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The map label for this gene is tnpA [H]

Identifier: 138893825

GI number: 138893825

Start: 157534

End: 158709

Strand: Direct

Name: tnpA [H]

Synonym: GTNG_0146

Alternate gene names: 138893825

Gene position: 157534-158709 (Clockwise)

Preceding gene: 138893824

Following gene: 138893826

Centisome position: 4.44

GC content: 46.09

Gene sequence:

>1176_bases
ATGTACTCTCAGTTTATCAAAGAACTTATCGATTTGCCAGATGTTTTGATTGAAAAGGAACGAAAAGAAGGAGAACGCTG
GATTTTCGAACTTTCTCTTCCCGAACAATGTCCGTTATGTCCTGTCTGCTTGCAACGCACAACAAAAATGACCCGAAAAA
AGAAGCAATGGATGCATGGCTATGCCCAACGGATCGGGGTTTTTTGGATTGAACTCCCAGTGGAACGGAGACGTTGTTGC
ACTTGTGGCATGACATTCAGCACCTCTTATCCAGGGATCTCCCCTCGAAGTGTGGCAACGGACGTCTTTCAACAATGGGT
GGCGCAATCTTGCATTGGAACATCCATTCAGGCGGTGGCTCGTATGCTAAAACTCCCTTACACGACTGTTGAACGTTGGT
TTTATACCCATGCCCCTTCCTTTTTGTCGAATACCATTCAGCCAAAGGCGGTTTGTGTCGATGAGTTTGCTTTTCGAAAA
GGGCATGACTATGGAGTGGCGGTCATGGATGCAGAGACGGGAGAAGTGTATTCCATCGAAGCAGGAAAGAATGAGGCAGC
CATTCGAAGTGCATTGACGTGTGTGTCTTCTTCTGTCCAGTGTGTCGTGAGCGATTTGGCTCCGGCCATGAAAAAAGCCA
TTCAAGGGGCGTGTCCAGAAGCGGTACATGTGGTCGATTATTTTCATGTCATTCAGCTGTTTACGGAAGCCTTGGATCGG
TGTCGCAAATATTTAGCCAAAGGGGGCAAGAAACACGGAAATGTTCGGTACGTTTGTTGTTTATTGAGCCAATGCCCAGA
GAAATTAACCGAGGAGGAACGTCAAACGGTACGGGAGTGGTGTAAAGAAAGCGATTACCTACAGGTTGTTTATCAATCCC
TCCAACATTTTCGCTATGTATCCAAAAGCCAAGGCGAACGACAGGCGAAACGTCGCTTGGAAGCTTGGATTCATCGGTAT
TTGTTTTGTACTTGTTCTGTTGTGCGTGCCATCGCAAAAGCACTCGCAAAACGAACAGAAGAAATCATTTCGTGCATTTT
GTCGCCTTATTCGAATGGGAAAATGGAAGGGACGAATAACAAGATCAAGCTGATCAAACGCCGAGGGTATGGATACAGAA
ATATCCAAAGATTTGCATTGCGAGTTCGGCTAGAAACGGCTACCACACTTCAATGA

Upstream 100 bases:

>100_bases
TAGAACGCAGTAGGAAAATAAAGAAAATAGAGGGTACAAAAAATGCGAATTTTCCTGTATGGTAAAGGTGACCAAACCAA
ACCATTGGAGGAAAATTCGC

Downstream 100 bases:

>100_bases
TAGATGCAAGTACATCTTTTGGTGATGAACCATTAAAAAAAGAATTAGGGCGATCCGAAAAGGCGACCAAAACGCATATG
CCGATCTTGTCGATTTGTAT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MYSQFIKELIDLPDVLIEKERKEGERWIFELSLPEQCPLCPVCLQRTTKMTRKKKQWMHGYAQRIGVFWIELPVERRRCC
TCGMTFSTSYPGISPRSVATDVFQQWVAQSCIGTSIQAVARMLKLPYTTVERWFYTHAPSFLSNTIQPKAVCVDEFAFRK
GHDYGVAVMDAETGEVYSIEAGKNEAAIRSALTCVSSSVQCVVSDLAPAMKKAIQGACPEAVHVVDYFHVIQLFTEALDR
CRKYLAKGGKKHGNVRYVCCLLSQCPEKLTEEERQTVREWCKESDYLQVVYQSLQHFRYVSKSQGERQAKRRLEAWIHRY
LFCTCSVVRAIAKALAKRTEEIISCILSPYSNGKMEGTNNKIKLIKRRGYGYRNIQRFALRVRLETATTLQ

