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The map label for this gene is yxdM [H]

Identifier: 138893977

GI number: 138893977

Start: 343116

End: 344987

Strand: Direct

Name: yxdM [H]

Synonym: GTNG_0301

Alternate gene names: 138893977

Gene position: 343116-344987 (Clockwise)

Preceding gene: 138893976

Following gene: 138893978

Centisome position: 9.66

GC content: 36.65

Gene sequence:

>1872_bases
ATGACTTTTCCACAGTTCGCTTATAAAAATATTACACGTAATTTAAGGGCGTACATGGCTTTTTATTTAAGCAGCTCGTT
TGCAGTAATGATTTTCTTTATGTTTGCCATGTTTATCTTCCACCCTGCGCTCGAAACAGGTTATATGAACAACATTGCCA
AAAAAGGCATGAAATTTGCGGAGTGGATTATTTTTGGCTTTTCCATTTTCTTTATTCTTTATTCTTTAAGTACTTTTTTA
AAGACACGGAAAAAGGAATTTGGAATTCTCACCATTCATGGAGCATCTCCTAAACAACTTCGATGGCTCATTACATTGGA
GAATGTATTCATTGGTCTTGCTTCCATCATCACAGGTATATTAGGTGGAACGGTGCTTGCTAAATTCTTTTTTATCGCAG
GAGCATATATGGTCAAAATGGAGCCGCTGCAACTCTATTTTCCTTTAGAAGCACTGGGGATAACAGTCGGCGTATTTCTT
CTTCTGTTTATCCTTATTTCACAATTTATGTTATTTACTATTCACTCTGAGGAGGTCATTTCTTTACTAAAGGGGTCAGA
AAAGCCTAAAAAAGAACCGAAGCCATCTATCCTTTTCTCTGTTCTCGGCATCTTATTTTTAGGAACAGGATTTGGCATGT
CTTTATTTGCGGGCATCGATATGGGAAGTGCCGTGGTTATTACTTTGTGTACGGTGATCGGAACGTACTTGTTTTATAGT
CAGTTAAGCGTCTGGATGATACAACTATTGAAAAGAAATAAGAAAATGTATAGAAAAGGGATCAATCTGCTATGGATTTC
AGATTTAACGTACCGCATCAAAGATAACGCTCGTCTATTTTTTATCGTAAGTATTGTTTCGGCTGTAGCTTTTACTGCAA
CCGGTACATTAGCAACATACAAATTGATGTTTTCCACAGCAGAAACATCATATGCAATGGAATTTCTGTCTTATGCAACG
AATCAGGATGAAAAGAAGCAGTTGGAATTTATTAAGGAAAAACTAGAACAAGAAAATATTGATTACCAACAAACCATATT
CAAAGCGATTGAAGCCCGGCAAGGACCAATGAGCTATCCGGTTTTAGTCGTTTCACATCAAGATTGGGTAAAACAATTCC
CTGAGTTACAAGCTCCGAATATTCATGATGGAGAAGGGATATATTATGGGGAGGCAAAACGGGGAGGTTATACCATTGTA
AATGGTAATAAGACGAAATTGCTAACAGACGACCAGCAAATGTCGATTACGTTACAGTCCATTGAAGAGCCGGTATTTTA
CCTTAGCGATATATTGGTTGTAGATCATAACACGTTTAGACAGCTGGAACAGAATCATGAGTTAAGTACGATGTACGGTT
TTCAATTCGAAAATTGGAAAGAAAGTTTGGAAATCAGTCAAGAGATTCAAAGCCAAATCGTAGGTGAAACATTCAATCCT
AATGCCCAGTACTTTTCAAAAGCTGTTCGATATTTTGAGACGGTCCAATTGCCAAGTTTAAGCTTATTTATCGGCTTGTT
TATCGCTATCATTTTCTTCTTGGCGGCTGGGAGCTTCTTGTATTTTAGATTATTTGCTGATCTATACGAGGAAAGAAAAA
AATACAAATCACTTGCAAAGATTGGGTTAAGCGAAAAAGAAATGGTGAAAATCTCGACGATTCAGATGGCCATTCTTTTC
TTCCTTCCCTTCTTGTTAGCGATTATTGAAACAGGTTTCGCTCTACATGTGTTACAGAGGGAAGGTGGATATTTTCATGT
ATTCCAATCAGGCGTTATCACCATTTTAGGGTTTTTGGGCTTGCAAATCATATATTTTATCATTATGAGTCATAGTTACA
ATAAACATTTAAAAGAATACGTATTTCGATAA

