| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is cshA [H]
Identifier: 138893877
GI number: 138893877
Start: 215058
End: 216461
Strand: Direct
Name: cshA [H]
Synonym: GTNG_0201
Alternate gene names: 138893877
Gene position: 215058-216461 (Clockwise)
Preceding gene: 138893876
Following gene: 138893879
Centisome position: 6.06
GC content: 53.21
Gene sequence:
>1404_bases TTGACGACATTTCAAGAATTAGGATTAAGTAAAGAGGTAATGAAAGCTATCGAGCGGATGGGGTTTGAAGAAACGACCCC AATTCAAGCAAAAACGATCCCGCTCAGCCTACAAAATAAAGATGTGATCGGCCAAGCGCAGACCGGAACGGGGAAAACCG CTGCATTTGGCATCCCGATCGTAGAAAAAGTGGATGTGAAAAACGGTGTCATTCAGGCGCTCGTCGTCGCACCGACACGT GAGCTCGCCATTCAAGTGTCGGAAGAACTGTATAAAATCGGTGCGGTCAAGCGGGTGCGTGTTTTACCGATTTACGGCGG TCAAGATATTGAGCGGCAAATTCGCGCCTTGAAAAAACATCCGCACGTCATCGTCGGCACACCAGGCCGCATCATCGACC ATATTAACCGCGGGACACTCCGCCTCGAACATGTGCGTACGGTCGTTCTCGATGAGGCCGATGAAATGTTGAATATGGGC TTTATTGAAGATATTGAGGCGATTTTACGTCATGTGCCGACTGAGCGGCAGACGCTGTTGTTCTCTGCGACGATGCCGGA TCCGATCCGCCGCATTGCCGAGCGGTTTATGAATGATCCGGAACTCGTCAAAGTGAAGGCGAAGGAAATGACCGTGCCGA ATATTCAGCAATATTATTTGGAAGTGCACGAGAAAAAGAAATTTGACATTTTGACACGGCTTCTTGATATCCAGGCGCCG GAGCTGGCGATTGTGTTTGGCCGCACGAAGCGGCGTGTCGACGAGCTCGCTGAAGCGCTCAACTTGCGTGGCTATGCAGC GGAAGGCATCCATGGCGATTTGAGCCAGGCGAAGCGGCTGTCGGTGTTGCGCAAGTTTAAAGAAGGATCGATCGAAATTT TAGTTGCCACCGACGTCGCAGCGCGCGGATTAGATATTTCCGGTGTGACGCACGTATATAATTTTGACATTCCGCAAGAC CCAGAAAGCTACGTCCATCGAATCGGCCGCACGGGGCGCGCCGGTAAGACAGGGGTGGCGATGACGTTTGTGACACCGCG GGAAATTGGCCAGCTTCATCATATTGAGCGGACGACGAAGCGGAAGATGGAGCGGATGAAGCCGCCGACACTCAATGAGG CGCTTGAAGGCCAGCAGCGCATCGCCATTGAAAAGCTCCTCAATGTCGCGGAAGCGGAAAACTTATCATTTTACAAGCGG GCGGCCGAGGAGTTGCTTGAAGAGCATGACTCAGTGACGATCGTCGCCGCCTGCCTGAAAATGTTGACGCGCGAGCCAGA CACGACACCGGTGAAGTTGACGGAAGAACCGCCTCTAGCAGTCAAACGGGAGAAAAAGCGGGGCAGCCGCCCGGACAGTT CGGCGCGTGGTCGGACGAAAAAACGGCGGATTACGGCGCATTAA
Upstream 100 bases:
>100_bases CGCCTCCTATCATTGCAAATGACGGTATAACATGGTATGATAACTGTCAAACCTTTCTCACGAATAAAGGGACGATTTTT TATAAGGAGTTTGGATAACA
Downstream 100 bases:
>100_bases GCGCCGTTTTTTCATGACCGGATCACATGAAACATCGGTAACTGGGGACGGATGGCTAAAAAAGGAGCCAACAAGCCGCC GGTGGCGAAGCCAAATAGAT
Product: DEAD-box ATP dependent DNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MTTFQELGLSKEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEKVDVKNGVIQALVVAPTR ELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVRTVVLDEADEMLNMG FIEDIEAILRHVPTERQTLLFSATMPDPIRRIAERFMNDPELVKVKAKEMTVPNIQQYYLEVHEKKKFDILTRLLDIQAP ELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGSIEILVATDVAARGLDISGVTHVYNFDIPQD PESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHIERTTKRKMERMKPPTLNEALEGQQRIAIEKLLNVAEAENLSFYKR AAEELLEEHDSVTIVAACLKMLTREPDTTPVKLTEEPPLAVKREKKRGSRPDSSARGRTKKRRITAH
Sequences:
>Translated_467_residues MTTFQELGLSKEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEKVDVKNGVIQALVVAPTR ELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVRTVVLDEADEMLNMG FIEDIEAILRHVPTERQTLLFSATMPDPIRRIAERFMNDPELVKVKAKEMTVPNIQQYYLEVHEKKKFDILTRLLDIQAP ELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGSIEILVATDVAARGLDISGVTHVYNFDIPQD PESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHIERTTKRKMERMKPPTLNEALEGQQRIAIEKLLNVAEAENLSFYKR AAEELLEEHDSVTIVAACLKMLTREPDTTPVKLTEEPPLAVKREKKRGSRPDSSARGRTKKRRITAH >Mature_466_residues TTFQELGLSKEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEKVDVKNGVIQALVVAPTRE LAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVRTVVLDEADEMLNMGF IEDIEAILRHVPTERQTLLFSATMPDPIRRIAERFMNDPELVKVKAKEMTVPNIQQYYLEVHEKKKFDILTRLLDIQAPE LAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGSIEILVATDVAARGLDISGVTHVYNFDIPQDP ESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHIERTTKRKMERMKPPTLNEALEGQQRIAIEKLLNVAEAENLSFYKRA AEELLEEHDSVTIVAACLKMLTREPDTTPVKLTEEPPLAVKREKKRGSRPDSSARGRTKKRRITAH
