| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is yebA [H]
Identifier: 138893906
GI number: 138893906
Start: 249996
End: 252158
Strand: Direct
Name: yebA [H]
Synonym: GTNG_0230
Alternate gene names: 138893906
Gene position: 249996-252158 (Clockwise)
Preceding gene: 138893905
Following gene: 138893907
Centisome position: 7.04
GC content: 49.79
Gene sequence:
>2163_bases ATGAAACAAAGGGCGGAGACTATGTTATCCGCCGTGTTACCGAATGGGTTGGCTGCTTGGTTGCTCACGGAATGGCTTTG GCCGCTTGACACAGTTGCGGACACAGCGCATATCGGGACATTCGCGATGTTTGTCGTCATTTGTTTTCTATTTTATACGT TGCGTGTTCCCACCTGGCTTTCTGCCCTCGGTAAAATCGGTTATATATGGTGGGCGCTTGATGAATGGTTTTATGATGAG GCGATATGGGATGTCCCACGCGCATTATGGTGGGACGGCGTTGCTTGGCTTGTCGGGGGAGGAGCATCGATGCCGGACGA TGCGCTGCGCACCCTTGCCTTTTTTGTGTCTTTATGGGCGGCTTCGTTTGTTTGGCACTGGCTGGTTGTGCGGCGAAACC GGTGGTTTGTCCCTTATGCGCTCACGGTTAGCTATATTGCTGTGTTGGATACGTTTTTCCCTTACAGTGGAAACGGAGCG ATTGTTCGCCTTGTGGCGCTCGGTTTTTTCGCATTCGTTTGGCTGCATGGGGAGCGGATGTGGGCAAAAGGAGGGGCTGC TTATATCCGGAAGTGGCGGGCGGCAGCTCTATCTATTCCTGCTATTGCCGTTACGGCCGGATATGTTGGGCCGAAACTGC CGCCGCAATGGCCGGACCCGGTTGCGTTTATTCGTAGCTATGCCGCTGACTCTGGGGAGGAGTTTGACACGACGACAGCA GCTGTTGTCAAGAAAATTGGCTATGGGCAAAATGATTCTCGCCTCGGCGGACCGTTTATCGCTGATGATACGGTTGTGTT CATTGCTAAAGATGAAGACCGTCATTATTGGCGTGTAGAAACGAAAGATGTTTACACTGGAAAGGGATGGGAATCATTCC AGAGTGAACAAGTGAAATCATTCAGAAACGGAAGACTGATGGAGCATGAATGGTGGAGCGACAAAGTAAAAACGGCGGAA CAGACAGCGGAAATCACCCGCCAAGATCAAGCGTTCCATCTCGTTTATCCGATTGGTTTACAACAAGTGCAAACGTCTGA CAACATTGTCTACCGCATGCATATGGCGACAGAAAAAATTTATACGACCGATATAAATGCCAATGCACTTCCCATTCAGC GGTATACGATCACGTATATGGAGCCGGATTTCCCCATCGAGGCATTGCGTTCCGCGGCTCCAGTCCAAGACGCCAGTTTT CTGAAGCGCTATACGCAACTGCCGGATACGCTTCCGAAGCGGGTGCGTGATTTGGCAAAGCAAATTACCGAAGGAAAAGA GACGGTATACGATAAAGTGAAAGCCATTGAACAATATTTCCATATGAACGGGTATGCGTACGAAACGACGAATGTTGCCG TCCCAAGAGCCAATCAAGATTATGTCGATCAATTTTTGTTTGAAACGAAACAAGGGTATTGTGATAATTTTTCCACCTCA ATGGCTGTGCTTGTTCGCAGTCTAGGTATTCCCGCGCGTTGGGTGAAAGGCTATACATCCGGACAGCTTGTCGAGGAGCA AAATGGGGCTGAGCTTTATAAAGTGCGAAACAACGACGCACATTCGTGGGTCGAGGTTTACTTTGAGGGTGTCGGTTGGG TGCCGTTTGAGCCGACACAAGGGTTTGTCAATCCGTATGCCTTTTCGCTTTCCACTTCCAATGAAGAGCAACAAGCGCCG TCGTTGCAACCGGAAGAACAAGAGACACCGCGTGTGTCGATCGAACAATTGATCGAACCATCTTCGCAGAAACAAGATCG TCATTGGTGGAAGCAGTTAGCTAGCGTCTGGTCATGGAAAACGGTGCTGACTGTGTTTGTTGCGTTGGCTGCGTTGGGTG GCGCGCTCTACGTGACAAGACGGAAATGGTGGCCGCGCTGGACGATTTTTTGTTTTCGCTGTCGTCGAGTTGACGGGCCA GAATGGCTTGTTCCTGCTTATTTGGCGTTGCTGCGTCAATTACATGACTACGGGTTGAGACGAAAAGAGGATGAAACGCT GCGCCAGTACGCCATTGAAGTGGATCGTTTATTGGAAACCAATGAAATGGGACGGCTGACAAAATGGTATGAGCAAGTGA TCTACGGCGCAAACAGCGACCGTATCGACATCCGTGAGGCGCGCCAATTGTGGGAAAATTTAATAAAAAGGACAATCACT TGA
Upstream 100 bases:
>100_bases AGCAACAGAGCTGGGCGGACGGGCTCCGCCGCAGCGGGGGGGATGTATTGCACATTGACCCGCAGATGTTGCAAACCATC CGGCAAGGAGGGGAAAACGG
Downstream 100 bases:
>100_bases CCGACTGCTGGCAAGTTGATAGAATGGATTCAAATTTGCATACGAACAGAACGAAAGCCTTTCATATATGCGTGGGAATA TGGCTCACGTGTCTCTACCG
Product: membrane-bound protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 720; Mature: 720
Protein sequence:
>720_residues MKQRAETMLSAVLPNGLAAWLLTEWLWPLDTVADTAHIGTFAMFVVICFLFYTLRVPTWLSALGKIGYIWWALDEWFYDE AIWDVPRALWWDGVAWLVGGGASMPDDALRTLAFFVSLWAASFVWHWLVVRRNRWFVPYALTVSYIAVLDTFFPYSGNGA IVRLVALGFFAFVWLHGERMWAKGGAAYIRKWRAAALSIPAIAVTAGYVGPKLPPQWPDPVAFIRSYAADSGEEFDTTTA AVVKKIGYGQNDSRLGGPFIADDTVVFIAKDEDRHYWRVETKDVYTGKGWESFQSEQVKSFRNGRLMEHEWWSDKVKTAE QTAEITRQDQAFHLVYPIGLQQVQTSDNIVYRMHMATEKIYTTDINANALPIQRYTITYMEPDFPIEALRSAAPVQDASF LKRYTQLPDTLPKRVRDLAKQITEGKETVYDKVKAIEQYFHMNGYAYETTNVAVPRANQDYVDQFLFETKQGYCDNFSTS MAVLVRSLGIPARWVKGYTSGQLVEEQNGAELYKVRNNDAHSWVEVYFEGVGWVPFEPTQGFVNPYAFSLSTSNEEQQAP SLQPEEQETPRVSIEQLIEPSSQKQDRHWWKQLASVWSWKTVLTVFVALAALGGALYVTRRKWWPRWTIFCFRCRRVDGP EWLVPAYLALLRQLHDYGLRRKEDETLRQYAIEVDRLLETNEMGRLTKWYEQVIYGANSDRIDIREARQLWENLIKRTIT
Sequences:
>Translated_720_residues MKQRAETMLSAVLPNGLAAWLLTEWLWPLDTVADTAHIGTFAMFVVICFLFYTLRVPTWLSALGKIGYIWWALDEWFYDE AIWDVPRALWWDGVAWLVGGGASMPDDALRTLAFFVSLWAASFVWHWLVVRRNRWFVPYALTVSYIAVLDTFFPYSGNGA IVRLVALGFFAFVWLHGERMWAKGGAAYIRKWRAAALSIPAIAVTAGYVGPKLPPQWPDPVAFIRSYAADSGEEFDTTTA AVVKKIGYGQNDSRLGGPFIADDTVVFIAKDEDRHYWRVETKDVYTGKGWESFQSEQVKSFRNGRLMEHEWWSDKVKTAE QTAEITRQDQAFHLVYPIGLQQVQTSDNIVYRMHMATEKIYTTDINANALPIQRYTITYMEPDFPIEALRSAAPVQDASF LKRYTQLPDTLPKRVRDLAKQITEGKETVYDKVKAIEQYFHMNGYAYETTNVAVPRANQDYVDQFLFETKQGYCDNFSTS