Sequences:

>Translated_391_residues
MYSQFIKELIDLPDVLIEKERKEGERWIFELSLPEQCPLCPVCLQRTTKMTRKKKQWMHGYAQRIGVFWIELPVERRRCC
TCGMTFSTSYPGISPRSVATDVFQQWVAQSCIGTSIQAVARMLKLPYTTVERWFYTHAPSFLSNTIQPKAVCVDEFAFRK
GHDYGVAVMDAETGEVYSIEAGKNEAAIRSALTCVSSSVQCVVSDLAPAMKKAIQGACPEAVHVVDYFHVIQLFTEALDR
CRKYLAKGGKKHGNVRYVCCLLSQCPEKLTEEERQTVREWCKESDYLQVVYQSLQHFRYVSKSQGERQAKRRLEAWIHRY
LFCTCSVVRAIAKALAKRTEEIISCILSPYSNGKMEGTNNKIKLIKRRGYGYRNIQRFALRVRLETATTLQ
>Mature_391_residues
MYSQFIKELIDLPDVLIEKERKEGERWIFELSLPEQCPLCPVCLQRTTKMTRKKKQWMHGYAQRIGVFWIELPVERRRCC
TCGMTFSTSYPGISPRSVATDVFQQWVAQSCIGTSIQAVARMLKLPYTTVERWFYTHAPSFLSNTIQPKAVCVDEFAFRK
GHDYGVAVMDAETGEVYSIEAGKNEAAIRSALTCVSSSVQCVVSDLAPAMKKAIQGACPEAVHVVDYFHVIQLFTEALDR
CRKYLAKGGKKHGNVRYVCCLLSQCPEKLTEEERQTVREWCKESDYLQVVYQSLQHFRYVSKSQGERQAKRRLEAWIHRY
LFCTCSVVRAIAKALAKRTEEIISCILSPYSNGKMEGTNNKIKLIKRRGYGYRNIQRFALRVRLETATTLQ

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 44930; Mature: 44930

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSQFIKELIDLPDVLIEKERKEGERWIFELSLPEQCPLCPVCLQRTTKMTRKKKQWMHG
CHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YAQRIGVFWIELPVERRRCCTCGMTFSTSYPGISPRSVATDVFQQWVAQSCIGTSIQAVA
HHHHHHHEEEECCHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHH
RMLKLPYTTVERWFYTHAPSFLSNTIQPKAVCVDEFAFRKGHDYGVAVMDAETGEVYSIE
HHHHCCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEE
AGKNEAAIRSALTCVSSSVQCVVSDLAPAMKKAIQGACPEAVHVVDYFHVIQLFTEALDR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
CRKYLAKGGKKHGNVRYVCCLLSQCPEKLTEEERQTVREWCKESDYLQVVYQSLQHFRYV
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
SKSQGERQAKRRLEAWIHRYLFCTCSVVRAIAKALAKRTEEIISCILSPYSNGKMEGTNN
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
KIKLIKRRGYGYRNIQRFALRVRLETATTLQ
HHEEEHHCCCCHHHHHHHHHHHEECHHHCCC
>Mature Secondary Structure
MYSQFIKELIDLPDVLIEKERKEGERWIFELSLPEQCPLCPVCLQRTTKMTRKKKQWMHG
CHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YAQRIGVFWIELPVERRRCCTCGMTFSTSYPGISPRSVATDVFQQWVAQSCIGTSIQAVA
HHHHHHHEEEECCHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHH
RMLKLPYTTVERWFYTHAPSFLSNTIQPKAVCVDEFAFRKGHDYGVAVMDAETGEVYSIE
HHHHCCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEE
AGKNEAAIRSALTCVSSSVQCVVSDLAPAMKKAIQGACPEAVHVVDYFHVIQLFTEALDR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
CRKYLAKGGKKHGNVRYVCCLLSQCPEKLTEEERQTVREWCKESDYLQVVYQSLQHFRYV
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
SKSQGERQAKRRLEAWIHRYLFCTCSVVRAIAKALAKRTEEIISCILSPYSNGKMEGTNN
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
KIKLIKRRGYGYRNIQRFALRVRLETATTLQ
HHEEEHHCCCCHHHHHHHHHHHEECHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]