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=365, Percent_Identity=40.2739726027397, Blast_Score=300, Evalue=3e-81, Organism=Homo sapiens, GI20149629, Length=381, Percent_Identity=40.1574803149606, Blast_Score=281, Evalue=7e-76, Organism=Homo sapiens, GI13129006, Length=425, Percent_Identity=36.9411764705882, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI301171475, Length=371, Percent_Identity=41.5094339622642, Blast_Score=264, Evalue=1e-70, Organism=Homo sapiens, GI87196351, Length=371, Percent_Identity=41.5094339622642, Blast_Score=264, Evalue=2e-70, Organism=Homo sapiens, GI301171467, Length=371, Percent_Identity=41.5094339622642, Blast_Score=263, Evalue=2e-70, Organism=Homo sapiens, GI4503529, Length=366, Percent_Identity=38.5245901639344, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI164664518, Length=354, Percent_Identity=36.7231638418079, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI4758138, Length=379, Percent_Identity=40.1055408970976, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI31542656, Length=372, Percent_Identity=39.5161290322581, Blast_Score=259, Evalue=3e-69, Organism=Homo sapiens, GI224593278, Length=365, Percent_Identity=39.1780821917808, Blast_Score=259, Evalue=3e-69, Organism=Homo sapiens, GI83700235, Length=366, Percent_Identity=38.5245901639344, Blast_Score=257, Evalue=1e-68, Organism=Homo sapiens, GI50659095, Length=425, Percent_Identity=37.8823529411765, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI169881239, Length=370, Percent_Identity=40.5405405405405, Blast_Score=256, Evalue=3e-68, Organism=Homo sapiens, GI13514809, Length=370, Percent_Identity=40.5405405405405, Blast_Score=256, Evalue=3e-68, Organism=Homo sapiens, GI222352149, Length=342, Percent_Identity=42.1052631578947, Blast_Score=251, Evalue=9e-67, Organism=Homo sapiens, GI148613856, Length=375, Percent_Identity=38.4, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI38201710, Length=375, Percent_Identity=38.4, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI45446747, Length=357, Percent_Identity=37.8151260504202, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI45446743, Length=357, Percent_Identity=37.8151260504202, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI41327771, Length=413, Percent_Identity=34.6246973365617, Blast_Score=246, Evalue=3e-65, Organism=Homo sapiens, GI41327776, Length=381, Percent_Identity=36.745406824147, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI21040371, Length=348, Percent_Identity=37.3563218390805, Blast_Score=242, Evalue=4e-64, Organism=Homo sapiens, GI4758112, Length=348, Percent_Identity=35.9195402298851, Blast_Score=237, Evalue=1e-62, Organism=Homo sapiens, GI18375623, Length=348, Percent_Identity=35.9195402298851, Blast_Score=237, Evalue=1e-62, Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=38.375350140056, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=38.375350140056, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI262231852, Length=357, Percent_Identity=38.375350140056, Blast_Score=235, Evalue=7e-62, Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=38.375350140056, Blast_Score=235, Evalue=8e-62, Organism=Homo sapiens, GI55749865, Length=346, Percent_Identity=37.5722543352601, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI188035877, Length=384, Percent_Identity=34.8958333333333, Blast_Score=232, Evalue=5e-61, Organism=Homo sapiens, GI41327773, Length=354, Percent_Identity=37.2881355932203, Blast_Score=229, Evalue=5e-60, Organism=Homo