Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is apt
Identifier: 126696779
GI number: 126696779
Start: 1211525
End: 1212043
Strand: Reverse
Name: apt
Synonym: P9301_14411
Alternate gene names: 126696779
Gene position: 1212043-1211525 (Counterclockwise)
Preceding gene: 126696781
Following gene: 126696778
Centisome position: 73.82
GC content: 27.55
Gene sequence:
>519_bases ATGCTTGAAAAAAATCTTAAAAATACTATTAAAAGTTATCCAGATTTTCCTAAAAAGGGAATTTTATTTAGGGATATACT TCCGGTTTTTCAAAATCCAAGTATTTTTAATAAACTGATTGAATCAATGATAGATAAAAAAATTTATCGAAAATCTGAAG CTATTTTAGCAATTGATGCTAGAGGTTTTTTATTTGGATCTGTTATCGCATATAAGCTATCAAAACCACTTATCTTGGCA AGAAAGCCTGGTAAATTACCAGGCAAACTATCAACTTATAAATATGATCTAGAGTATGGTTCTAATTCTCTTTCTCTTCA AGATGATTCCATAAGAAATCTTGATAATTTTGTCATTGTTGACGACTTATTAGCTACAGGAGGCACAGTAAATAGTGTAA GCAAAATTTTAAAAGATAAAGATAAAAATGTTTTAGGTTTAAGTGTTGTTGTTGAATTAAAAGATTTAAATGGAAGATCC AAACTTAATTTCCCTGTAGAATCAGAAATTATTTACTAG
Upstream 100 bases:
>100_bases TTTCCTATTTCTTCTTGCATTGCTCCAAGAATGCCTATATGCAAAATTTCAGCATATTGATTTTTCAATTATTTAAAAAA CTCTTCACTAATCTTACATA
Downstream 100 bases:
>100_bases ATTTGGATTTTTCTAAAAGTACATTATTGACAGCGATAAAAATAGATAATATGATATCAAAAAAAAAAGTGAAAAAAATA CTTGTAGACCAGAATGTATC
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MLEKNLKNTIKSYPDFPKKGILFRDILPVFQNPSIFNKLIESMIDKKIYRKSEAILAIDARGFLFGSVIAYKLSKPLILA RKPGKLPGKLSTYKYDLEYGSNSLSLQDDSIRNLDNFVIVDDLLATGGTVNSVSKILKDKDKNVLGLSVVVELKDLNGRS KLNFPVESEIIY
Sequences:
>Translated_172_residues MLEKNLKNTIKSYPDFPKKGILFRDILPVFQNPSIFNKLIESMIDKKIYRKSEAILAIDARGFLFGSVIAYKLSKPLILA RKPGKLPGKLSTYKYDLEYGSNSLSLQDDSIRNLDNFVIVDDLLATGGTVNSVSKILKDKDKNVLGLSVVVELKDLNGRS KLNFPVESEIIY >Mature_172_residues MLEKNLKNTIKSYPDFPKKGILFRDILPVFQNPSIFNKLIESMIDKKIYRKSEAILAIDARGFLFGSVIAYKLSKPLILA RKPGKLPGKLSTYKYDLEYGSNSLSLQDDSIRNLDNFVIVDDLLATGGTVNSVSKILKDKDKNVLGLSVVVELKDLNGRS KLNFPVESEIIY
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family
Homologues:
Organism=Homo sapiens, GI4502171, Length=160, Percent_Identity=40.625, Blast_Score=123, Evalue=1e-28, Organism=Homo sapiens, GI71773201, Length=125, Percent_Identity=40.8, Blast_Score=99, Evalue=2e-21, Organism=Escherichia coli, GI1786675, Length=158, Percent_Identity=37.9746835443038, Blast_Score=120, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17509087, Length=159, Percent_Identity=40.251572327044, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6323619, Length=167, Percent_Identity=40.1197604790419, Blast_Score=118, Evalue=5e-28, Organism=Saccharomyces cerevisiae, GI6320649, Length=169, Percent_Identity=32.5443786982249, Blast_Score=87, Evalue=1e-18, Organism=Drosophila melanogaster, GI17136334, Length=169, Percent_Identity=38.4615384615385, Blast_Score=112, Evalue=8e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APT_PROM0 (A3PE89)
Other databases:
- EMBL: CP000576 - RefSeq: YP_001091665.1 - ProteinModelPortal: A3PE89 - SMR: A3PE89 - STRING: A3PE89 - GeneID: 4911280 - GenomeReviews: CP000576_GR - KEGG: pmg:P9301_14411 - eggNOG: COG0503 - HOGENOM: HBG703830 - OMA: GILFYDI - ProtClustDB: PRK02304 - BioCyc: PMAR167546:P9301ORF_1464-MONOMER - GO: GO:0005737 - HAMAP: MF_00004 - InterPro: IPR005764 - InterPro: IPR000836
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.7
Molecular weight: Translated: 19329; Mature: 19329
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEKNLKNTIKSYPDFPKKGILFRDILPVFQNPSIFNKLIESMIDKKIYRKSEAILAIDA CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC RGFLFGSVIAYKLSKPLILARKPGKLPGKLSTYKYDLEYGSNSLSLQDDSIRNLDNFVIV CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEECCCCCCEECCCHHHCCCCEEEE DDLLATGGTVNSVSKILKDKDKNVLGLSVVVELKDLNGRSKLNFPVESEIIY HHHHHCCCCHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCEECCCCCCCCCC >Mature Secondary Structure MLEKNLKNTIKSYPDFPKKGILFRDILPVFQNPSIFNKLIESMIDKKIYRKSEAILAIDA CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC RGFLFGSVIAYKLSKPLILARKPGKLPGKLSTYKYDLEYGSNSLSLQDDSIRNLDNFVIV CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEECCCCCCEECCCHHHCCCCEEEE DDLLATGGTVNSVSKILKDKDKNVLGLSVVVELKDLNGRSKLNFPVESEIIY HHHHHCCCCHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA