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The map label for this gene is yvdD [H]

Identifier: 138893934

GI number: 138893934

Start: 289720

End: 290280

Strand: Direct

Name: yvdD [H]

Synonym: GTNG_0258

Alternate gene names: 138893934

Gene position: 289720-290280 (Clockwise)

Preceding gene: 138893933

Following gene: 138893937

Centisome position: 8.16

GC content: 53.3

Gene sequence:

>561_bases
ATGAAAGCAATTTGTGTATTTTGTGGATCAAGCTATGGACAGAACAGCAAATATAAAGAAGCAGCGCAGGAGCTTGGGAT
GTTTTTAGCTCGCCGCGGCATTACGCTGATTTACGGCGGAGGAAAGGCTGGGCTGATGGGAGAGGTGGCCGAGGCAGTGC
TAGGCCATCAAGGGCATGTCGTCGGGATCATTCCACAGTTTTTGAAAGATCGAGAAGTAGCTCATGATCGGTTGAGCGAG
TTGGTCGTCGTCGATACAATGCATACGCGCAAGGCGAAAATGAACGAAGCAGCCGACGGGTTTATCGCCCTGCCTGGAGG
ATATGGAACGTACGAAGAGCTGTTTGAAGTACTGTCGTGGTCTCGCGTCGGCCTTCACCAAAAACCGATCGGCCTGCTCA
ATGTGGACGGCTTTTTTGACCCGCTCCTCGACTTGCTTCGGCACACGGTTCAACAAGGATTTGCCGCCCCACAAGATCTC
GAGCTGATCGTGAGTGCCGGGGATGTTCCGACGCTATATGAGCGGATGAGCATGTTCCGCCATCGTCGTGGGCAGCGATG
A

Upstream 100 bases:

>100_bases
GTTTTTGGCATTGGAAGGCAACAGCTGCCTTTGTCATGCTTGTATTAAAAAGGGGCGATCGCTTGTCCCGAAAATACGCG
GGTAAAGGTGTGGATATAAA

Downstream 100 bases:

>100_bases
TGGCGGGGTGGTTTGCCGCTAAGTCTTTAAGCCGGCGAATTGTTTACTTCATATGCGGCGCAGATGCCGGATTCAATGGC
TCCTTGAATCCAGCCATGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKAICVFCGSSYGQNSKYKEAAQELGMFLARRGITLIYGGGKAGLMGEVAEAVLGHQGHVVGIIPQFLKDREVAHDRLSE
LVVVDTMHTRKAKMNEAADGFIALPGGYGTYEELFEVLSWSRVGLHQKPIGLLNVDGFFDPLLDLLRHTVQQGFAAPQDL
ELIVSAGDVPTLYERMSMFRHRRGQR

Sequences:

>Translated_186_residues
MKAICVFCGSSYGQNSKYKEAAQELGMFLARRGITLIYGGGKAGLMGEVAEAVLGHQGHVVGIIPQFLKDREVAHDRLSE
LVVVDTMHTRKAKMNEAADGFIALPGGYGTYEELFEVLSWSRVGLHQKPIGLLNVDGFFDPLLDLLRHTVQQGFAAPQDL
ELIVSAGDVPTLYERMSMFRHRRGQR
>Mature_186_residues
MKAICVFCGSSYGQNSKYKEAAQELGMFLARRGITLIYGGGKAGLMGEVAEAVLGHQGHVVGIIPQFLKDREVAHDRLSE
LVVVDTMHTRKAKMNEAADGFIALPGGYGTYEELFEVLSWSRVGLHQKPIGLLNVDGFFDPLLDLLRHTVQQGFAAPQDL
ELIVSAGDVPTLYERMSMFRHRRGQR

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=204, Percent_Identity=38.2352941176471, Blast_Score=157, Evalue=8e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 20549; Mature: 20549

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAICVFCGSSYGQNSKYKEAAQELGMFLARRGITLIYGGGKAGLMGEVAEAVLGHQGHV
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCCE
VGIIPQFLKDREVAHDRLSELVVVDTMHTRKAKMNEAADGFIALPGGYGTYEELFEVLSW
EEHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHH
SRVGLHQKPIGLLNVDGFFDPLLDLLRHTVQQGFAAPQDLELIVSAGDVPTLYERMSMFR
HHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHH
HRRGQR
HHCCCC
>Mature Secondary Structure
MKAICVFCGSSYGQNSKYKEAAQELGMFLARRGITLIYGGGKAGLMGEVAEAVLGHQGHV
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCCE
VGIIPQFLKDREVAHDRLSELVVVDTMHTRKAKMNEAADGFIALPGGYGTYEELFEVLSW
EEHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHH
SRVGLHQKPIGLLNVDGFFDPLLDLLRHTVQQGFAAPQDLELIVSAGDVPTLYERMSMFR
HHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHH
HRRGQR
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]