Upstream 100 bases:

>100_bases
AAAGATGGTAAATTGTACAACGAAATTTATAGAGGAACGGATCAAAAGGCATTTTTCCAACAGATTATGGATGTTTTATC
AATGTTAGGTGGGGATAGAG

Downstream 100 bases:

>100_bases
TGGACAAATAAGGAGAGGTAGAACATGAAAAAAATCATAGGGATGATCATTGCTCTTGTTGTCGTATTCGTTGGATTTTT
TACGATTGTTCCGGAAGAAG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 623; Mature: 622

Protein sequence:

>623_residues
MTFPQFAYKNITRNLRAYMAFYLSSSFAVMIFFMFAMFIFHPALETGYMNNIAKKGMKFAEWIIFGFSIFFILYSLSTFL
KTRKKEFGILTIHGASPKQLRWLITLENVFIGLASIITGILGGTVLAKFFFIAGAYMVKMEPLQLYFPLEALGITVGVFL
LLFILISQFMLFTIHSEEVISLLKGSEKPKKEPKPSILFSVLGILFLGTGFGMSLFAGIDMGSAVVITLCTVIGTYLFYS
QLSVWMIQLLKRNKKMYRKGINLLWISDLTYRIKDNARLFFIVSIVSAVAFTATGTLATYKLMFSTAETSYAMEFLSYAT
NQDEKKQLEFIKEKLEQENIDYQQTIFKAIEARQGPMSYPVLVVSHQDWVKQFPELQAPNIHDGEGIYYGEAKRGGYTIV
NGNKTKLLTDDQQMSITLQSIEEPVFYLSDILVVDHNTFRQLEQNHELSTMYGFQFENWKESLEISQEIQSQIVGETFNP
NAQYFSKAVRYFETVQLPSLSLFIGLFIAIIFFLAAGSFLYFRLFADLYEERKKYKSLAKIGLSEKEMVKISTIQMAILF
FLPFLLAIIETGFALHVLQREGGYFHVFQSGVITILGFLGLQIIYFIIMSHSYNKHLKEYVFR

Sequences:

>Translated_623_residues
MTFPQFAYKNITRNLRAYMAFYLSSSFAVMIFFMFAMFIFHPALETGYMNNIAKKGMKFAEWIIFGFSIFFILYSLSTFL
KTRKKEFGILTIHGASPKQLRWLITLENVFIGLASIITGILGGTVLAKFFFIAGAYMVKMEPLQLYFPLEALGITVGVFL
LLFILISQFMLFTIHSEEVISLLKGSEKPKKEPKPSILFSVLGILFLGTGFGMSLFAGIDMGSAVVITLCTVIGTYLFYS
QLSVWMIQLLKRNKKMYRKGINLLWISDLTYRIKDNARLFFIVSIVSAVAFTATGTLATYKLMFSTAETSYAMEFLSYAT
NQDEKKQLEFIKEKLEQENIDYQQTIFKAIEARQGPMSYPVLVVSHQDWVKQFPELQAPNIHDGEGIYYGEAKRGGYTIV
NGNKTKLLTDDQQMSITLQSIEEPVFYLSDILVVDHNTFRQLEQNHELSTMYGFQFENWKESLEISQEIQSQIVGETFNP
NAQYFSKAVRYFETVQLPSLSLFIGLFIAIIFFLAAGSFLYFRLFADLYEERKKYKSLAKIGLSEKEMVKISTIQMAILF
FLPFLLAIIETGFALHVLQREGGYFHVFQSGVITILGFLGLQIIYFIIMSHSYNKHLKEYVFR
>Mature_622_residues
TFPQFAYKNITRNLRAYMAFYLSSSFAVMIFFMFAMFIFHPALETGYMNNIAKKGMKFAEWIIFGFSIFFILYSLSTFLK
TRKKEFGILTIHGASPKQLRWLITLENVFIGLASIITGILGGTVLAKFFFIAGAYMVKMEPLQLYFPLEALGITVGVFLL
LFILISQFMLFTIHSEEVISLLKGSEKPKKEPKPSILFSVLGILFLGTGFGMSLFAGIDMGSAVVITLCTVIGTYLFYSQ
LSVWMIQLLKRNKKMYRKGINLLWISDLTYRIKDNARLFFIVSIVSAVAFTATGTLATYKLMFSTAETSYAMEFLSYATN
QDEKKQLEFIKEKLEQENIDYQQTIFKAIEARQGPMSYPVLVVSHQDWVKQFPELQAPNIHDGEGIYYGEAKRGGYTIVN
GNKTKLLTDDQQMSITLQSIEEPVFYLSDILVVDHNTFRQLEQNHELSTMYGFQFENWKESLEISQEIQSQIVGETFNPN
AQYFSKAVRYFETVQLPSLSLFIGLFIAIIFFLAAGSFLYFRLFADLYEERKKYKSLAKIGLSEKEMVKISTIQMAILFF
LPFLLAIIETGFALHVLQREGGYFHVFQSGVITILGFLGLQIIYFIIMSHSYNKHLKEYVFR

