| Definition | Methanococcus maripaludis C5 chromosome, complete genome. |
|---|---|
| Accession | NC_009135 |
| Length | 1,780,761 |
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Identifier: 134046682
GI number:
Start: 1599609
End: 1603004
Strand: Direct
Name: Not Available
Synonym: MmarC5_1656
Alternate gene names: NA
Gene position: NA
Preceding gene: 134046680
Following gene: 134046683
Centisome position: NA
GC content: NA
Gene sequence:
>3396_bases ATGCTCCATGTTTCAGCTTCAAAAGGAATGACTGAATATTTCAAAAATATTTTAGATAATGTAAAAAACCTTTACGATCT TGCAGAGGGATGCAGGAAATCTGGATACGATGTAACAGACCACGTTGAGATACCTCTGGCAAAAGATATGGCAGATAGGG TAGAGGGAATTGTCGGTCCAAAAAATGTTGCAGAACGTATCAGGGAACTAGTATCGGACTTAGGAAAAGAACCTGCGGCA CTTGAAATTGCAAAAGAAATAGTTGAAGGAAAATTTGGTGAGTTCGGGCGAGAAGTTGGAGCAGAACAAGCCGTAAGAAC AGCGTTAGCAGTTATCACGGAAGGAATCGTGGCAGCACCTCTAGAAGGTATCGCACACGTTAAAATTAAGAAAAACAACG ATGGTGGTGAATATCTTGCAATCTACTTTGCAGGACCAATTAGGAGTGCAGGAGGAACTGCTCAGGCACTTGCCGTACTT GTTGGGGATTACGTTAGAAAAAACATGGGATTAGATAAATTTAAGCCAACAGACGATGAAGTTGAAAGATACGGGGAAGA AGTGGATTTATACCAGTCCGAGGTTACTACATTCCAATACCAGCCAAAAGCTGAAGAAATCCGGGTGGCCGTTAGAAATA TATCTGTAGAAATTACTGGGGAGGCAACAGACGACGTTGAAGTTAGTGGACACAGGGATTTACCTAGAATAGAAACAAAC CAGATTAGGGGCGGTGCTCTTTTAGCACTAGTTGAGGGTGTTCTTCTAAAAGCACCTAAAATTTTAAGACACGTTGATAA ATTAGGCATTGAAGGATGGGACTGGTTAAAAGAGTTAAAAAGCAAAAAAGAAGAATTAGTCGAAGAAATTGAAGAAGAAA ATGATGAATTTAACTACGAAGAGGAAGAAGACCTATCACAATACGAAGATTATGAAGTGGAGGCTGTAACCAAGTTTATT GGGGAAGTTATTGCAGGAAGGCCTGTATTTTCACACCCCTCTAAAAAAGGCGGGTTCAGACTTAGATATGGAAGAAGTAG AAATACAGGATTTGCTACAGATGGTTTTCACCCTGCAATAATGTATTTGGTTGACGACTTCATGGCTGTAGGAACGCAGT TAAAAACCGAAAGACCTGGAAAAGCAACATGTGTAGTTCCTGTTGATAGTATCGAAGGTCCAATAGTTAAATTAAACGAT AAAAGTGTACTTAAAATAGATACGGTCGAAAAAGCAAAACAATATCGGGATGACGTTGAAGAAATTCTCTTTTTAGGGGA TATTTTGGTAAACTATGGGGATTTCTTGGAAAACAACCACACGATACTTCCAAGCAGTTGGTGTACCGAGTGGTATGAAA AAATCTTAAAATCAGAAAATTTAGAATATACAAAAGAATTTATAGAAAATCCCGATCAAAAAGAAGTAGTAAAATATGCT AAACTTACAAATACGCCACTTCATCCAAAATATACATATTTCTGGCACGATATTTCTAAAGATAATATCAATGTTCTTAG AAACTGGATTATTGGTGGGAGATACAATGAAAGCAATGATTCTTGGGGATTGACATATGATCCAGAAGACCCAGAAATTT CAATTGTAAAACGGTATTTGGAACTTATCGGATGTCCGCACACAGTAGTGGATGAAAAAGTAGAAATTTTCGAATATTAT CCGTTATTATATTCATTAGGATATGATTTTGACGAGAAACAAGATGTTGTAGAAGATATCGAAGAAAAACTTCAAAATAC GAAAAATAACATGCACTTTATAAATACAATAGCGCCATTTGAAATTCGAAGAAATGCTTACATATACGTTGGTGCAAGAA TGGGTAGGCCAGAAAAGGCAGCTTCCAGAAAGATGAAACCACCGGTAAATGGTCTTTTCCCAATTGGAAATGCCGGGGCA CTTGTAAGGCTTATAAACAAAGCTGTTGACGAGGGAAAAACTGACGAAATTGAAATTTCAAATGTAAAATGCAGCTGTGG AAATGTAAGTTTGTACAGAACATGTCCATTTTGCGGAAGTTCTGTTGAACCAAGTGGACCTTCGCGAATAAAACTTCCAA TAAAAGAATATTGGTACAAAGCGCTCGAAAATTTGAAGATAAACAAAGCTGGCGATGTAAAATGTATTAAGGGGATGACT TCAAAGGATAAAATAATCGAACCCTTAGAAAAAGCAATATTGAGGGCAAAAAACGATATATTTGTATTTAAAGACGGCAC TACAAGGTTTGACTGTACAGATGTTCCGGTAACTCATTTCAGGCCTGTAGAAATACACGGGGATATCGAAAAACTGAAAT CTCTGGGATATTTGAAAGATATTCACGGAAATCCGCTTGAAAATGAAAATCAGGTACTCGAATTAAATGTTCAAGATGTC ATAGTTCCTGAATCCTGCATGGATTACTTTTTAAATGTTTCAAAATTTATAGATGATCTTTTGGAAAAATACTACAAAAA AGATAGATTTTACAACGTGAATAAAAGAGAAGAGCTTGTAGGGCATTTAATAATTGGAATGGCGCCACACACCTCCGCAG GAATGGTTGGAAGGATCATTGGATACAGCAAAGCAAACGTAGGGTACGCTCATCCTTACTTCCATGCTTCAAAAAGAAGA AACTGTGATGGGGATGAAGATGCATTTTTCCTACTTTTAGATGCATTCATGAATTTTTCAAAGAGATTCTTGCCAGATAA AAGAGGGGGCCAGATGGATGCGCCACTGGTTCTTACAACCATTTTGGATCCGAAAGAGGTGGATGGTGAGGTCCATAACA TGGATTCGATGTGGGAATACCCTCTTGAATTCTACGAAAAATCTCTGGAAGGAATTGCTCCAAAAGAAATCAAAAAAATA ATGGAGACTGTTGAAGACAGGCTTGACAAAGAGAGTCAGTACGAAGGAATCGGATATACGCATGAAACTTTGAAAATAGA TGAAGGGCCGCTTGTTTGTGCATACAAAACATTGGGTTCCATGATGGAAAAGACCTCAGCTCAACTCGCGGTTGCAAAAA AGATTAGGGCAACTGATGAAAGGGATGTGGCGGAAAAGGTTATCCAATCGCATTTTGTTCCTGATTTAATTGGAAATTTA AGGGCTTTTTCAAGGCAAGGAGTACGGTGTAAATGCGGTGCAAAATACCGAAGGATGCCTCTAAAAGGGATTTGTAGAAA ATGTGGAAGCAGACTGATTTTAACAGTTTCAAAAGGGGCTGTTGAAAAGTACATGGACGTTTCACAAACAATGGCTGAAA AGTACAATGCAAGCGACTACATAAAACAAAGACTCGAAATCATAAGGTCTGGAATTGACAGTTTGTTTGTAAACGACAAG AGAAAGCAGGTTAAAATTGAAGATTTCTTTAAATGA
Upstream 100 bases:
>100_bases TTGGCCATTATATATGTTCCACACAAATTGTTAAAACTATATATGCTTTCAAAACCTAAATCATCTAACTACTTTTAATC TAACGTTAATCGTGATAATC
Downstream 100 bases:
>100_bases TGGAATTATTTAGAAATTGATATATATCTGCATCCCATATTAATTTTGAAAAAAGAAGGTGATTTTTTATGATTGTAACA ACAAGTGACAAAATCGAAGG
Product: DNA polymerase II large subunit
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1131_residues MLHVSASKGMTEYFKNILDNVKNLYDLAEGCRKSGYDVTDHVEIPLAKDMADRVEGIVGPKNVAERIRELVSDLGKEPAA LEIAKEIVEGKFGEFGREVGAEQAVRTALAVITEGIVAAPLEGIAHVKIKKNNDGGEYLAIYFAGPIRSAGGTAQALAVL VGDYVRKNMGLDKFKPTDDEVERYGEEVDLYQSEVTTFQYQPKAEEIRVAVRNISVEITGEATDDVEVSGHRDLPRIETN QIRGGALLALVEGVLLKAPKILRHVDKLGIEGWDWLKELKSKKEELVEEIEEENDEFNYEEEEDLSQYEDYEVEAVTKFI GEVIAGRPVFSHPSKKGGFRLRYGRSRNTGFATDGFHPAIMYLVDDFMAVGTQLKTERPGKATCVVPVDSIEGPIVKLND KSVLKIDTVEKAKQYRDDVEEILFLGDILVNYGDFLENNHTILPSSWCTEWYEKILKSENLEYTKEFIENPDQKEVVKYA KLTNTPLHPKYTYFWHDISKDNINVLRNWIIGGRYNESNDSWGLTYDPEDPEISIVKRYLELIGCPHTVVDEKVEIFEYY PLLYSLGYDFDEKQDVVEDIEEKLQNTKNNMHFINTIAPFEIRRNAYIYVGARMGRPEKAASRKMKPPVNGLFPIGNAGA LVRLINKAVDEGKTDEIEISNVKCSCGNVSLYRTCPFCGSSVEPSGPSRIKLPIKEYWYKALENLKINKAGDVKCIKGMT SKDKIIEPLEKAILRAKNDIFVFKDGTTRFDCTDVPVTHFRPVEIHGDIEKLKSLGYLKDIHGNPLENENQVLELNVQDV IVPESCMDYFLNVSKFIDDLLEKYYKKDRFYNVNKREELVGHLIIGMAPHTSAGMVGRIIGYSKANVGYAHPYFHASKRR NCDGDEDAFFLLLDAFMNFSKRFLPDKRGGQMDAPLVLTTILDPKEVDGEVHNMDSMWEYPLEFYEKSLEGIAPKEIKKI METVEDRLDKESQYEGIGYTHETLKIDEGPLVCAYKTLGSMMEKTSAQLAVAKKIRATDERDVAEKVIQSHFVPDLIGNL RAFSRQGVRCKCGAKYRRMPLKGICRKCGSRLILTVSKGAVEKYMDVSQTMAEKYNASDYIKQRLEIIRSGIDSLFVNDK RKQVKIEDFFK
Sequences:
NA
Specific function: NA
COG id: COG1933
COG function: function code L; Archaeal DNA polymerase II, large subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA