Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696801
Identifier: 126696801
GI number: 126696801
Start: 1231852
End: 1232508
Strand: Reverse
Name: 126696801
Synonym: P9301_14631
Alternate gene names: NA
Gene position: 1232508-1231852 (Counterclockwise)
Preceding gene: 126696802
Following gene: 126696795
Centisome position: 75.07
GC content: 35.31
Gene sequence:
>657_bases ATGAATTTTGATATCAAGTTTGATTTTCAAAGAAGAGATAGGCTTGGACTCATTGAGGCTATTTGGGGTCAAGATAAGAG TATCGACCAATTAGAAAGATTATGTGGAAATGTATTAAGTAAAAATGAGGTTGTTTTTATTACTAGGATTAATAGTGAAA AGGCTAATTATCTTTTAGATTTGTATGATGATGCACGATTCCATGAAGAAGCAAATTGCCTACTAATTGGGAAAAATTTT AATAAAATAATTACGAATAAAAAAGTTGCCATAATTTCAGGCGGCTCAAGCGATTTGGCCGTAACACTTGAAGCACAATT AGCGCTCGAAATTTATGGAGTGAATTGTCAATCTTTTATAGATGTTGGAGTGGCTGGACTTCATCGATTGATGAGTCAGT TAGAAGAAATTAATAAATATGATGTATTAATAGTTTGTGCTGGAATGGAAGGAGCTTTGGCAACAGTTGTGGGCGGATTG TTGGCTCAACCGATAATTGCAGTACCTGTCTCAGTAGGATACGGAGTCAGCAAGGATGGAGAAACTGCTTTAAATAGTAT GTTATCTAGCTGTTCTCCAGGTATTGCAGTTATGAATATAGATAATGGATACGGAGCAGCAATGGCCGCTCTGAGAATAA TTAAAAGTATTTCCTAA
Upstream 100 bases:
>100_bases ATGTAGTTCAACAAAAATTTGAAGATAATGTTAAAGCTGCTCTAAATGTAGGCGATAATCCTTTTGAATTGATTTATGAG GGAGAATTAGATAAACAAAG
Downstream 100 bases:
>100_bases ATAATCACTTTTTTTCTATTTCTAACAGGTTTTCTATCCATAAATTTAGTTGTTTTGATAGCATTCCTTCTTCTCTCATT TTGATTGCTTTAATCACGAC
Product: putative circadian phase modifier CpmA-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MNFDIKFDFQRRDRLGLIEAIWGQDKSIDQLERLCGNVLSKNEVVFITRINSEKANYLLDLYDDARFHEEANCLLIGKNF NKIITNKKVAIISGGSSDLAVTLEAQLALEIYGVNCQSFIDVGVAGLHRLMSQLEEINKYDVLIVCAGMEGALATVVGGL LAQPIIAVPVSVGYGVSKDGETALNSMLSSCSPGIAVMNIDNGYGAAMAALRIIKSIS
Sequences:
>Translated_218_residues MNFDIKFDFQRRDRLGLIEAIWGQDKSIDQLERLCGNVLSKNEVVFITRINSEKANYLLDLYDDARFHEEANCLLIGKNF NKIITNKKVAIISGGSSDLAVTLEAQLALEIYGVNCQSFIDVGVAGLHRLMSQLEEINKYDVLIVCAGMEGALATVVGGL LAQPIIAVPVSVGYGVSKDGETALNSMLSSCSPGIAVMNIDNGYGAAMAALRIIKSIS >Mature_218_residues MNFDIKFDFQRRDRLGLIEAIWGQDKSIDQLERLCGNVLSKNEVVFITRINSEKANYLLDLYDDARFHEEANCLLIGKNF NKIITNKKVAIISGGSSDLAVTLEAQLALEIYGVNCQSFIDVGVAGLHRLMSQLEEINKYDVLIVCAGMEGALATVVGGL LAQPIIAVPVSVGYGVSKDGETALNSMLSSCSPGIAVMNIDNGYGAAMAALRIIKSIS
Specific function: Unknown
COG id: COG1691
COG function: function code R; NCAIR mutase (PurE)-related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: NA
Molecular weight: Translated: 23577; Mature: 23577
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFDIKFDFQRRDRLGLIEAIWGQDKSIDQLERLCGNVLSKNEVVFITRINSEKANYLLD CCCEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEE LYDDARFHEEANCLLIGKNFNKIITNKKVAIISGGSSDLAVTLEAQLALEIYGVNCQSFI ECCCCCCCCCCCEEEEECCCHHHHCCCEEEEEECCCCCEEEEEEEEEEEEEEECCHHHHH DVGVAGLHRLMSQLEEINKYDVLIVCAGMEGALATVVGGLLAQPIIAVPVSVGYGVSKDG HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCHHEEEEECCCCCCCCC ETALNSMLSSCSPGIAVMNIDNGYGAAMAALRIIKSIS HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCC >Mature Secondary Structure MNFDIKFDFQRRDRLGLIEAIWGQDKSIDQLERLCGNVLSKNEVVFITRINSEKANYLLD CCCEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEE LYDDARFHEEANCLLIGKNFNKIITNKKVAIISGGSSDLAVTLEAQLALEIYGVNCQSFI ECCCCCCCCCCCEEEEECCCHHHHCCCEEEEEECCCCCEEEEEEEEEEEEEEECCHHHHH DVGVAGLHRLMSQLEEINKYDVLIVCAGMEGALATVVGGLLAQPIIAVPVSVGYGVSKDG HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCHHEEEEECCCCCCCCC ETALNSMLSSCSPGIAVMNIDNGYGAAMAALRIIKSIS HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]