTGAAT
GCTTACGATTGGAGAAAATTTGCCTTGTTCGCCTACAGTGGAGCGGTGGTGTGGGTCGCGGTTTTTTTGACGATCGGCAC
CTATTTCGAAAGCCGCTGGATGGCTTTCAGGCAGTACATCGATGCCTACCGTCCATTTTTATTTTCCGTTTTTCTGGCCG
TTTTCATTTTCACGGTTTTCTACTGGCATGCCCAACAAAAACAAAAACCACCGGATTGA

Upstream 100 bases:

>100_bases
CGTAATCTCAGCAATCGCCCGTTCCAGCTCTTTCAGCTCGTCCTGCCGCATCCTAATCCCCCCTTTTCCCCTTATCACAA
TGTATGAGGAAAAAGGCGTT

Downstream 100 bases:

>100_bases
ACGCCGGTGCTTTTTCTTTCTCTACCCGCACTATACATTTTCGGTCGAATCGCGTTGATACGTTTCTATCAACAAGCCCA
TAAACAAGCCAAATCCAAAC

Product: alkaline phosphatase like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MIRSIVCHRSPAATHFHYNGHIKIAAKRGDDLQHYLHHLIDHFGYVGIMIALMLGIVGLPIPDELLLIYTGYRVSTGAFS
YPLAFLVCLFGATTGISLGYILGITLGLPFLHKFGPKLHITEKRLQQTKTLFSKLGPAVLFICYFIPGVRHLAAFWAGVN
AYDWRKFALFAYSGAVVWVAVFLTIGTYFESRWMAFRQYIDAYRPFLFSVFLAVFIFTVFYWHAQQKQKPPD

Sequences:

>Translated_232_residues
MIRSIVCHRSPAATHFHYNGHIKIAAKRGDDLQHYLHHLIDHFGYVGIMIALMLGIVGLPIPDELLLIYTGYRVSTGAFS
YPLAFLVCLFGATTGISLGYILGITLGLPFLHKFGPKLHITEKRLQQTKTLFSKLGPAVLFICYFIPGVRHLAAFWAGVN
AYDWRKFALFAYSGAVVWVAVFLTIGTYFESRWMAFRQYIDAYRPFLFSVFLAVFIFTVFYWHAQQKQKPPD
>Mature_232_residues
MIRSIVCHRSPAATHFHYNGHIKIAAKRGDDLQHYLHHLIDHFGYVGIMIALMLGIVGLPIPDELLLIYTGYRVSTGAFS
YPLAFLVCLFGATTGISLGYILGITLGLPFLHKFGPKLHITEKRLQQTKTLFSKLGPAVLFICYFIPGVRHLAAFWAGVN
AYDWRKFALFAYSGAVVWVAVFLTIGTYFESRWMAFRQYIDAYRPFLFSVFLAVFIFTVFYWHAQQKQKPPD

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 26448; Mature: 26448

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSIVCHRSPAATHFHYNGHIKIAAKRGDDLQHYLHHLIDHFGYVGIMIALMLGIVGLP
CCCCHHCCCCCCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IPDELLLIYTGYRVSTGAFSYPLAFLVCLFGATTGISLGYILGITLGLPFLHKFGPKLHI
CCCCEEEEEECCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
TEKRLQQTKTLFSKLGPAVLFICYFIPGVRHLAAFWAGVNAYDWRKFALFAYSGAVVWVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
VFLTIGTYFESRWMAFRQYIDAYRPFLFSVFLAVFIFTVFYWHAQQKQKPPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIRSIVCHRSPAATHFHYNGHIKIAAKRGDDLQHYLHHLIDHFGYVGIMIALMLGIVGLP
CCCCHHCCCCCCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IPDELLLIYTGYRVSTGAFSYPLAFLVCLFGATTGISLGYILGITLGLPFLHKFGPKLHI
CCCCEEEEEECCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
TEKRLQQTKTLFSKLGPAVLFICYFIPGVRHLAAFWAGVNAYDWRKFALFAYSGAVVWVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
VFLTIGTYFESRWMAFRQYIDAYRPFLFSVFLAVFIFTVFYWHAQQKQKPPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]