Specific function: Part of the ABC transporter complex yxdLM which could be involved in peptide resistance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 71489; Mature: 71358

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFPQFAYKNITRNLRAYMAFYLSSSFAVMIFFMFAMFIFHPALETGYMNNIAKKGMKFA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EWIIFGFSIFFILYSLSTFLKTRKKEFGILTIHGASPKQLRWLITLENVFIGLASIITGI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHEEEEEEHHHHHHHHHHHHHHH
LGGTVLAKFFFIAGAYMVKMEPLQLYFPLEALGITVGVFLLLFILISQFMLFTIHSEEVI
HHHHHHHHHHHHHHHHHEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
SLLKGSEKPKKEPKPSILFSVLGILFLGTGFGMSLFAGIDMGSAVVITLCTVIGTYLFYS
HHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH
QLSVWMIQLLKRNKKMYRKGINLLWISDLTYRIKDNARLFFIVSIVSAVAFTATGTLATY
HHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCEEEHHHHHHHHHHHHHCCHHHHH
KLMFSTAETSYAMEFLSYATNQDEKKQLEFIKEKLEQENIDYQQTIFKAIEARQGPMSYP
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC
VLVVSHQDWVKQFPELQAPNIHDGEGIYYGEAKRGGYTIVNGNKTKLLTDDQQMSITLQS
EEEECCHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCEEEEECCHHHHEEHHH
IEEPVFYLSDILVVDHNTFRQLEQNHELSTMYGFQFENWKESLEISQEIQSQIVGETFNP
HHCHHHHHHHHHEECCHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
NAQYFSKAVRYFETVQLPSLSLFIGLFIAIIFFLAAGSFLYFRLFADLYEERKKYKSLAK
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGLSEKEMVKISTIQMAILFFLPFLLAIIETGFALHVLQREGGYFHVFQSGVITILGFLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCEEEEHHHHHHHHHHHHH
LQIIYFIIMSHSYNKHLKEYVFR
HHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure 
TFPQFAYKNITRNLRAYMAFYLSSSFAVMIFFMFAMFIFHPALETGYMNNIAKKGMKFA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EWIIFGFSIFFILYSLSTFLKTRKKEFGILTIHGASPKQLRWLITLENVFIGLASIITGI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHEEEEEEHHHHHHHHHHHHHHH
LGGTVLAKFFFIAGAYMVKMEPLQLYFPLEALGITVGVFLLLFILISQFMLFTIHSEEVI
HHHHHHHHHHHHHHHHHEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
SLLKGSEKPKKEPKPSILFSVLGILFLGTGFGMSLFAGIDMGSAVVITLCTVIGTYLFYS
HHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH
QLSVWMIQLLKRNKKMYRKGINLLWISDLTYRIKDNARLFFIVSIVSAVAFTATGTLATY
HHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCEEEHHHHHHHHHHHHHCCHHHHH
KLMFSTAETSYAMEFLSYATNQDEKKQLEFIKEKLEQENIDYQQTIFKAIEARQGPMSYP
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC
VLVVSHQDWVKQFPELQAPNIHDGEGIYYGEAKRGGYTIVNGNKTKLLTDDQQMSITLQS
EEEECCHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCEEEEECCHHHHEEHHH
IEEPVFYLSDILVVDHNTFRQLEQNHELSTMYGFQFENWKESLEISQEIQSQIVGETFNP
HHCHHHHHHHHHEECCHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
NAQYFSKAVRYFETVQLPSLSLFIGLFIAIIFFLAAGSFLYFRLFADLYEERKKYKSLAK
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGLSEKEMVKISTIQMAILFFLPFLLAIIETGFALHVLQREGGYFHVFQSGVITILGFLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCEEEEHHHHHHHHHHHHH
LQIIYFIIMSHSYNKHLKEYVFR
HHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377; 7952181 [H]