Click here to switch to the map view.

The map label for this gene is yedA [C]

Identifier: 126696718

GI number: 126696718

Start: 1149685

End: 1150626

Strand: Reverse

Name: yedA [C]

Synonym: P9301_13801

Alternate gene names: 126696718

Gene position: 1150626-1149685 (Counterclockwise)

Preceding gene: 126696731

Following gene: 126696717

Centisome position: 70.08

GC content: 34.39

Gene sequence:

>942_bases
ATGAATTCAATCCTAAATTGGCTTTTAATGATTCTTCCTTTTGCACTTTGGGGTACTTCAATGGCGGCTATGACTCCCTT
AGTTTCTAATGCTGACCCGGAATTTGTAGCTTCTTTAAGATTACTTCCTGCAGGGATTCTTGTTCTAATTACAACATATT
TGTTAAAAAGAGATTTAAAAATTTATAGATGTGATTTGAAGTGGTTTTTTGTCTTTACGATAGTAGATGCTACTTTTTTT
CAGTTTTTTTTAACTTATGGTATCGAAAAGACTGGAGCAGGTTTAGGCTCTGTCTTAATTGATTCTCAACCTCTTTTGGT
AGCTATTTTAGCGAGAGCAATTTTTGGAAATTTGATTAATCCAATAGGTTGGTTAGGACTAATTTTTGGATTGGGAGGAA
TAGTATTTTTAGGGGTTCCACAAGAATTTTTAGGTAATTGGTGGTTGATGTCTGACAAATCTATAAATGATGTTGCTTTT
AACTTTGGAGAGCTCTGGATGCTTGCAGCCGCTTTAGCTATGGCATTAGGAACAATTTTAATTAGATTCACTTGTACTAA
AAGTGATTCAGTTGCAGTTACAGGTTGGCATATGGTTTTAGGAAGTTTGCCCTTAATTGTTAAGCACTGCTTACAAACAA
GTTTCAAAATAATTCCAGATTGGTCACTATTCGATTGGGGACTTATGTCATTTGCAAGTATTTTTGGAGGGGCAATAGCG
TATGGATTGTTTTTCTATTTTGCCAATAATAAAGAAATAACTGGATTTAGTACTCTTGCATTTTTAACTCCTGTATTTGC
TCTTCTTAGTGGAGGTGTTTGGTTAGATGAAAGGCTCACTATTGTTCAGTGGATTGGAGTAGTGTTTGTTCTTATCTCTG
TATTTCTTGTTAGCCAGCGAAAGAGTTTATGGGAAAATAAGTTTTCTGACACTACTATTTAA

Upstream 100 bases:

>100_bases
TATGCGAGCCATTCTTTTTTTTGACTTTCGTCTAAAAGGCCAAATCATTCTTTTAAGGTAAAAAAATAAAACTACTTTAA
AAAGATTATCAGCAGAACTA

Downstream 100 bases:

>100_bases
TTAGTGTCTTTTTGTAAAAAGTCTAATAATGCGAATAGTTTTGATTAGTACTCCAATAGGATTCTTGGGCAGTGGTAAAG
GTGGTGGAGTTGAATTAACT

Product: SMR family transporter PecM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MNSILNWLLMILPFALWGTSMAAMTPLVSNADPEFVASLRLLPAGILVLITTYLLKRDLKIYRCDLKWFFVFTIVDATFF
QFFLTYGIEKTGAGLGSVLIDSQPLLVAILARAIFGNLINPIGWLGLIFGLGGIVFLGVPQEFLGNWWLMSDKSINDVAF
NFGELWMLAAALAMALGTILIRFTCTKSDSVAVTGWHMVLGSLPLIVKHCLQTSFKIIPDWSLFDWGLMSFASIFGGAIA
YGLFFYFANNKEITGFSTLAFLTPVFALLSGGVWLDERLTIVQWIGVVFVLISVFLVSQRKSLWENKFSDTTI

Sequences:

>Translated_313_residues
MNSILNWLLMILPFALWGTSMAAMTPLVSNADPEFVASLRLLPAGILVLITTYLLKRDLKIYRCDLKWFFVFTIVDATFF
QFFLTYGIEKTGAGLGSVLIDSQPLLVAILARAIFGNLINPIGWLGLIFGLGGIVFLGVPQEFLGNWWLMSDKSINDVAF
NFGELWMLAAALAMALGTILIRFTCTKSDSVAVTGWHMVLGSLPLIVKHCLQTSFKIIPDWSLFDWGLMSFASIFGGAIA
YGLFFYFANNKEITGFSTLAFLTPVFALLSGGVWLDERLTIVQWIGVVFVLISVFLVSQRKSLWENKFSDTTI
>Mature_313_residues
MNSILNWLLMILPFALWGTSMAAMTPLVSNADPEFVASLRLLPAGILVLITTYLLKRDLKIYRCDLKWFFVFTIVDATFF
QFFLTYGIEKTGAGLGSVLIDSQPLLVAILARAIFGNLINPIGWLGLIFGLGGIVFLGVPQEFLGNWWLMSDKSINDVAF
NFGELWMLAAALAMALGTILIRFTCTKSDSVAVTGWHMVLGSLPLIVKHCLQTSFKIIPDWSLFDWGLMSFASIFGGAIA
YGLFFYFANNKEITGFSTLAFLTPVFALLSGGVWLDERLTIVQWIGVVFVLISVFLVSQRKSLWENKFSDTTI

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34791; Mature: 34791

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSILNWLLMILPFALWGTSMAAMTPLVSNADPEFVASLRLLPAGILVLITTYLLKRDLK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
IYRCDLKWFFVFTIVDATFFQFFLTYGIEKTGAGLGSVLIDSQPLLVAILARAIFGNLIN
HEEECHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHH
PIGWLGLIFGLGGIVFLGVPQEFLGNWWLMSDKSINDVAFNFGELWMLAAALAMALGTIL
HHHHHHHHHHHHHHEEECCCHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IRFTCTKSDSVAVTGWHMVLGSLPLIVKHCLQTSFKIIPDWSLFDWGLMSFASIFGGAIA
HHEEECCCCCEEEEHHHHHHCCHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHH
YGLFFYFANNKEITGFSTLAFLTPVFALLSGGVWLDERLTIVQWIGVVFVLISVFLVSQR
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KSLWENKFSDTTI
HHHHHCCCCCCCC
>Mature Secondary Structure
MNSILNWLLMILPFALWGTSMAAMTPLVSNADPEFVASLRLLPAGILVLITTYLLKRDLK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
IYRCDLKWFFVFTIVDATFFQFFLTYGIEKTGAGLGSVLIDSQPLLVAILARAIFGNLIN
HEEECHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHH
PIGWLGLIFGLGGIVFLGVPQEFLGNWWLMSDKSINDVAFNFGELWMLAAALAMALGTIL
HHHHHHHHHHHHHHEEECCCHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IRFTCTKSDSVAVTGWHMVLGSLPLIVKHCLQTSFKIIPDWSLFDWGLMSFASIFGGAIA
HHEEECCCCCEEEEHHHHHHCCHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHH
YGLFFYFANNKEITGFSTLAFLTPVFALLSGGVWLDERLTIVQWIGVVFVLISVFLVSQR
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KSLWENKFSDTTI
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]