sapiens, GI21071032, Length=360, Percent_Identity=35.2777777777778, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI164419743, Length=369, Percent_Identity=34.9593495934959, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI51094101, Length=369, Percent_Identity=34.9593495934959, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI13514831, Length=364, Percent_Identity=34.6153846153846, Blast_Score=218, Evalue=8e-57, Organism=Homo sapiens, GI164419732, Length=383, Percent_Identity=35.7702349869452, Blast_Score=215, Evalue=7e-56, Organism=Homo sapiens, GI256223453, Length=357, Percent_Identity=34.453781512605, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI6005743, Length=384, Percent_Identity=33.0729166666667, Blast_Score=212, Evalue=5e-55, Organism=Homo sapiens, GI8922886, Length=384, Percent_Identity=32.5520833333333, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI41327779, Length=385, Percent_Identity=35.3246753246753, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI62241022, Length=367, Percent_Identity=33.5149863760218, Blast_Score=202, Evalue=5e-52, Organism=Homo sapiens, GI62241024, Length=345, Percent_Identity=33.3333333333333, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI38327634, Length=375, Percent_Identity=33.6, Blast_Score=191, Evalue=9e-49, Organism=Homo sapiens, GI9506931, Length=398, Percent_Identity=30.1507537688442, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI17505907, Length=406, Percent_Identity=29.5566502463054, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI38569503, Length=359, Percent_Identity=31.1977715877437, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI38569505, Length=359, Percent_Identity=31.1977715877437, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI256773275, Length=398, Percent_Identity=27.6381909547739, Blast_Score=146, Evalue=5e-35, Organism=Homo sapiens, GI4826686, Length=344, Percent_Identity=29.6511627906977, Blast_Score=142, Evalue=9e-34, Organism=Homo sapiens, GI9966805, Length=374, Percent_Identity=27.2727272727273, Blast_Score=138, Evalue=9e-33, Organism=Homo sapiens, GI154759257, Length=404, Percent_Identity=26.7326732673267, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI20336298, Length=215, Percent_Identity=33.953488372093, Blast_Score=120, Evalue=4e-27, Organism=Escherichia coli, GI87082221, Length=428, Percent_Identity=46.0280373831776, Blast_Score=370, Evalue=1e-103, Organism=Escherichia coli, GI1787605, Length=371, Percent_Identity=42.3180592991914, Blast_Score=306, Evalue=2e-84, Organism=Escherichia coli, GI1787016, Length=373, Percent_Identity=40.2144772117962, Blast_Score=288, Evalue=6e-79, Organism=Escherichia coli, GI1790214, Length=351, Percent_Identity=39.6011396011396, Blast_Score=265, Evalue=4e-72, Organism=Escherichia coli, GI1788930, Length=350, Percent_Identity=39.1428571428571, Blast_Score=221, Evalue=5e-59, Organism=Escherichia coli, GI48994977, Length=372, Percent_Identity=26.8817204301075, Blast_Score=93, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71987143, Length=365, Percent_Identity=40.8219178082192, Blast_Score=306, Evalue=1e-83, Organism=Caenorhabditis elegans, GI71995724, Length=365, Percent_Identity=40, Blast_Score=295, Evalue=5e-80, Organism=Caenorhabditis elegans, GI17507121, Length=365, Percent_Identity=39.7260273972603, Blast_Score=293, Evalue=1e-79, Organism=Caenorhabditis elegans, GI17555296, Length=366, Percent_Identity=41.2568306010929, Blast_Score=283, Evalue=1e-76, Organism=Caenorhabditis elegans, GI17552114, Length=388, Percent_Identity=34.2783505154639, Blast_Score=260, Evalue=9e-70, Organism=Caenorhabditis elegans, GI17510309, Length=368, Percent_Identity=41.0326086956522, Blast_Score=253, Evalue=1e-67, Organism=Caenorhabditis elegans, GI17510307, Length=368, Percent_Identity=41.0326086956522, Blast_Score=253, Evalue=2e-67, Organism=Caenorhabditis elegans, GI71995514, Length=368, Percent_Identity=41.0326086956522, Blast_Score=252, Evalue=3e-67, Organism=Caenorhabditis elegans, GI32565321, Length=380, Percent_Identity=36.5789473684211, Blast_Score=246, Evalue=3e-65, Organism=Caenorhabditis elegans, GI71982858, Length=348, Percent_Identity=35.3448275862069, Blast_Score=235, Evalue=4e-62, Organism=Caenorhabditis elegans, GI115532546, Length=379, Percent_Identity=34.3007915567282, Blast_Score=234, Evalue=7e-62, Organism=Caenorhabditis elegans, GI115532548, Length=379, Percent_Identity=34.3007915567282, Blast_Score=234, Evalue=1e-61, Organism=Caenorhabditis elegans, GI71995718, Length=372, Percent_Identity=38.4408602150538, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI71999646, Length=353, Percent_Identity=36.8271954674221, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI71999644, Length=353, Percent_Identity=36.8271954674221, Blast_Score=232, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17510559, Length=401, Percent_Identity=33.9152119700748, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17552642, Length=384, Percent_Identity=36.9791666666667, Blast_Score=231, Evalue=6e-61, Organism=Caenorhabditis elegans, GI115533224, Length=334, Percent_Identity=40.1197604790419, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI17537549, Length=357, Percent_Identity=36.1344537815126, Blast_Score=228, Evalue=6e-60, Organism=Caenorhabditis elegans, GI86570094, Length=357, Percent_Identity=37.2549019607843, Blast_Score=228, Evalue=7e-60, Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=37.1967654986523, Blast_Score=221, Evalue=9e-58, Organism=Caenorhabditis elegans, GI17507945, Length=361, Percent_Identity=36.01108033241, Blast_Score=217, Evalue=1e-56, Organism=Caenorhabditis elegans, GI17507881, Length=423, Percent_Identity=33.5697399527187, Blast_Score=214, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17509811, Length=363, Percent_Identity=34.435261707989, Blast_Score=212, Evalue=4e-55, Organism=Caenorhabditis elegans, GI17507879, Length=373, Percent_Identity=36.4611260053619, Blast_Score=211, Evalue=6e-55, Organism=Caenorhabditis elegans, GI17536099, Length=401, Percent_Identity=32.6683291770574, Blast_Score=208, Evalue=6e-54, Organism=Caenorhabditis elegans, GI17536101, Length=401, Percent_Identity=32.6683291770574, Blast_Score=207, Evalue=9e-54, Organism=Caenorhabditis elegans, GI17536103, Length=401, Percent_Identity=32.6683291770574, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17553716, Length=369, Percent_Identity=32.7913279132791, Blast_Score=201, Evalue=6e-52, Organism=Caenorhabditis elegans, GI17505370, Length=416, Percent_Identity=32.4519230769231, Blast_Score=198, Evalue=5e-51, Organism=Caenorhabditis elegans, GI193206561, Length=344, Percent_Identity=31.9767441860465, Blast_Score=192, Evalue=4e-49, Organism=Caenorhabditis elegans, GI25148203, Length=420, Percent_Identity=29.5238095238095, Blast_Score=185, Evalue=5e-47, Organism=Caenorhabditis elegans, GI193208216, Length=382, Percent_Identity=31.413612565445, Blast_Score=177, Evalue=9e-45, Organism=Caenorhabditis elegans, GI17508543, Length=373, Percent_Identity=27.3458445040214, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17556951, Length=386, Percent_Identity=27.720207253886, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI25148291, Length=370, Percent_Identity=29.1891891891892, Blast_Score=151, Evalue=6e-37, Organism=Caenorhabditis elegans, GI17507641, Length=388, Percent_Identity=29.3814432989691, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI71990816, Length=375, Percent_Identity=32.2666666666667, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI32564046, Length=375, Percent_Identity=29.0666666666667, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71982862, Length=201, Percent_Identity=34.3283582089552, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI25148205, Length=344, Percent_Identity=27.906976744186, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI71997889, Length=351, Percent_Identity=26.2108262108262, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71987152, Length=102, Percent_Identity=43.1372549019608, Blast_Score=105, Evalue=8e-23, Organism=Saccharomyces cerevisiae, GI6320224, Length=376, Percent_Identity=37.2340425531915, Blast_Score=278, Evalue=2e-75, Organism=Saccharomyces cerevisiae, GI6324217, Length=360, Percent_Identity=40, Blast_Score=272, Evalue=8e-74, Organism=Saccharomyces cerevisiae, GI6321856, Length=363, Percent_Identity=40.771349862259, Blast_Score=271, Evalue=2e-73, Organism=Saccharomyces cerevisiae, GI6320041, Length=374, Percent_Identity=35.8288770053476, Blast_Score=252, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6325138, Length=365, Percent_Identity=40.2739726027397, Blast_Score=251, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6322912, Length=364, Percent_Identity=36.5384615384615, Blast_Score=247, Evalue=2e-66, Organism=Saccharomyces cerevisiae, GI6322323, Length=364, Percent_Identity=36.5384615384615, Blast_Score=247, Evalue=2e-66, Organism=Saccharomyces cerevisiae, GI6324778, Length=378, Percent_Identity=38.0952380952381, Blast_Score=246, Evalue=4e-66, Organism=Saccharomyces cerevisiae, GI6321360, Length=358, Percent_Identity=41.340782122905, Blast_Score=243, Evalue=4e-65, Organism=Saccharomyces cerevisiae, GI6324620, Length=353, Percent_Identity=36.8271954674221, Blast_Score=234, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6323021, Length=383, Percent_Identity=36.0313315926893, Blast_Score=230, Evalue=4e-61, Organism=Saccharomyces cerevisiae, GI6320119, Length=353, Percent_Identity=33.9943342776204, Blast_Score=224, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6322427, Length=384, Percent_Identity=35.15625, Blast_Score=220, Evalue=5e-58, Organism=Saccharomyces cerevisiae, GI6321963, Length=380, Percent_Identity=35.2631578947368, Blast_Score=216, Evalue=7e-57, Organism=Saccharomyces cerevisiae, GI6323947, Length=367, Percent_Identity=36.2397820163488, Blast_Score=214, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6320449, Length=394, Percent_Identity=34.5177664974619, Blast_Score=197, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6319714, Length=382, Percent_Identity=32.4607329842932, Blast_Score=196, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6319618, Length=422, Percent_Identity=31.7535545023697, Blast_Score=193, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6321111, Length=369, Percent_Identity=33.3333333333333, Blast_Score=193, Evalue=5e-50, Organism=Saccharomyces cerevisiae, GI6320400, Length=389, Percent_Identity=33.9331619537275, Blast_Score=191, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6323306, Length=458, Percent_Identity=29.0393013100437, Blast_Score=180, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6321267, Length=365, Percent_Identity=33.972602739726, Blast_Score=172, Evalue=8e-44, Organism=Saccharomyces cerevisiae, GI6320173, Length=220, Percent_Identity=40.4545454545455, Blast_Score=169, Evalue=9e-43, Organism=Saccharomyces cerevisiae, GI6324366, Length=378, Percent_Identity=25.6613756613757, Blast_Score=120, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6321374, Length=372, Percent_Identity=24.7311827956989, Blast_Score=96, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6322876, Length=235, Percent_Identity=30.6382978723404, Blast_Score=96, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6323844, Length=369, Percent_Identity=22.2222222222222, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24645031, Length=365, Percent_Identity=39.4520547945205, Blast_Score=288, Evalue=4e-78, Organism=Drosophila