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The map label for this gene is yaaH [H]

Identifier: 138893693

GI number: 138893693

Start: 23402

End: 24688

Strand: Reverse

Name: yaaH [H]

Synonym: GTNG_0014

Alternate gene names: 138893693

Gene position: 24688-23402 (Counterclockwise)

Preceding gene: 138893708

Following gene: 138893687

Centisome position: 0.7

GC content: 53.69

Gene sequence:

>1287_bases
ATGCAAATCCATGTCATACAGAGCGGACAAACGTTGAGCGGGATCGCTGAGGCATACGGAACGACCGTTGAGGAAATTGT
CCGGGCCAACAAACTTCCAAATCCTGATGAACTTGTTGTCGGCCAGACGCTCGTGATCCCGATCGTCGGCCGTTTTTATT
GGGTGCAACGCGGCGACAGTTTATGGTCGATTGCACGCCGATTTTCACTTCCGATGCAACGTCTCGCAGAGGTGAACCGC
CTCTCCTTAAACGCCCCTCTGCGGGTCGGCCAGCGGCTTTACATCCCGCCCGGCGCTAAGCGGAGGGCAGAGTTTAACGC
ATATATCGAACCGCGTGGAACGACCGTCAGCCCGGCACTGGAAGCAAGCGCCCGTGAGGCCGCTCCGTATTTGACCTATT
TAAGCCCCTTTTATTTTTCCATCCGGCGCGACGCGACACTGCAAGGACCGCCGCTTGATGATTTTCCTGCCATCGCCCGC
GCCAACCGCGTCACGCTTGTCATGGTTGTCGCCAACATTGAAAACGGACAGTTCAGCGATGAGCTCGGTGCGCTCATTTT
AACCAATGAAACGCTGCAAAACCGCTTGCTTGACAACATTGTCGCGACCGCGAGGCAATACGGTTTCCGCGACATTCATT
TCGATTTTGAATATTTGCGCCCGGAAGACCGCGAGGCATACAACGCCTTTTTACGCAAGGCGAAACGCCGATTTGAACGA
GAAGGATGGTTGATATCGACCGCTTTGGCGCCGAAAACGAGTGCAACTCAGCGCGGGCGTTGGTACGAGGCGCACGACTA
CCGCGCCCACGGTCAAATTGTCGATTTTGTCGTCATTATGACGTACGAATGGGGCTACAGCGGTGGACCGCCGATGCCTG
TTTCTCCGATCGGACCGGTTCGACGCGTTCTCGAGTACGCCCTTTCGGAAATGCCGGCAGGAAAAATTTTAATGGGACAA
AACTTGTATGGCTATGACTGGACGTTGCCGTATGTACCGGGTGGCCCGTACGCACGAGCCATTAGCCCGCAACAAGCCAT
CGCTCTCGCCGCAAAGTATAACGTTGCTATCGAATACGATGTCGAGGCGCAGGCGCCGCATTTCCGCTACCGGGATGAGA
ATGGCCGTGAACATGAAGTATGGTTTGAAGATGCCCGTTCCATCCAAGCGAAATTTAATTTAGTTAAGGAACTTGGTTTG
CGTGGAGTAAGTTACTGGAAGCTTGGTCTTGACTTCCCGCAAAATTGGCTGCTGATCAACGATCAATTCACGGTGGTGAA
AAAATAA

Upstream 100 bases:

>100_bases
CTCATCGTTGTTCATCATATACCCCTTCGTGCAAACGGTCATTTCTCTTCTCTTTCCATCATAAAATATGGAGAATAAAG
ACGCAACTAGGAGGTCAAGT

Downstream 100 bases:

>100_bases
AAACACCAAGGCCAAAACAATAAAAAAACCCGCCTTCGATCGGCGGGTTTTTTTATGGCTGGAAACGGCACCCTTGGTCA
GCCGTTTCGGCTAGCAATCT

Product: spore peptidoglycan hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MQIHVIQSGQTLSGIAEAYGTTVEEIVRANKLPNPDELVVGQTLVIPIVGRFYWVQRGDSLWSIARRFSLPMQRLAEVNR
LSLNAPLRVGQRLYIPPGAKRRAEFNAYIEPRGTTVSPALEASAREAAPYLTYLSPFYFSIRRDATLQGPPLDDFPAIAR
ANRVTLVMVVANIENGQFSDELGALILTNETLQNRLLDNIVATARQYGFRDIHFDFEYLRPEDREAYNAFLRKAKRRFER
EGWLISTALAPKTSATQRGRWYEAHDYRAHGQIVDFVVIMTYEWGYSGGPPMPVSPIGPVRRVLEYALSEMPAGKILMGQ
NLYGYDWTLPYVPGGPYARAISPQQAIALAAKYNVAIEYDVEAQAPHFRYRDENGREHEVWFEDARSIQAKFNLVKELGL
RGVSYWKLGLDFPQNWLLINDQFTVVKK

Sequences:

>Translated_428_residues
MQIHVIQSGQTLSGIAEAYGTTVEEIVRANKLPNPDELVVGQTLVIPIVGRFYWVQRGDSLWSIARRFSLPMQRLAEVNR
LSLNAPLRVGQRLYIPPGAKRRAEFNAYIEPRGTTVSPALEASAREAAPYLTYLSPFYFSIRRDATLQGPPLDDFPAIAR
ANRVTLVMVVANIENGQFSDELGALILTNETLQNRLLDNIVATARQYGFRDIHFDFEYLRPEDREAYNAFLRKAKRRFER
EGWLISTALAPKTSATQRGRWYEAHDYRAHGQIVDFVVIMTYEWGYSGGPPMPVSPIGPVRRVLEYALSEMPAGKILMGQ
NLYGYDWTLPYVPGGPYARAISPQQAIALAAKYNVAIEYDVEAQAPHFRYRDENGREHEVWFEDARSIQAKFNLVKELGL
RGVSYWKLGLDFPQNWLLINDQFTVVKK
>Mature_428_residues
MQIHVIQSGQTLSGIAEAYGTTVEEIVRANKLPNPDELVVGQTLVIPIVGRFYWVQRGDSLWSIARRFSLPMQRLAEVNR
LSLNAPLRVGQRLYIPPGAKRRAEFNAYIEPRGTTVSPALEASAREAAPYLTYLSPFYFSIRRDATLQGPPLDDFPAIAR
ANRVTLVMVVANIENGQFSDELGALILTNETLQNRLLDNIVATARQYGFRDIHFDFEYLRPEDREAYNAFLRKAKRRFER
EGWLISTALAPKTSATQRGRWYEAHDYRAHGQIVDFVVIMTYEWGYSGGPPMPVSPIGPVRRVLEYALSEMPAGKILMGQ
NLYGYDWTLPYVPGGPYARAISPQQAIALAAKYNVAIEYDVEAQAPHFRYRDENGREHEVWFEDARSIQAKFNLVKELGL
RGVSYWKLGLDFPQNWLLINDQFTVVKK

Specific function: May be required for the L-alanine-stimulated germination pathway [H]

COG id: COG3858

COG function: function code R; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Spore wall (Probable). Note=Probably localized either on the surface of the outer spore membrane and/or in the inner spore coat [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011583
- InterPro:   IPR001223
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF00704 Glyco_hydro_18; PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 48692; Mature: 48692

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIHVIQSGQTLSGIAEAYGTTVEEIVRANKLPNPDELVVGQTLVIPIVGRFYWVQRGDS
CEEEEEECCCHHHHHHHHHCCHHHHHHHHCCCCCCCCEEECCEEEEEHHHHEEEEECCCH
LWSIARRFSLPMQRLAEVNRLSLNAPLRVGQRLYIPPGAKRRAEFNAYIEPRGTTVSPAL
HHHHHHHHCCHHHHHHHHHHEECCCCHHCCCEEECCCCCCCCCCEEEEECCCCCEECHHH
EASAREAAPYLTYLSPFYFSIRRDATLQGPPLDDFPAIARANRVTLVMVVANIENGQFSD
HHHHHHCCCHHHHHHHHHEEEECCCCCCCCCCCCCHHHHCCCCEEEEEEEEECCCCCCHH
ELGALILTNETLQNRLLDNIVATARQYGFRDIHFDFEYLRPEDREAYNAFLRKAKRRFER
HHCEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECHHCCCCCCHHHHHHHHHHHHHHHHH
EGWLISTALAPKTSATQRGRWYEAHDYRAHGQIVDFVVIMTYEWGYSGGPPMPVSPIGPV
CCCEEEEECCCCCCCCCCCCCEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHH
RRVLEYALSEMPAGKILMGQNLYGYDWTLPYVPGGPYARAISPQQAIALAAKYNVAIEYD
HHHHHHHHHHCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCHHHHEEEEEEEEEEEEEE
VEAQAPHFRYRDENGREHEVWFEDARSIQAKFNLVKELGLRGVSYWKLGLDFPQNWLLIN
CCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEC
DQFTVVKK
CCEEEEEC
>Mature Secondary Structure
MQIHVIQSGQTLSGIAEAYGTTVEEIVRANKLPNPDELVVGQTLVIPIVGRFYWVQRGDS
CEEEEEECCCHHHHHHHHHCCHHHHHHHHCCCCCCCCEEECCEEEEEHHHHEEEEECCCH
LWSIARRFSLPMQRLAEVNRLSLNAPLRVGQRLYIPPGAKRRAEFNAYIEPRGTTVSPAL
HHHHHHHHCCHHHHHHHHHHEECCCCHHCCCEEECCCCCCCCCCEEEEECCCCCEECHHH
EASAREAAPYLTYLSPFYFSIRRDATLQGPPLDDFPAIARANRVTLVMVVANIENGQFSD
HHHHHHCCCHHHHHHHHHEEEECCCCCCCCCCCCCHHHHCCCCEEEEEEEEECCCCCCHH
ELGALILTNETLQNRLLDNIVATARQYGFRDIHFDFEYLRPEDREAYNAFLRKAKRRFER
HHCEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECHHCCCCCCHHHHHHHHHHHHHHHHH
EGWLISTALAPKTSATQRGRWYEAHDYRAHGQIVDFVVIMTYEWGYSGGPPMPVSPIGPV
CCCEEEEECCCCCCCCCCCCCEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHH
RRVLEYALSEMPAGKILMGQNLYGYDWTLPYVPGGPYARAISPQQAIALAAKYNVAIEYD
HHHHHHHHHHCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCHHHHEEEEEEEEEEEEEE
VEAQAPHFRYRDENGREHEVWFEDARSIQAKFNLVKELGLRGVSYWKLGLDFPQNWLLIN
CCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEC
DQFTVVKK
CCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 10419957 [H]