MAVLVRSLGIPARWVKGYTSGQLVEEQNGAELYKVRNNDAHSWVEVYFEGVGWVPFEPTQGFVNPYAFSLSTSNEEQQAP SLQPEEQETPRVSIEQLIEPSSQKQDRHWWKQLASVWSWKTVLTVFVALAALGGALYVTRRKWWPRWTIFCFRCRRVDGP EWLVPAYLALLRQLHDYGLRRKEDETLRQYAIEVDRLLETNEMGRLTKWYEQVIYGANSDRIDIREARQLWENLIKRTIT >Mature_720_residues MKQRAETMLSAVLPNGLAAWLLTEWLWPLDTVADTAHIGTFAMFVVICFLFYTLRVPTWLSALGKIGYIWWALDEWFYDE AIWDVPRALWWDGVAWLVGGGASMPDDALRTLAFFVSLWAASFVWHWLVVRRNRWFVPYALTVSYIAVLDTFFPYSGNGA IVRLVALGFFAFVWLHGERMWAKGGAAYIRKWRAAALSIPAIAVTAGYVGPKLPPQWPDPVAFIRSYAADSGEEFDTTTA AVVKKIGYGQNDSRLGGPFIADDTVVFIAKDEDRHYWRVETKDVYTGKGWESFQSEQVKSFRNGRLMEHEWWSDKVKTAE QTAEITRQDQAFHLVYPIGLQQVQTSDNIVYRMHMATEKIYTTDINANALPIQRYTITYMEPDFPIEALRSAAPVQDASF LKRYTQLPDTLPKRVRDLAKQITEGKETVYDKVKAIEQYFHMNGYAYETTNVAVPRANQDYVDQFLFETKQGYCDNFSTS MAVLVRSLGIPARWVKGYTSGQLVEEQNGAELYKVRNNDAHSWVEVYFEGVGWVPFEPTQGFVNPYAFSLSTSNEEQQAP SLQPEEQETPRVSIEQLIEPSSQKQDRHWWKQLASVWSWKTVLTVFVALAALGGALYVTRRKWWPRWTIFCFRCRRVDGP EWLVPAYLALLRQLHDYGLRRKEDETLRQYAIEVDRLLETNEMGRLTKWYEQVIYGANSDRIDIREARQLWENLIKRTIT
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002931 [H]
Pfam domain/function: PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 83181; Mature: 83181
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRAETMLSAVLPNGLAAWLLTEWLWPLDTVADTAHIGTFAMFVVICFLFYTLRVPTWL CCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SALGKIGYIWWALDEWFYDEAIWDVPRALWWDGVAWLVGGGASMPDDALRTLAFFVSLWA HHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCHHHHHHHHHHHHHHH ASFVWHWLVVRRNRWFVPYALTVSYIAVLDTFFPYSGNGAIVRLVALGFFAFVWLHGERM HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHH WAKGGAAYIRKWRAAALSIPAIAVTAGYVGPKLPPQWPDPVAFIRSYAADSGEEFDTTTA HHCCCHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHH AVVKKIGYGQNDSRLGGPFIADDTVVFIAKDEDRHYWRVETKDVYTGKGWESFQSEQVKS HHHHHHCCCCCCCCCCCCEEECCEEEEEEECCCCCEEEEECCEEECCCCHHHHHHHHHHH FRNGRLMEHEWWSDKVKTAEQTAEITRQDQAFHLVYPIGLQQVQTSDNIVYRMHMATEKI HHCCCCCCCHHCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHCCCCCEEEEEEECCCEE YTTDINANALPIQRYTITYMEPDFPIEALRSAAPVQDASFLKRYTQLPDTLPKRVRDLAK EEECCCCCCEEEEEEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHH QITEGKETVYDKVKAIEQYFHMNGYAYETTNVAVPRANQDYVDQFLFETKQGYCDNFSTS HHHCCHHHHHHHHHHHHHHHHCCCEEEEECCEECCCCCHHHHHHHHHHHCCCCCCCCHHH MAVLVRSLGIPARWVKGYTSGQLVEEQNGAELYKVRNNDAHSWVEVYFEGVGWVPFEPTQ HHHHHHHCCCCHHHHCCCCCCCEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCC GFVNPYAFSLSTSNEEQQAPSLQPEEQETPRVSIEQLIEPSSQKQDRHWWKQLASVWSWK CCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHH TVLTVFVALAALGGALYVTRRKWWPRWTIFCFRCRRVDGPEWLVPAYLALLRQLHDYGLR HHHHHHHHHHHHCCCEEEECCCCCCCHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC RKEDETLRQYAIEVDRLLETNEMGRLTKWYEQVIYGANSDRIDIREARQLWENLIKRTIT CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKQRAETMLSAVLPNGLAAWLLTEWLWPLDTVADTAHIGTFAMFVVICFLFYTLRVPTWL CCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SALGKIGYIWWALDEWFYDEAIWDVPRALWWDGVAWLVGGGASMPDDALRTLAFFVSLWA HHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCHHHHHHHHHHHHHHH ASFVWHWLVVRRNRWFVPYALTVSYIAVLDTFFPYSGNGAIVRLVALGFFAFVWLHGERM HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHH WAKGGAAYIRKWRAAALSIPAIAVTAGYVGPKLPPQWPDPVAFIRSYAADSGEEFDTTTA HHCCCHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHH AVVKKIGYGQNDSRLGGPFIADDTVVFIAKDEDRHYWRVETKDVYTGKGWESFQSEQVKS HHHHHHCCCCCCCCCCCCEEECCEEEEEEECCCCCEEEEECCEEECCCCHHHHHHHHHHH FRNGRLMEHEWWSDKVKTAEQTAEITRQDQAFHLVYPIGLQQVQTSDNIVYRMHMATEKI HHCCCCCCCHHCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHCCCCCEEEEEEECCCEE YTTDINANALPIQRYTITYMEPDFPIEALRSAAPVQDASFLKRYTQLPDTLPKRVRDLAK EEECCCCCCEEEEEEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHH QITEGKETVYDKVKAIEQYFHMNGYAYETTNVAVPRANQDYVDQFLFETKQGYCDNFSTS HHHCCHHHHHHHHHHHHHHHHCCCEEEEECCEECCCCCHHHHHHHHHHHCCCCCCCCHHH MAVLVRSLGIPARWVKGYTSGQLVEEQNGAELYKVRNNDAHSWVEVYFEGVGWVPFEPTQ HHHHHHHCCCCHHHHCCCCCCCEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCC GFVNPYAFSLSTSNEEQQAPSLQPEEQETPRVSIEQLIEPSSQKQDRHWWKQLASVWSWK CCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHH TVLTVFVALAALGGALYVTRRKWWPRWTIFCFRCRRVDGPEWLVPAYLALLRQLHDYGLR HHHHHHHHHHHHCCCEEEECCCCCCCHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC RKEDETLRQYAIEVDRLLETNEMGRLTKWYEQVIYGANSDRIDIREARQLWENLIKRTIT CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]