melanogaster, GI24585582, Length=381, Percent_Identity=39.1076115485564, Blast_Score=270, Evalue=1e-72, Organism=Drosophila melanogaster, GI24582080, Length=365, Percent_Identity=38.3561643835616, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI24582078, Length=365, Percent_Identity=38.3561643835616, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI17136248, Length=365, Percent_Identity=38.3561643835616, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI24582075, Length=365, Percent_Identity=38.3561643835616, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI28574962, Length=384, Percent_Identity=39.84375, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI24584399, Length=350, Percent_Identity=40.2857142857143, Blast_Score=259, Evalue=3e-69, Organism=Drosophila melanogaster, GI24583279, Length=354, Percent_Identity=36.1581920903955, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI24583281, Length=354, Percent_Identity=36.1581920903955, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI24644479, Length=354, Percent_Identity=40.1129943502825, Blast_Score=255, Evalue=6e-68, Organism=Drosophila melanogaster, GI24644487, Length=383, Percent_Identity=38.1201044386423, Blast_Score=254, Evalue=7e-68, Organism=Drosophila melanogaster, GI45551833, Length=383, Percent_Identity=38.1201044386423, Blast_Score=254, Evalue=7e-68, Organism=Drosophila melanogaster, GI24644485, Length=383, Percent_Identity=38.1201044386423, Blast_Score=254, Evalue=7e-68, Organism=Drosophila melanogaster, GI281361218, Length=383, Percent_Identity=38.1201044386423, Blast_Score=254, Evalue=8e-68, Organism=Drosophila melanogaster, GI24644481, Length=383, Percent_Identity=38.1201044386423, Blast_Score=254, Evalue=8e-68, Organism=Drosophila melanogaster, GI24644483, Length=383, Percent_Identity=38.1201044386423, Blast_Score=254, Evalue=8e-68, Organism=Drosophila melanogaster, GI21356161, Length=356, Percent_Identity=38.7640449438202, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI17985987, Length=373, Percent_Identity=40.7506702412869, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI24642151, Length=358, Percent_Identity=38.8268156424581, Blast_Score=249, Evalue=3e-66, Organism=Drosophila melanogaster, GI24584994, Length=417, Percent_Identity=36.4508393285372, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI21355075, Length=343, Percent_Identity=37.9008746355685, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI24662330, Length=366, Percent_Identity=38.2513661202186, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI18857967, Length=362, Percent_Identity=37.5690607734807, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI28575014, Length=353, Percent_Identity=35.1274787535411, Blast_Score=229, Evalue=4e-60, Organism=Drosophila melanogaster, GI17136814, Length=374, Percent_Identity=36.6310160427808, Blast_Score=225, Evalue=4e-59, Organism=Drosophila melanogaster, GI24581954, Length=347, Percent_Identity=35.7348703170029, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24581952, Length=347, Percent_Identity=35.7348703170029, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24581956, Length=347, Percent_Identity=35.7348703170029, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=34.9162011173184, Blast_Score=218, Evalue=1e-56, Organism=Drosophila melanogaster, GI281365720, Length=311, Percent_Identity=40.8360128617363, Blast_Score=215, Evalue=6e-56, Organism=Drosophila