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The map label for this gene is ydgJ [C]

Identifier: 138894008

GI number: 138894008

Start: 379831

End: 381000

Strand: Reverse

Name: ydgJ [C]

Synonym: GTNG_0334

Alternate gene names: 138894008

Gene position: 381000-379831 (Counterclockwise)

Preceding gene: 138894017

Following gene: 138894007

Centisome position: 10.73

GC content: 57.18

Gene sequence:

>1170_bases
ATGATTTCTTCATCTTTCTATTACCGCGTCGGTATCGCCGGCGCCGGTGCGTTCGCAGAATTTCTCGCCGGTGCGCTCGC
CCCGCTTCCTTCCTTTCATCTTGCCGCTGTCGCTGGGCGGACGGATGCCAAACGCCGACGTGTCCTCGACGCTTATCTTC
GCCGAAAGCCAAAGTCAGATGATGTGCGCGAATATCGTGAAGCAGAAGAACTGATCGCTGACCCGCATGTCGATATTGTT
ATTCTTACCACTCCACCGCACTTGCACGCTCCGCTCGCCAAACAAGCGCTTGAGAAAGGAAAACATGTGCTGCTCGAAAA
GCCTGGCGCCCTTGCTGCCGAGAAGCTCCACGCCAACATGGAACTTGCCAATCGCCGACAACGGGCGCTGGCCGTCAATC
TCGTCTTGCGCTATCACCCGCTTGTGGAGGCCGTCAAACAACTCATCCACCATGCCCTGCTTGGGACTGTAGATTATGCG
AGCCTACACAATGCGGCCCACCGCGTCGCTCAAGGCCATTGGTTTTGGGATGAACGGCAAAGCGGCGGTATTTTCATCGA
GCACGGTGTCCACTTTTTCGAAGTCGGACGCCACTGGTTCGGTGAGGCGGCTGAAGCACGGGGATTCGCCTTAACGAATA
CGGACGGCACACGACCGCGCGTCGGAGCCACTGTCATCCACGAGCAGGGCGGTCGCCACATTCCGGTTCACTATTACCAC
GGCTTTACAATGGACCCAGCCGCCCCAGAATCAACGCATTGGGACATTCATACAACACGAGGGCGCATTACGCTTGACGG
CTGGATTCCGATGCAGCTGTCCGTCTCCGGTCTCGTCTCGGCCGATGAAGCGGCCTGCATTGACAATCTGCTCGATGCCA
TTCCAAAACAACCGTCCGCTAGCGCCATCGAACAAATTGGGCAAGCAGCCAACCGGCTGTTGTCATCAACTGCACCATCA
GACGCCCCGCGTATCCTGTACGAACGCACGGTTGCCCTCTCAGACCGCCACGGCTGGTACGAGGCGAGCGCTCAAGCGCG
CTTTCTTGACTTTTGCCGCTTGATCGAAAATCCAAATGAGCGCGGCCTTGTCACCATGGAAGACGCCATCGCCGACATCG
CTTTAGCTGAATCATGCACCGTCGCAGAAAAACTATCTCCTGCCCGCTAA

Upstream 100 bases:

>100_bases
TGTTTACAAGTTTAAAAACTTGAAATCCCCCCTCTTTCTTTGCGGTATAATGAAGATTAGTAATGATATATATATATGTG
GGGAAGGAGGAGAATACGCC

Downstream 100 bases:

>100_bases
GCACGGGCAACAAAACAAGCCTGTTGGGCTGCCGTGAAGGCAGCTGTCAACAGGCTTGTTCGTTTTCATTTCCCCATTAA
GCTACCCGACATTTGCCTTC

Product: dehydrogenases and related proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MISSSFYYRVGIAGAGAFAEFLAGALAPLPSFHLAAVAGRTDAKRRRVLDAYLRRKPKSDDVREYREAEELIADPHVDIV
ILTTPPHLHAPLAKQALEKGKHVLLEKPGALAAEKLHANMELANRRQRALAVNLVLRYHPLVEAVKQLIHHALLGTVDYA
SLHNAAHRVAQGHWFWDERQSGGIFIEHGVHFFEVGRHWFGEAAEARGFALTNTDGTRPRVGATVIHEQGGRHIPVHYYH
GFTMDPAAPESTHWDIHTTRGRITLDGWIPMQLSVSGLVSADEAACIDNLLDAIPKQPSASAIEQIGQAANRLLSSTAPS
DAPRILYERTVALSDRHGWYEASAQARFLDFCRLIENPNERGLVTMEDAIADIALAESCTVAEKLSPAR

Sequences:

>Translated_389_residues
MISSSFYYRVGIAGAGAFAEFLAGALAPLPSFHLAAVAGRTDAKRRRVLDAYLRRKPKSDDVREYREAEELIADPHVDIV
ILTTPPHLHAPLAKQALEKGKHVLLEKPGALAAEKLHANMELANRRQRALAVNLVLRYHPLVEAVKQLIHHALLGTVDYA
SLHNAAHRVAQGHWFWDERQSGGIFIEHGVHFFEVGRHWFGEAAEARGFALTNTDGTRPRVGATVIHEQGGRHIPVHYYH
GFTMDPAAPESTHWDIHTTRGRITLDGWIPMQLSVSGLVSADEAACIDNLLDAIPKQPSASAIEQIGQAANRLLSSTAPS
DAPRILYERTVALSDRHGWYEASAQARFLDFCRLIENPNERGLVTMEDAIADIALAESCTVAEKLSPAR
>Mature_389_residues
MISSSFYYRVGIAGAGAFAEFLAGALAPLPSFHLAAVAGRTDAKRRRVLDAYLRRKPKSDDVREYREAEELIADPHVDIV
ILTTPPHLHAPLAKQALEKGKHVLLEKPGALAAEKLHANMELANRRQRALAVNLVLRYHPLVEAVKQLIHHALLGTVDYA
SLHNAAHRVAQGHWFWDERQSGGIFIEHGVHFFEVGRHWFGEAAEARGFALTNTDGTRPRVGATVIHEQGGRHIPVHYYH
GFTMDPAAPESTHWDIHTTRGRITLDGWIPMQLSVSGLVSADEAACIDNLLDAIPKQPSASAIEQIGQAANRLLSSTAPS
DAPRILYERTVALSDRHGWYEASAQARFLDFCRLIENPNERGLVTMEDAIADIALAESCTVAEKLSPAR

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=278, Percent_Identity=26.978417266187, Blast_Score=69, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24581117, Length=269, Percent_Identity=27.8810408921933, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42861; Mature: 42861

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISSSFYYRVGIAGAGAFAEFLAGALAPLPSFHLAAVAGRTDAKRRRVLDAYLRRKPKSD
CCCCCEEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
DVREYREAEELIADPHVDIVILTTPPHLHAPLAKQALEKGKHVLLEKPGALAAEKLHANM
HHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
ELANRRQRALAVNLVLRYHPLVEAVKQLIHHALLGTVDYASLHNAAHRVAQGHWFWDERQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC
SGGIFIEHGVHFFEVGRHWFGEAAEARGFALTNTDGTRPRVGATVIHEQGGRHIPVHYYH
CCCEEEECCCHHHHHHHHHHCCHHHCCCEEEECCCCCCCCCCEEEEECCCCCCCEEEEEC
GFTMDPAAPESTHWDIHTTRGRITLDGWIPMQLSVSGLVSADEAACIDNLLDAIPKQPSA
CEEECCCCCCCCCCEEEECCCEEEECCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCH
SAIEQIGQAANRLLSSTAPSDAPRILYERTVALSDRHGWYEASAQARFLDFCRLIENPNE
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHCCCCC
RGLVTMEDAIADIALAESCTVAEKLSPAR
CCEEEHHHHHHHHHHHCCCHHHHHCCCCC
>Mature Secondary Structure
MISSSFYYRVGIAGAGAFAEFLAGALAPLPSFHLAAVAGRTDAKRRRVLDAYLRRKPKSD
CCCCCEEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
DVREYREAEELIADPHVDIVILTTPPHLHAPLAKQALEKGKHVLLEKPGALAAEKLHANM
HHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
ELANRRQRALAVNLVLRYHPLVEAVKQLIHHALLGTVDYASLHNAAHRVAQGHWFWDERQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC
SGGIFIEHGVHFFEVGRHWFGEAAEARGFALTNTDGTRPRVGATVIHEQGGRHIPVHYYH
CCCEEEECCCHHHHHHHHHHCCHHHCCCEEEECCCCCCCCCCEEEEECCCCCCCEEEEEC
GFTMDPAAPESTHWDIHTTRGRITLDGWIPMQLSVSGLVSADEAACIDNLLDAIPKQPSA
CEEECCCCCCCCCCEEEECCCEEEECCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCH
SAIEQIGQAANRLLSSTAPSDAPRILYERTVALSDRHGWYEASAQARFLDFCRLIENPNE
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHCCCCC
RGLVTMEDAIADIALAESCTVAEKLSPAR
CCEEEHHHHHHHHHHHCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]