Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
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Accession | NC_009328 |
Length | 3,550,319 |
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The map label for this gene is yojG [H]
Identifier: 138894054
GI number: 138894054
Start: 432887
End: 433540
Strand: Reverse
Name: yojG [H]
Synonym: GTNG_0380
Alternate gene names: 138894054
Gene position: 433540-432887 (Counterclockwise)
Preceding gene: 138894055
Following gene: 138894049
Centisome position: 12.21
GC content: 53.98
Gene sequence:
>654_bases ATGAACGAACAACATGTACTCGTTGTCTTTCCCCACCCGGACGATGAAGCGTTCGGCGTCTCGGGAACAATCGCCCAGTA TGTGCAAAGCGGCACACCGGTGACATACGCTTGCTTGACGCTTGGCGAAATGGGAAGAAATATGGGCGTGCCCCCGTTCG CCAATCGTGAAACATTGCCATTGATTCGCAGACAAGAATTAGAGGAAGCATGCCGCGTTCTCGGTATTCACGATTTGCGC TTGCTCGGCTATCGCGACAAAACCGTCGAATTCGAAGATGAAGAAGAACTTGCCGACCGGATTGCAGCCATCGTCTCAGA AACAAACCCGTCGCTTGTCATTACATTTTATCCTGGCTACAGTGTCCACCCCGATCATGATGCATGCGGGGCTGCTGTCA TCCGCGCTTTGAAGCGGTGGCCAAAAGAGCAACGGCCGACCGTTTATTGTGTCGCCTTTTCCAAAAACTGCGAACAAGAC CTCGGTCAGCCGGATATTGTCCACGATGTTAGCTCAGTGATTGATACGAAACTCGCCGCCATTCGCGCTCACCGCTCCCA AACGGAAGGGCTGATGCAGGCAGCCTCTAAGCGCGGCGACGCGCTCGCCTGGCTGAAAACAGAGCGGTTTTGGACGTACC GGTGGGACGATTAA
Upstream 100 bases:
>100_bases AAAGAAGGACAATTGCTGTTAGCAGGACATGATTATGAAGGGAAACTGGCGGTCGCTCTTGAGCTGAGTGACAAGCCATT TGCCTAAGGAGGGGAGTCCG
Downstream 100 bases:
>100_bases CAGAAAGGAGCCGTTGAAAAGGTCGCCTTTTTTCAAGAGAGATAGACATTCTCTTACGGAGATGTTCAACGCTTTATACA GTGCTGAAAAGGGTGCTCCG
Product: LmbE-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MNEQHVLVVFPHPDDEAFGVSGTIAQYVQSGTPVTYACLTLGEMGRNMGVPPFANRETLPLIRRQELEEACRVLGIHDLR LLGYRDKTVEFEDEEELADRIAAIVSETNPSLVITFYPGYSVHPDHDACGAAVIRALKRWPKEQRPTVYCVAFSKNCEQD LGQPDIVHDVSSVIDTKLAAIRAHRSQTEGLMQAASKRGDALAWLKTERFWTYRWDD
Sequences:
>Translated_217_residues MNEQHVLVVFPHPDDEAFGVSGTIAQYVQSGTPVTYACLTLGEMGRNMGVPPFANRETLPLIRRQELEEACRVLGIHDLR LLGYRDKTVEFEDEEELADRIAAIVSETNPSLVITFYPGYSVHPDHDACGAAVIRALKRWPKEQRPTVYCVAFSKNCEQD LGQPDIVHDVSSVIDTKLAAIRAHRSQTEGLMQAASKRGDALAWLKTERFWTYRWDD >Mature_217_residues MNEQHVLVVFPHPDDEAFGVSGTIAQYVQSGTPVTYACLTLGEMGRNMGVPPFANRETLPLIRRQELEEACRVLGIHDLR LLGYRDKTVEFEDEEELADRIAAIVSETNPSLVITFYPGYSVHPDHDACGAAVIRALKRWPKEQRPTVYCVAFSKNCEQD LGQPDIVHDVSSVIDTKLAAIRAHRSQTEGLMQAASKRGDALAWLKTERFWTYRWDD
Specific function: Unknown
COG id: COG2120
COG function: function code S; Uncharacterized proteins, LmbE homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PIGL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003737 [H]
Pfam domain/function: PF02585 PIG-L [H]
EC number: NA
Molecular weight: Translated: 24444; Mature: 24444
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEQHVLVVFPHPDDEAFGVSGTIAQYVQSGTPVTYACLTLGEMGRNMGVPPFANRETLP CCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCH LIRRQELEEACRVLGIHDLRLLGYRDKTVEFEDEEELADRIAAIVSETNPSLVITFYPGY HHHHHHHHHHHHHHCHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC SVHPDHDACGAAVIRALKRWPKEQRPTVYCVAFSKNCEQDLGQPDIVHDVSSVIDTKLAA CCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHH IRAHRSQTEGLMQAASKRGDALAWLKTERFWTYRWDD HHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECCC >Mature Secondary Structure MNEQHVLVVFPHPDDEAFGVSGTIAQYVQSGTPVTYACLTLGEMGRNMGVPPFANRETLP CCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCH LIRRQELEEACRVLGIHDLRLLGYRDKTVEFEDEEELADRIAAIVSETNPSLVITFYPGY HHHHHHHHHHHHHHCHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC SVHPDHDACGAAVIRALKRWPKEQRPTVYCVAFSKNCEQDLGQPDIVHDVSSVIDTKLAA CCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHH IRAHRSQTEGLMQAASKRGDALAWLKTERFWTYRWDD HHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9734814; 9384377 [H]