melanogaster, GI28571808, Length=417, Percent_Identity=33.0935251798561, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI28571809, Length=417, Percent_Identity=33.0935251798561, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI21355559, Length=381, Percent_Identity=35.4330708661417, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI17647335, Length=359, Percent_Identity=31.1977715877437, Blast_Score=191, Evalue=7e-49, Organism=Drosophila melanogaster, GI24642822, Length=371, Percent_Identity=32.8840970350404, Blast_Score=185, Evalue=7e-47, Organism=Drosophila melanogaster, GI24643725, Length=383, Percent_Identity=31.331592689295, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI20130173, Length=454, Percent_Identity=27.9735682819383, Blast_Score=181, Evalue=9e-46, Organism=Drosophila melanogaster, GI18859659, Length=443, Percent_Identity=29.7968397291196, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI28571338, Length=443, Percent_Identity=29.7968397291196, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI24666101, Length=346, Percent_Identity=33.5260115606936, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI24668515, Length=342, Percent_Identity=31.5789473684211, Blast_Score=155, Evalue=7e-38, Organism=Drosophila melanogaster, GI19920478, Length=368, Percent_Identity=29.3478260869565, Blast_Score=145, Evalue=5e-35, Organism=Drosophila melanogaster, GI24640164, Length=348, Percent_Identity=24.4252873563218, Blast_Score=121, Evalue=8e-28, Organism=Drosophila melanogaster, GI17136666, Length=436, Percent_Identity=25.6880733944954, Blast_Score=120, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 52554; Mature: 52423
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFQELGLSKEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPI CCCHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEECCCC VEKVDVKNGVIQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKH CEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHHHHC PHVIVGTPGRIIDHINRGTLRLEHVRTVVLDEADEMLNMGFIEDIEAILRHVPTERQTLL CCEEEECCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEE FSATMPDPIRRIAERFMNDPELVKVKAKEMTVPNIQQYYLEVHEKKKFDILTRLLDIQAP EECCCCHHHHHHHHHHCCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC ELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGSIEILVATDVA CEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECHH ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHIERTTK HCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHH RKMERMKPPTLNEALEGQQRIAIEKLLNVAEAENLSFYKRAAEELLEEHDSVTIVAACLK HHHHHCCCCCHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHH MLTREPDTTPVKLTEEPPLAVKREKKRGSRPDSSARGRTKKRRITAH HHHCCCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTFQELGLSKEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPI CCHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEECCCC VEKVDVKNGVIQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKH CEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHHHHC PHVIVGTPGRIIDHINRGTLRLEHVRTVVLDEADEMLNMGFIEDIEAILRHVPTERQTLL CCEEEECCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEE FSATMPDPIRRIAERFMNDPELVKVKAKEMTVPNIQQYYLEVHEKKKFDILTRLLDIQAP EECCCCHHHHHHHHHHCCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC ELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGSIEILVATDVA CEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECHH ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHIERTTK HCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHH RKMERMKPPTLNEALEGQQRIAIEKLLNVAEAENLSFYKRAAEELLEEHDSVTIVAACLK HHHHHCCCCCHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHH MLTREPDTTPVKLTEEPPLAVKREKKRGSRPDSSARGRTKKRRITAH HHHCCCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA