Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
---|---|
Accession | NC_009328 |
Length | 3,550,319 |
Click here to switch to the map view.
The map label for this gene is yueB [H]
Identifier: 138894094
GI number: 138894094
Start: 476735
End: 479515
Strand: Direct
Name: yueB [H]
Synonym: GTNG_0420
Alternate gene names: 138894094
Gene position: 476735-479515 (Clockwise)
Preceding gene: 138894093
Following gene: 138894095
Centisome position: 13.43
GC content: 44.05
Gene sequence:
>2781_bases ATGAATGGAAAATGGAAAATCGCGAAATTGATTGGATTGATCATCTTCATTGTCAGCCTTCCCGTACTGTTTTTTGCTTT CATTGGCCAAAACCCAATGAAACAAACAAACAAGGCGACCAATCATATTGCCGTTGTCAATGAAGATATGGGGGCGAAAT ACGATCAGAAAACCTATTTCTTTGGCAAGGAGATCGTCCCCGCCCTTGCCGACCGTTCAAGTTACCATTGGTCGGTAGTG AACCGCAGTCAGGCGGAGAACGGGTTGAAAAACAATGAATACGATGCAGTCGTGTATTTGCCTTCTGATTTTTCTCGAAA CATTTTATCGTTTAATGACAAGCAACCATTAAAAGCCACAGTGCAATATAAAATCCAGCCGAATTTGGATGCGAAGCATA GGGAACGGGTGCAAAGAGAACTTGAAGCATCCAAAAACATGATCAATCAAAAAATGTCCACCCTCTATTGGAGTTACGTG GCGCAAGAGATAGCGGCGATTCGGAAGAAATTTAACGACATCTTAGAAAAAGAAATCGCGTTCCAGAAGGCGATGTACGC TTTTTATACCCCTAGCTCAGCCAAACTCGCCGAAGAGATTAAAAGGCAAAAAGATATGCTGCAGGAGCTGCTTGAGGCAT CGAACAATGCGAAAGATTCTTCCGCTGGCACTTTGCAAGGAATCGAAGAGGCGGAAGCAGAAATCACCGCTTTTGTTGAC AGCCTGAGCCAATACAGGGAATATCAACAACGGCAAAACGAACTTCTGCAAGAGGGGATTCATGAATACAAAAAGAGATT TAACGAACGAATGGATTTGATGCTCGGGAAGCCATGGGAGGTGAAGCCGGACGTTCGCCATCAAGAGCAAAATTTACTTG AATCAATCACCACTTTGCGAAACACGGTGGCAGAAAGCCACACATCACTAATGACCTTCAATGAGCAGCTGAAACAATCA ACGGTTCAGGAACAATTTGAACAGTTGCTCACATGGAAGAAAGAGTTTGTTCGTCAGTATCAGATAGAAGTCAACAATCA AACGCTCGATCGTTTGCAGCAGTCGCTCATTGAGTTTCGCCAAAAACTGCAATCTCCTTCCCCGGGCCAAACAGACGAAG AGCAACCGGCACCAATTGAAGCGCCACCGCAACCTGCCGATGAGAATTTGTTGGATGCATTGCAGCAACAACTTGCCAAT TTGAAAGCACAATGGCAAGCGTTCAAACCGCAGAGTCCGCAGGAAAGCTGGGAGCATATTGAAGGTTCGATAAGCCAACT TGAGACGGAAATGGAAAAGACGAAACAAGCGTGGCAACAACAACTCGCTTTGCAACAGCAATGGCAGCAAAAATATGCGC AACTCGTCGAACAGCTGAACAAACAATTAACTGAAGGAAAAGCCGATTCGATCGACGATATTGTGCAGCAAATCAAGGAA AAGGAACAGGCGGTTCTCGCGTCGCCGGCGCTGCCAGAAAGCCGCAAACAAGTGTTGTCATCTCATTTTGAAGCGGTGAT TCAAAATCGAAATACAGCCGATCTTCTAGACTATTTTGCATGGTTATCGATTTTCGACGAGGCAGTGCAGCAAACAACTC GTTTTGATGAAGAGTTAGTTGATCAGCTCTTGATGAATTGGAATCAAAGAGATGCTATTTTCCAGATGCTATCGGATGTG CGAGGGTATTTTGAGGAGCTGGAGCAACACTCAGCGTCTTCGCTGAAAGAAGTGGAAGCGGCTGAAGAAAGTACAGAATC ATTTATAGAGACAACGCTTGGGTATATACAGGAATACGATGAAAACGTGCAAAAAATGCAAGAGACGATCACAGGCCAGT TGCAGGAGCTCAGCGATGCGGTGAGCGAAGTGACGATGCAACTGCAAGAGGCGGTAAATGAAGGACAACAAACAGAAGAG ATTTGGAGAGGAAACGATGGGGAATTTGTCATAACGATCCAACAAAACACGATGCAAGATGTACAACAAATTTCCGATCT CATCGCCTCGATTGCCGAAGATCAAGATCACATTGTTGATTATACAAATGAACTGCATGAAAAAATAGATTCAGTTCAAA CGAAAGCAGACGAATTGAATGATAAATGGGCGGCCAATGTGAATACGACAAAGCAAATTCGCAATGACGTATATCGCCTT TTAAACAACACGATGATCGATCAACAGGCCAATGGCTATGTGTACGATTATTTAACAAACCCTGTGCAAGTAAGGGGCGA TTTACCAGAGGAACAAACGACGTATACGCCGCCGGTTGTAGTGTTGATCATTGTTTTGCTGTGCGGCATGCTCATCGGTT TCTTCCTTCATTATTATTCTAATAGCCCATTCATGTTGCAGCTTGCTCTATTGCTCCTGATGAATGTGGTGGTTGGGTTA ATCATCAATATCTATAGCTTGAAAATTTATCCGATGCAAGATGTGCGAGCCATCAAGTGGAGCGTGTTGACGATCGTTTT GTTATTCTTCTGTTCTTCGATGGTTCGATTGGCATTTTTGATCGGACCGTTTACCGGTTGGATTCTTGGAGTCGGGCTTG TACTTTTCTTCATCACTCCATTGCTCGATTTAGTGTTGCCTAACTTCCATTTTGAGCATCCGATTGCAGAAACGTATATA TCGATTCAATACGGAGATCAACAAATCTTTTATTCGACCGTCGTAATGATGGGGGTTCTGTCATTATTGATGGCGGCTGT CCCGTTTTTGAAACATCGCCTTGCCGACCAACAAGAGGAGGGGGAAATGTATGAAGGATAA
Upstream 100 bases:
>100_bases AAGAAATTGAACCGGGATTTGGCTATTTTGTCGTTGGTGGAAAAGACCAAAAAATCCAAATTCCAAAAGTCGAATAAATC AAAGGATCGGGAGAACGGAT
Downstream 100 bases:
>100_bases GGGGCGTTTTTCGTTCCCTTTCCTTCTTGTCCTGTTGTTGTTAATGACAGTGGCGAAGGAGGTAAAGGCGGATGAAGGGC CATCAGTGGAACCAAACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Bacteriophage SPP1 receptor protein yueB [H]
Number of amino acids: Translated: 926; Mature: 926
Protein sequence:
>926_residues MNGKWKIAKLIGLIIFIVSLPVLFFAFIGQNPMKQTNKATNHIAVVNEDMGAKYDQKTYFFGKEIVPALADRSSYHWSVV NRSQAENGLKNNEYDAVVYLPSDFSRNILSFNDKQPLKATVQYKIQPNLDAKHRERVQRELEASKNMINQKMSTLYWSYV AQEIAAIRKKFNDILEKEIAFQKAMYAFYTPSSAKLAEEIKRQKDMLQELLEASNNAKDSSAGTLQGIEEAEAEITAFVD SLSQYREYQQRQNELLQEGIHEYKKRFNERMDLMLGKPWEVKPDVRHQEQNLLESITTLRNTVAESHTSLMTFNEQLKQS TVQEQFEQLLTWKKEFVRQYQIEVNNQTLDRLQQSLIEFRQKLQSPSPGQTDEEQPAPIEAPPQPADENLLDALQQQLAN LKAQWQAFKPQSPQESWEHIEGSISQLETEMEKTKQAWQQQLALQQQWQQKYAQLVEQLNKQLTEGKADSIDDIVQQIKE KEQAVLASPALPESRKQVLSSHFEAVIQNRNTADLLDYFAWLSIFDEAVQQTTRFDEELVDQLLMNWNQRDAIFQMLSDV RGYFEELEQHSASSLKEVEAAEESTESFIETTLGYIQEYDENVQKMQETITGQLQELSDAVSEVTMQLQEAVNEGQQTEE IWRGNDGEFVITIQQNTMQDVQQISDLIASIAEDQDHIVDYTNELHEKIDSVQTKADELNDKWAANVNTTKQIRNDVYRL LNNTMIDQQANGYVYDYLTNPVQVRGDLPEEQTTYTPPVVVLIIVLLCGMLIGFFLHYYSNSPFMLQLALLLLMNVVVGL IINIYSLKIYPMQDVRAIKWSVLTIVLLFFCSSMVRLAFLIGPFTGWILGVGLVLFFITPLLDLVLPNFHFEHPIAETYI SIQYGDQQIFYSTVVMMGVLSLLMAAVPFLKHRLADQQEEGEMYEG
Sequences:
>Translated_926_residues MNGKWKIAKLIGLIIFIVSLPVLFFAFIGQNPMKQTNKATNHIAVVNEDMGAKYDQKTYFFGKEIVPALADRSSYHWSVV NRSQAENGLKNNEYDAVVYLPSDFSRNILSFNDKQPLKATVQYKIQPNLDAKHRERVQRELEASKNMINQKMSTLYWSYV AQEIAAIRKKFNDILEKEIAFQKAMYAFYTPSSAKLAEEIKRQKDMLQELLEASNNAKDSSAGTLQGIEEAEAEITAFVD SLSQYREYQQRQNELLQEGIHEYKKRFNERMDLMLGKPWEVKPDVRHQEQNLLESITTLRNTVAESHTSLMTFNEQLKQS TVQEQFEQLLTWKKEFVRQYQIEVNNQTLDRLQQSLIEFRQKLQSPSPGQTDEEQPAPIEAPPQPADENLLDALQQQLAN LKAQWQAFKPQSPQESWEHIEGSISQLETEMEKTKQAWQQQLALQQQWQQKYAQLVEQLNKQLTEGKADSIDDIVQQIKE KEQAVLASPALPESRKQVLSSHFEAVIQNRNTADLLDYFAWLSIFDEAVQQTTRFDEELVDQLLMNWNQRDAIFQMLSDV RGYFEELEQHSASSLKEVEAAEESTESFIETTLGYIQEYDENVQKMQETITGQLQELSDAVSEVTMQLQEAVNEGQQTEE IWRGNDGEFVITIQQNTMQDVQQISDLIASIAEDQDHIVDYTNELHEKIDSVQTKADELNDKWAANVNTTKQIRNDVYRL LNNTMIDQQANGYVYDYLTNPVQVRGDLPEEQTTYTPPVVVLIIVLLCGMLIGFFLHYYSNSPFMLQLALLLLMNVVVGL IINIYSLKIYPMQDVRAIKWSVLTIVLLFFCSSMVRLAFLIGPFTGWILGVGLVLFFITPLLDLVLPNFHFEHPIAETYI SIQYGDQQIFYSTVVMMGVLSLLMAAVPFLKHRLADQQEEGEMYEG >Mature_926_residues MNGKWKIAKLIGLIIFIVSLPVLFFAFIGQNPMKQTNKATNHIAVVNEDMGAKYDQKTYFFGKEIVPALADRSSYHWSVV NRSQAENGLKNNEYDAVVYLPSDFSRNILSFNDKQPLKATVQYKIQPNLDAKHRERVQRELEASKNMINQKMSTLYWSYV AQEIAAIRKKFNDILEKEIAFQKAMYAFYTPSSAKLAEEIKRQKDMLQELLEASNNAKDSSAGTLQGIEEAEAEITAFVD SLSQYREYQQRQNELLQEGIHEYKKRFNERMDLMLGKPWEVKPDVRHQEQNLLESITTLRNTVAESHTSLMTFNEQLKQS TVQEQFEQLLTWKKEFVRQYQIEVNNQTLDRLQQSLIEFRQKLQSPSPGQTDEEQPAPIEAPPQPADENLLDALQQQLAN LKAQWQAFKPQSPQESWEHIEGSISQLETEMEKTKQAWQQQLALQQQWQQKYAQLVEQLNKQLTEGKADSIDDIVQQIKE KEQAVLASPALPESRKQVLSSHFEAVIQNRNTADLLDYFAWLSIFDEAVQQTTRFDEELVDQLLMNWNQRDAIFQMLSDV RGYFEELEQHSASSLKEVEAAEESTESFIETTLGYIQEYDENVQKMQETITGQLQELSDAVSEVTMQLQEAVNEGQQTEE IWRGNDGEFVITIQQNTMQDVQQISDLIASIAEDQDHIVDYTNELHEKIDSVQTKADELNDKWAANVNTTKQIRNDVYRL LNNTMIDQQANGYVYDYLTNPVQVRGDLPEEQTTYTPPVVVLIIVLLCGMLIGFFLHYYSNSPFMLQLALLLLMNVVVGL IINIYSLKIYPMQDVRAIKWSVLTIVLLFFCSSMVRLAFLIGPFTGWILGVGLVLFFITPLLDLVLPNFHFEHPIAETYI SIQYGDQQIFYSTVVMMGVLSLLMAAVPFLKHRLADQQEEGEMYEG
Specific function: Bacteriophage SPP1 receptor. Essential for the irreversible adsorption of the bacteriophage [H]
COG id: COG1511
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 106763; Mature: 106763
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGKWKIAKLIGLIIFIVSLPVLFFAFIGQNPMKQTNKATNHIAVVNEDMGAKYDQKTYF CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCCCCCHHHH FGKEIVPALADRSSYHWSVVNRSQAENGLKNNEYDAVVYLPSDFSRNILSFNDKQPLKAT HHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHCCCCCCCCEEH VQYKIQPNLDAKHRERVQRELEASKNMINQKMSTLYWSYVAQEIAAIRKKFNDILEKEIA EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQKAMYAFYTPSSAKLAEEIKRQKDMLQELLEASNNAKDSSAGTLQGIEEAEAEITAFVD HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH SLSQYREYQQRQNELLQEGIHEYKKRFNERMDLMLGKPWEVKPDVRHQEQNLLESITTLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH NTVAESHTSLMTFNEQLKQSTVQEQFEQLLTWKKEFVRQYQIEVNNQTLDRLQQSLIEFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QKLQSPSPGQTDEEQPAPIEAPPQPADENLLDALQQQLANLKAQWQAFKPQSPQESWEHI HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH EGSISQLETEMEKTKQAWQQQLALQQQWQQKYAQLVEQLNKQLTEGKADSIDDIVQQIKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH KEQAVLASPALPESRKQVLSSHFEAVIQNRNTADLLDYFAWLSIFDEAVQQTTRFDEELV HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQLLMNWNQRDAIFQMLSDVRGYFEELEQHSASSLKEVEAAEESTESFIETTLGYIQEYD HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENVQKMQETITGQLQELSDAVSEVTMQLQEAVNEGQQTEEIWRGNDGEFVITIQQNTMQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEECHHHHHH VQQISDLIASIAEDQDHIVDYTNELHEKIDSVQTKADELNDKWAANVNTTKQIRNDVYRL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHH LNNTMIDQQANGYVYDYLTNPVQVRGDLPEEQTTYTPPVVVLIIVLLCGMLIGFFLHYYS HHHHHHCCCCCCEEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC NSPFMLQLALLLLMNVVVGLIINIYSLKIYPMQDVRAIKWSVLTIVLLFFCSSMVRLAFL CCCHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGPFTGWILGVGLVLFFITPLLDLVLPNFHFEHPIAETYISIQYGDQQIFYSTVVMMGVL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEECCHHHHHHHHHHHHHH SLLMAAVPFLKHRLADQQEEGEMYEG HHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNGKWKIAKLIGLIIFIVSLPVLFFAFIGQNPMKQTNKATNHIAVVNEDMGAKYDQKTYF CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCCCCCHHHH FGKEIVPALADRSSYHWSVVNRSQAENGLKNNEYDAVVYLPSDFSRNILSFNDKQPLKAT HHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHCCCCCCCCEEH VQYKIQPNLDAKHRERVQRELEASKNMINQKMSTLYWSYVAQEIAAIRKKFNDILEKEIA EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQKAMYAFYTPSSAKLAEEIKRQKDMLQELLEASNNAKDSSAGTLQGIEEAEAEITAFVD HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH SLSQYREYQQRQNELLQEGIHEYKKRFNERMDLMLGKPWEVKPDVRHQEQNLLESITTLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH NTVAESHTSLMTFNEQLKQSTVQEQFEQLLTWKKEFVRQYQIEVNNQTLDRLQQSLIEFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QKLQSPSPGQTDEEQPAPIEAPPQPADENLLDALQQQLANLKAQWQAFKPQSPQESWEHI HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH EGSISQLETEMEKTKQAWQQQLALQQQWQQKYAQLVEQLNKQLTEGKADSIDDIVQQIKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH KEQAVLASPALPESRKQVLSSHFEAVIQNRNTADLLDYFAWLSIFDEAVQQTTRFDEELV HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQLLMNWNQRDAIFQMLSDVRGYFEELEQHSASSLKEVEAAEESTESFIETTLGYIQEYD HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENVQKMQETITGQLQELSDAVSEVTMQLQEAVNEGQQTEEIWRGNDGEFVITIQQNTMQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEECHHHHHH VQQISDLIASIAEDQDHIVDYTNELHEKIDSVQTKADELNDKWAANVNTTKQIRNDVYRL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHH LNNTMIDQQANGYVYDYLTNPVQVRGDLPEEQTTYTPPVVVLIIVLLCGMLIGFFLHYYS HHHHHHCCCCCCEEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC NSPFMLQLALLLLMNVVVGLIINIYSLKIYPMQDVRAIKWSVLTIVLLFFCSSMVRLAFL CCCHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGPFTGWILGVGLVLFFITPLLDLVLPNFHFEHPIAETYISIQYGDQQIFYSTVVMMGVL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEECCHHHHHHHHHHHHHH SLLMAAVPFLKHRLADQQEEGEMYEG HHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]