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The map label for this gene is ycfX [C]

Identifier: 138893868

GI number: 138893868

Start: 205470

End: 206399

Strand: Direct

Name: ycfX [C]

Synonym: GTNG_0192

Alternate gene names: 138893868

Gene position: 205470-206399 (Clockwise)

Preceding gene: 138893867

Following gene: 138893869

Centisome position: 5.79

GC content: 51.51

Gene sequence:

>930_bases
ATGCGTTACTATATCGTTTTTGATATCGGTGGTACGTATGTGAAGCATGCCGTCATGAACGAGCATGGCGATTTTTTACA
GAAAGGGCGTTATCGGTCGGAGCGTCATGACTTTCATCAATTTCGCGATGACTTACTTCATATTGTTCGTCAAGCTCGAG
CGAATTATGAGCTTTCCGGCATCGCGATCAGTTCTGCGGGCAGCGTTGATAGCGACAGCGGCATCATCGGCGGAAGCAGC
GCCTTACCGTGCATTCACGGCCCAAACTTTAAAGAAGTATTTGGCGGGGCGACGGGCCTGCCGGTAGAACTGGAAAACGA
CGCAAACTGCGCAGCGCTCGGTGAGTTATGGAAAGGAGCGGGGCGGGGCTGCCGTGATATTGCGTTTGTCATTGTCGGCA
CCGGTATCGGCGGGGCGATTGTGAAAGACGGGCACATTCATAAAGGAGTGCACCTGCACGGTGGGGAATTTGGCTATATG
TTGATGGATGTTCGCTATAAAAACGGAACGGTTGAATGCAAAACATGGAGTGAACTGGCGGCGACAAGTGCGCTAATCCG
GATGACTGCTGAGGAAAAGGGAATACCGCAGAGTGAACTGGACGGAGAAAAAGTATTTGCGTTGGCCGAGAGCGGTGATG
AGGCCGCGCAAAGTGCGATCGACCGGTTTTACTTCTCGTTAGCCCACGGCATTTTTAACTTGCAGTATGCATACGACCCG
GAAAAAATCATTTTAGGCGGAGCCATTAGCAACCGTCCGGATTTTGTTGACGAAATTAACAAGCGGCTTTCGGTGCTGTT
GTCGCTCGTGCCGATCGCGAAAGTTCAACCGGTTGTGGCGACGTGCCAGTTTAAAAACGATGCAAACTTGCTCGGTGCCT
TGTATCATTACTTAGAGCGTCGCGGAGAGTTAGGGGAAGCATCCGGCTGA

Upstream 100 bases:

>100_bases
TGACTCGACGGCGAATACATAGAATACATAAAAGAAGGAAAACAGCTAAGCCGCATGGCGCTCGAGAAGAGGAAAGATAA
AAATGAAGGAGGCGTCATCG

Downstream 100 bases:

>100_bases
TCGGCATCCCACTGATGGGGCAGCCCCATTGGATTCATCCGATCCGCGCCGTTATTTGTACAAGCAAAGCGTCCATCCGA
ACAATGCGTGGGTAGTAGAA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MRYYIVFDIGGTYVKHAVMNEHGDFLQKGRYRSERHDFHQFRDDLLHIVRQARANYELSGIAISSAGSVDSDSGIIGGSS
ALPCIHGPNFKEVFGGATGLPVELENDANCAALGELWKGAGRGCRDIAFVIVGTGIGGAIVKDGHIHKGVHLHGGEFGYM
LMDVRYKNGTVECKTWSELAATSALIRMTAEEKGIPQSELDGEKVFALAESGDEAAQSAIDRFYFSLAHGIFNLQYAYDP
EKIILGGAISNRPDFVDEINKRLSVLLSLVPIAKVQPVVATCQFKNDANLLGALYHYLERRGELGEASG

Sequences:

>Translated_309_residues
MRYYIVFDIGGTYVKHAVMNEHGDFLQKGRYRSERHDFHQFRDDLLHIVRQARANYELSGIAISSAGSVDSDSGIIGGSS
ALPCIHGPNFKEVFGGATGLPVELENDANCAALGELWKGAGRGCRDIAFVIVGTGIGGAIVKDGHIHKGVHLHGGEFGYM
LMDVRYKNGTVECKTWSELAATSALIRMTAEEKGIPQSELDGEKVFALAESGDEAAQSAIDRFYFSLAHGIFNLQYAYDP
EKIILGGAISNRPDFVDEINKRLSVLLSLVPIAKVQPVVATCQFKNDANLLGALYHYLERRGELGEASG
>Mature_309_residues
MRYYIVFDIGGTYVKHAVMNEHGDFLQKGRYRSERHDFHQFRDDLLHIVRQARANYELSGIAISSAGSVDSDSGIIGGSS
ALPCIHGPNFKEVFGGATGLPVELENDANCAALGELWKGAGRGCRDIAFVIVGTGIGGAIVKDGHIHKGVHLHGGEFGYM
LMDVRYKNGTVECKTWSELAATSALIRMTAEEKGIPQSELDGEKVFALAESGDEAAQSAIDRFYFSLAHGIFNLQYAYDP
EKIILGGAISNRPDFVDEINKRLSVLLSLVPIAKVQPVVATCQFKNDANLLGALYHYLERRGELGEASG

Specific function: Unknown

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Escherichia coli, GI1787363, Length=313, Percent_Identity=24.6006389776358, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI87081733, Length=257, Percent_Identity=26.0700389105058, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1787878, Length=260, Percent_Identity=23.8461538461538, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 33594; Mature: 33594

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYYIVFDIGGTYVKHAVMNEHGDFLQKGRYRSERHDFHQFRDDLLHIVRQARANYELSG
CEEEEEEECCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
IAISSAGSVDSDSGIIGGSSALPCIHGPNFKEVFGGATGLPVELENDANCAALGELWKGA
EEEECCCCCCCCCCEECCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCHHHHHHHHHHC
GRGCRDIAFVIVGTGIGGAIVKDGHIHKGVHLHGGEFGYMLMDVRYKNGTVECKTWSELA
CCCCCEEEEEEEECCCCCCEEECCCEECCEEEECCCEEEEEEEEEECCCEEEECCHHHHH
ATSALIRMTAEEKGIPQSELDGEKVFALAESGDEAAQSAIDRFYFSLAHGIFNLQYAYDP
HHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEEEECC
EKIILGGAISNRPDFVDEINKRLSVLLSLVPIAKVQPVVATCQFKNDANLLGALYHYLER
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHH
RGELGEASG
CCCCCCCCC
>Mature Secondary Structure
MRYYIVFDIGGTYVKHAVMNEHGDFLQKGRYRSERHDFHQFRDDLLHIVRQARANYELSG
CEEEEEEECCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
IAISSAGSVDSDSGIIGGSSALPCIHGPNFKEVFGGATGLPVELENDANCAALGELWKGA
EEEECCCCCCCCCCEECCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCHHHHHHHHHHC
GRGCRDIAFVIVGTGIGGAIVKDGHIHKGVHLHGGEFGYMLMDVRYKNGTVECKTWSELA
CCCCCEEEEEEEECCCCCCEEECCCEECCEEEECCCEEEEEEEEEECCCEEEECCHHHHH
ATSALIRMTAEEKGIPQSELDGEKVFALAESGDEAAQSAIDRFYFSLAHGIFNLQYAYDP
HHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEEEECC
EKIILGGAISNRPDFVDEINKRLSVLLSLVPIAKVQPVVATCQFKNDANLLGALYHYLER
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHH
RGELGEASG
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842; 8177218 [H]