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The map label for this gene is cstA [H]

Identifier: 138893998

GI number: 138893998

Start: 367615

End: 369231

Strand: Direct

Name: cstA [H]

Synonym: GTNG_0324

Alternate gene names: 138893998

Gene position: 367615-369231 (Clockwise)

Preceding gene: 138893997

Following gene: 138893999

Centisome position: 10.35

GC content: 50.53

Gene sequence:

>1617_bases
ATGAGCGCGGTGACCTTATTGCTGATTTCGGCTATTGCCTTTATTGTTGCTTATTTTACGTATGGCAAGTATCTTGACCG
CAAGCTCGGCGTGGACCCAAACCGGCCGACGCCGGCGGTGGAGATGGCGGACGGGAAGGACTATGTTTCCACTAATCGGC
CCGTTTTGCTTGGTCACCATTTCGCTACGATTGCGGGCGGCGGTCCGATTGTCGGTCCGATTTCCGCGGCGGTATTCGGT
TGGATTCCGGCTGTGTTGTGGATTGTGTTAGGAAGCATTTTCTTTGGCGGGGTGCATGACTATGCCTCGCTGCAAGCATC
GATCCGCCATAAAGCGCAGTCGATCGGCACGGTCATTAAAGAGTATATCGGCAAGCGCGGCCAAACATTGTTTTTATCGT
TCTCTATCGCGACCATTATTCTTATTGTTGGCGTGTTTATCGTGTTGGTTGCCGATACGTTTGCTAACGTTCCGGCGGCA
GCGACTGCTTCCATATTGTTTATTTTCGTGGCGATGTTGTTCGGCTTTTTCGTCAACCAAATGCGCGTCAATTTTGTGTT
GGCGAGCATCATCGGCGTCATTGTCATGTTTGCTTGCGTTTGGATCGGCATCGTGTTCCCGATTAAAATGAGCGCGACGT
TTTGGGTGTTTTTCTTGATCATTTATTCTTATGTAGCCTCCGTGTTGCCGGTTTGGTTGCTTTTGCAGCCGCGCGATTAT
TTGAACTCGTATTTGTTGTACGGTATGATGCTCGGTGGGTTTATCGGCATTCTTTTTGCGAATCCGACGCTTCAACTCGC
CGGCTTCACCGGCTTTTACAATGAAAATTTAGGTCCGTTGTTCCCGATTCTCTTTATTACGATTGCCTGTGGCGCGATTT
CTGGTTTCCATTCCTTGGTGGCGAGCGGCACGACAGCCAAACAGTTGGACAACGAACGAAGCGGCCGTTTCATCGCCTAC
GGTGGGATGCTGATTGAAGGGTTTTTGGCGGTGATTGTTGTCTGCTCGGTAGCGTATTTGACGACGGAGCAGTTCACGCA
GCGACTCGCTGAGTTAGGCGGGCCGATCCCCGCTTTCTCTGCTGGTCTCGGGTATTTTATGAGCCATTTTGGCATTCCGG
AAACGGTAGGCACAACCTTTGTTGCTCTGGCTGCCTCGGCTTTTCTCATGACAACGTTAGATTCAGCGACACGGCTCGGG
AGATACGGTGTGCAAGAGTTTGCGGAAGGAAGATCCAAGACGTTTGCCAATCCTCATGTAGCAACAGGAGTGATCGTCGT
CGGTGCGGCGGCGCTGGCGCTCTCGGGAACGTGGAGCGATTTATGGCCGCTATTCGGTTCTGCCAACCAAATGCTTGGCG
CGTTGGCGTTGTTGGCCGTCAGCGTCTGGCTTGTTAAAAGAGGGACGAAGTCGTGGTTTGCGATCATCCCGATGATATTT
ATGTTTATTGTGACGCTTTCCGCGTTGCTTGTCTTCATGAGAACGAATTTCTTGAGCGGCAATATCTTCCTTGTGGTTTG
TGGGTTTATCTTGTTTGTCTTGTGTATCTTCCTCGTCCTTGAAGCGTATCGTTCCTTTACAAAACCGAAAGATAAAGATA
CGACGGTCAAAGCGTAA

Upstream 100 bases:

>100_bases
CCGTCCTCCATCCTACTCAAAAAACCGTTCATATCCACCCGAAGGGAAGGTCGTTCGTCAAGTCGATCGAAACTCTAATG
AGGGAGGATAAAATTAGCCT

Downstream 100 bases:

>100_bases
TAGGTTAAGGCGATACTAGAGTTGCTGAACATCCCCTTTTGGTAGACTTCTGTCTATTGAAAGGGGATTTTGTTATGCAT
GACAGTATTTTTTACATTCT

Product: carbon starvation-induced protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 537

Protein sequence:

>538_residues
MSAVTLLLISAIAFIVAYFTYGKYLDRKLGVDPNRPTPAVEMADGKDYVSTNRPVLLGHHFATIAGGGPIVGPISAAVFG
WIPAVLWIVLGSIFFGGVHDYASLQASIRHKAQSIGTVIKEYIGKRGQTLFLSFSIATIILIVGVFIVLVADTFANVPAA
ATASILFIFVAMLFGFFVNQMRVNFVLASIIGVIVMFACVWIGIVFPIKMSATFWVFFLIIYSYVASVLPVWLLLQPRDY
LNSYLLYGMMLGGFIGILFANPTLQLAGFTGFYNENLGPLFPILFITIACGAISGFHSLVASGTTAKQLDNERSGRFIAY
GGMLIEGFLAVIVVCSVAYLTTEQFTQRLAELGGPIPAFSAGLGYFMSHFGIPETVGTTFVALAASAFLMTTLDSATRLG
RYGVQEFAEGRSKTFANPHVATGVIVVGAAALALSGTWSDLWPLFGSANQMLGALALLAVSVWLVKRGTKSWFAIIPMIF
MFIVTLSALLVFMRTNFLSGNIFLVVCGFILFVLCIFLVLEAYRSFTKPKDKDTTVKA

Sequences:

>Translated_538_residues
MSAVTLLLISAIAFIVAYFTYGKYLDRKLGVDPNRPTPAVEMADGKDYVSTNRPVLLGHHFATIAGGGPIVGPISAAVFG
WIPAVLWIVLGSIFFGGVHDYASLQASIRHKAQSIGTVIKEYIGKRGQTLFLSFSIATIILIVGVFIVLVADTFANVPAA
ATASILFIFVAMLFGFFVNQMRVNFVLASIIGVIVMFACVWIGIVFPIKMSATFWVFFLIIYSYVASVLPVWLLLQPRDY
LNSYLLYGMMLGGFIGILFANPTLQLAGFTGFYNENLGPLFPILFITIACGAISGFHSLVASGTTAKQLDNERSGRFIAY
GGMLIEGFLAVIVVCSVAYLTTEQFTQRLAELGGPIPAFSAGLGYFMSHFGIPETVGTTFVALAASAFLMTTLDSATRLG
RYGVQEFAEGRSKTFANPHVATGVIVVGAAALALSGTWSDLWPLFGSANQMLGALALLAVSVWLVKRGTKSWFAIIPMIF
MFIVTLSALLVFMRTNFLSGNIFLVVCGFILFVLCIFLVLEAYRSFTKPKDKDTTVKA
>Mature_537_residues
SAVTLLLISAIAFIVAYFTYGKYLDRKLGVDPNRPTPAVEMADGKDYVSTNRPVLLGHHFATIAGGGPIVGPISAAVFGW
IPAVLWIVLGSIFFGGVHDYASLQASIRHKAQSIGTVIKEYIGKRGQTLFLSFSIATIILIVGVFIVLVADTFANVPAAA
TASILFIFVAMLFGFFVNQMRVNFVLASIIGVIVMFACVWIGIVFPIKMSATFWVFFLIIYSYVASVLPVWLLLQPRDYL
NSYLLYGMMLGGFIGILFANPTLQLAGFTGFYNENLGPLFPILFITIACGAISGFHSLVASGTTAKQLDNERSGRFIAYG
GMLIEGFLAVIVVCSVAYLTTEQFTQRLAELGGPIPAFSAGLGYFMSHFGIPETVGTTFVALAASAFLMTTLDSATRLGR
YGVQEFAEGRSKTFANPHVATGVIVVGAAALALSGTWSDLWPLFGSANQMLGALALLAVSVWLVKRGTKSWFAIIPMIFM
FIVTLSALLVFMRTNFLSGNIFLVVCGFILFVLCIFLVLEAYRSFTKPKDKDTTVKA

Specific function: Peptide Utilization During Carbon Starvation. [C]

COG id: COG1966

COG function: function code T; Carbon starvation protein, predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CstA family [H]

Homologues:

Organism=Escherichia coli, GI1786814, Length=566, Percent_Identity=33.3922261484099, Blast_Score=269, Evalue=3e-73,
Organism=Escherichia coli, GI87082431, Length=353, Percent_Identity=39.3767705382436, Blast_Score=234, Evalue=2e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003706 [H]

Pfam domain/function: PF02554 CstA [H]

EC number: NA

Molecular weight: Translated: 58157; Mature: 58025

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVTLLLISAIAFIVAYFTYGKYLDRKLGVDPNRPTPAVEMADGKDYVSTNRPVLLGHH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCEEEECH
FATIAGGGPIVGPISAAVFGWIPAVLWIVLGSIFFGGVHDYASLQASIRHKAQSIGTVIK
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
EYIGKRGQTLFLSFSIATIILIVGVFIVLVADTFANVPAAATASILFIFVAMLFGFFVNQ
HHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
MRVNFVLASIIGVIVMFACVWIGIVFPIKMSATFWVFFLIIYSYVASVLPVWLLLQPRDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LNSYLLYGMMLGGFIGILFANPTLQLAGFTGFYNENLGPLFPILFITIACGAISGFHSLV
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ASGTTAKQLDNERSGRFIAYGGMLIEGFLAVIVVCSVAYLTTEQFTQRLAELGGPIPAFS
HCCCHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AGLGYFMSHFGIPETVGTTFVALAASAFLMTTLDSATRLGRYGVQEFAEGRSKTFANPHV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHH
ATGVIVVGAAALALSGTWSDLWPLFGSANQMLGALALLAVSVWLVKRGTKSWFAIIPMIF
HHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
MFIVTLSALLVFMRTNFLSGNIFLVVCGFILFVLCIFLVLEAYRSFTKPKDKDTTVKA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SAVTLLLISAIAFIVAYFTYGKYLDRKLGVDPNRPTPAVEMADGKDYVSTNRPVLLGHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCEEEECH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HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]