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The map label for this gene is liaH [H]

Identifier: 138893958

GI number: 138893958

Start: 320212

End: 320865

Strand: Reverse

Name: liaH [H]

Synonym: GTNG_0282

Alternate gene names: 138893958

Gene position: 320865-320212 (Counterclockwise)

Preceding gene: 138893959

Following gene: 138893957

Centisome position: 9.04

GC content: 52.29

Gene sequence:

>654_bases
ATGGGTGTGTTCCGCCGGATCAAAACAATCGTTCTCGCTGAAGTGAACGAACAAATCGATCAATGGGAAGATCCGATTGC
CATGACGAAACAATATTTACGCGAACTCAAACAACAACTCGAACAAGGGCGCCAAGCGCTCGCCCAACAATGGGTCGCCG
AACAGCGTTATGCAACGCTCATCGCGCAAGCGGAAGAAACGGTGGAAAAGCGGAATCGTCAAGCCAAGTTGGCGCTCGAA
CGCAACGAAGAAGCCGTCGCCAAGCTGGCATTGGGCGACAAACTGCTGTATGAGAAGAAACTAGAAACCTACAAGCAACA
ATATGAAACGATCAAAGCAAAAACAGCCGAAATCGTCCGCCGCCTCAATCAGCTGCGCGAACGATATGACGAGCTTGCCG
CCAAACAGCTCGAGCTTACCGCACGCGTCAATGCTGCCAAAGCGTTAAAACAAATCGACACGACACTCGCTTCGTTTTCT
GCTGATGAGGCGCTGCGCGGCTTCGCCCGCATGGAAGAACGTGTCATCGCGTTAGAAGCCGAAGCGTCCGCTGCTCGATT
CGGAACGAACGCTGTGTTGTCCCCTGTGCCGTTTGAGGAAGAAGTGGAACGTGAATTAGCGAAATGGAAGGAAGCCCAAT
CAACGAACGCCTAA

Upstream 100 bases:

>100_bases
AAATCAGTAGCCGCGGAAACATGGAAACCAACAACCGCGCCCATTTCCACCGACTGGCTCGATGAATGGGAAAAAATTGT
ACAAAAGGAGGGCAAAACAA

Downstream 100 bases:

>100_bases
TCTCCCCCTCCCCCCTTTTCACATAGATGACCCCCTTGCCCCACCTGGCAAGGGGGATTGGTTTGTTCCGCTCTAGTTGA
TTTCCCGCCATGGATGAGCA

Product: phage shock protein A-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MGVFRRIKTIVLAEVNEQIDQWEDPIAMTKQYLRELKQQLEQGRQALAQQWVAEQRYATLIAQAEETVEKRNRQAKLALE
RNEEAVAKLALGDKLLYEKKLETYKQQYETIKAKTAEIVRRLNQLRERYDELAAKQLELTARVNAAKALKQIDTTLASFS
ADEALRGFARMEERVIALEAEASAARFGTNAVLSPVPFEEEVERELAKWKEAQSTNA

Sequences:

>Translated_217_residues
MGVFRRIKTIVLAEVNEQIDQWEDPIAMTKQYLRELKQQLEQGRQALAQQWVAEQRYATLIAQAEETVEKRNRQAKLALE
RNEEAVAKLALGDKLLYEKKLETYKQQYETIKAKTAEIVRRLNQLRERYDELAAKQLELTARVNAAKALKQIDTTLASFS
ADEALRGFARMEERVIALEAEASAARFGTNAVLSPVPFEEEVERELAKWKEAQSTNA
>Mature_216_residues
GVFRRIKTIVLAEVNEQIDQWEDPIAMTKQYLRELKQQLEQGRQALAQQWVAEQRYATLIAQAEETVEKRNRQAKLALER
NEEAVAKLALGDKLLYEKKLETYKQQYETIKAKTAEIVRRLNQLRERYDELAAKQLELTARVNAAKALKQIDTTLASFSA
DEALRGFARMEERVIALEAEASAARFGTNAVLSPVPFEEEVERELAKWKEAQSTNA

Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspa Has A Role As A Negative Regulator, Is Required For Efficient Translocation And Has An Unknown Fu

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 24911; Mature: 24779

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVFRRIKTIVLAEVNEQIDQWEDPIAMTKQYLRELKQQLEQGRQALAQQWVAEQRYATL
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAQAEETVEKRNRQAKLALERNEEAVAKLALGDKLLYEKKLETYKQQYETIKAKTAEIVR
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLNQLRERYDELAAKQLELTARVNAAKALKQIDTTLASFSADEALRGFARMEERVIALEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EASAARFGTNAVLSPVPFEEEVERELAKWKEAQSTNA
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GVFRRIKTIVLAEVNEQIDQWEDPIAMTKQYLRELKQQLEQGRQALAQQWVAEQRYATL
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAQAEETVEKRNRQAKLALERNEEAVAKLALGDKLLYEKKLETYKQQYETIKAKTAEIVR
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLNQLRERYDELAAKQLELTARVNAAKALKQIDTTLASFSADEALRGFARMEERVIALEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EASAARFGTNAVLSPVPFEEEVERELAKWKEAQSTNA
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377; 12207695 [H]