Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696565
Identifier: 126696565
GI number: 126696565
Start: 1042932
End: 1044089
Strand: Reverse
Name: 126696565
Synonym: P9301_12271
Alternate gene names: NA
Gene position: 1044089-1042932 (Counterclockwise)
Preceding gene: 126696566
Following gene: 126696564
Centisome position: 63.59
GC content: 41.28
Gene sequence:
>1158_bases ATGAAGCTTTTTAAAAGCTTGCTTGTAGCTCCTGCAACATTAGGACTTTTAGCTCCTGTAGCAGCTACAGCAAATGAAGT TACAATCAGTGACTTCACACCTGCAGAACAACTTGCTATTACAAATAGCCGTGTAGACGGTTTAGAAGCAAGACTAAACA ACTTTGAAGCTGGTAGTTTCTCAGAAACAACAACTGCTTCCTTCTCAGTAGATTTCGCGATCGGTGCTGTTGATGGAAGA GGTACAACAACTACAATTACTGATGGAGATGAAGATCTTCAGGCTACTTACGGTTTCCAGATTGACTTGAACACAAGTTT CACTGGGGAAGATTCACTTGATATCTCTCTTGACGCTGGTAATGGTAACGGCTCACTAGGTGAATTCGACCTTAATGGCC CTGCTACTACTGACGCAGCTAATGAAATAACTGCTAGCGACATCCTAACTGTTGATGGTATTTCATATACTTTCCCTCTA GGTGGCGCAACTGCTTTCGTTGGTGACAATACAGATGGAAGTATGCTATTTACTACAGCTTGTGTATATGGCGGACCATC TAACACACTTGATGATTGCGGTAACGTAACTGCTGGAATCACAGGTGGTGGATTATCTATCGGTGCTGCATATGACTTCG ATAACGGATTCACAACAGCATTTGGTGCTCAATTCAGTGAAACTGGTATAGCTACTGATGAAACTGACGATTCTTATGCG TTAAACGCTGCATACATTAGCGATAGCTACGGTGCTTCTATCACTTACGCAAACATCGAAGATGGTAACGACAACGATAC ATACATGGCATTTAATGGTTATTATTCATTTGATAACGGTTTAAACATCAGTGCTGGTTATGAAATCGGTGATCTTGATA ATGCAGCTGCAACTGTTGACGAAACAGAAGCTTACTTCGTGGGAATCAACGGTGAAGTTGGACCAGGTGAATTAGGTGCT GCTGCAGGTACTGCCGGAAGAATGGTTGAAACCGCTACTGGAATACCTGATAGGATGATGTATGAAATTTATTATTCATA CGCAGTAAATGATGGAATGACAATCACTCCACTTATTTATACTGTGGAAGCTGATCCTGGTGAAACAGGAGATTTGGATG AAACTGGAATTATGGTTAAAACATCATTCAGCTTCTAA
Upstream 100 bases:
>100_bases ACTGTCACATATTTTTTAAAAATGTAGCGGTTGCTACTTGATTTCGTATGGGTTAATACACTATCTTAAGGTGTACTTTA AATTTCGTGTGAGGAAATTT
Downstream 100 bases:
>100_bases ATCTAAATTTAATTTAGAAATCTTACACACATTAAAAGACCTGCATGTAGCAGGTCTTTTTTTATTTAGACAACTTTTTT TTTGTCTACCGTGGCTTGTC
Product: porin
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MKLFKSLLVAPATLGLLAPVAATANEVTISDFTPAEQLAITNSRVDGLEARLNNFEAGSFSETTTASFSVDFAIGAVDGR GTTTTITDGDEDLQATYGFQIDLNTSFTGEDSLDISLDAGNGNGSLGEFDLNGPATTDAANEITASDILTVDGISYTFPL GGATAFVGDNTDGSMLFTTACVYGGPSNTLDDCGNVTAGITGGGLSIGAAYDFDNGFTTAFGAQFSETGIATDETDDSYA LNAAYISDSYGASITYANIEDGNDNDTYMAFNGYYSFDNGLNISAGYEIGDLDNAAATVDETEAYFVGINGEVGPGELGA AAGTAGRMVETATGIPDRMMYEIYYSYAVNDGMTITPLIYTVEADPGETGDLDETGIMVKTSFSF
Sequences:
>Translated_385_residues MKLFKSLLVAPATLGLLAPVAATANEVTISDFTPAEQLAITNSRVDGLEARLNNFEAGSFSETTTASFSVDFAIGAVDGR GTTTTITDGDEDLQATYGFQIDLNTSFTGEDSLDISLDAGNGNGSLGEFDLNGPATTDAANEITASDILTVDGISYTFPL GGATAFVGDNTDGSMLFTTACVYGGPSNTLDDCGNVTAGITGGGLSIGAAYDFDNGFTTAFGAQFSETGIATDETDDSYA LNAAYISDSYGASITYANIEDGNDNDTYMAFNGYYSFDNGLNISAGYEIGDLDNAAATVDETEAYFVGINGEVGPGELGA AAGTAGRMVETATGIPDRMMYEIYYSYAVNDGMTITPLIYTVEADPGETGDLDETGIMVKTSFSF >Mature_385_residues MKLFKSLLVAPATLGLLAPVAATANEVTISDFTPAEQLAITNSRVDGLEARLNNFEAGSFSETTTASFSVDFAIGAVDGR GTTTTITDGDEDLQATYGFQIDLNTSFTGEDSLDISLDAGNGNGSLGEFDLNGPATTDAANEITASDILTVDGISYTFPL GGATAFVGDNTDGSMLFTTACVYGGPSNTLDDCGNVTAGITGGGLSIGAAYDFDNGFTTAFGAQFSETGIATDETDDSYA LNAAYISDSYGASITYANIEDGNDNDTYMAFNGYYSFDNGLNISAGYEIGDLDNAAATVDETEAYFVGINGEVGPGELGA AAGTAGRMVETATGIPDRMMYEIYYSYAVNDGMTITPLIYTVEADPGETGDLDETGIMVKTSFSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39827; Mature: 39827
Theoretical pI: Translated: 3.21; Mature: 3.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFKSLLVAPATLGLLAPVAATANEVTISDFTPAEQLAITNSRVDGLEARLNNFEAGSF CHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHEEEECCCCCCHHHHHCCCCCCCC SETTTASFSVDFAIGAVDGRGTTTTITDGDEDLQATYGFQIDLNTSFTGEDSLDISLDAG CCCCEEEEEEEEEEEEECCCCCEEEECCCCCCCEEEEEEEEEECCCCCCCCCEEEEEECC NGNGSLGEFDLNGPATTDAANEITASDILTVDGISYTFPLGGATAFVGDNTDGSMLFTTA CCCCCEEEEECCCCCCCCCCCCCCHHHEEEECCCEEEEECCCEEEEECCCCCCCEEEEEE CVYGGPSNTLDDCGNVTAGITGGGLSIGAAYDFDNGFTTAFGAQFSETGIATDETDDSYA EEECCCCCCHHHCCCEEEEEECCCEEEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCEE LNAAYISDSYGASITYANIEDGNDNDTYMAFNGYYSFDNGLNISAGYEIGDLDNAAATVD EEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCEEEECCCEECCCCCCCEEEE ETEAYFVGINGEVGPGELGAAAGTAGRMVETATGIPDRMMYEIYYSYAVNDGMTITPLIY CCCEEEEEECCCCCCCCCCCCCCCCCCEEEHHCCCCHHEEEEEEEEEEECCCCEEEEEEE TVEADPGETGDLDETGIMVKTSFSF EEECCCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure MKLFKSLLVAPATLGLLAPVAATANEVTISDFTPAEQLAITNSRVDGLEARLNNFEAGSF CHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHEEEECCCCCCHHHHHCCCCCCCC SETTTASFSVDFAIGAVDGRGTTTTITDGDEDLQATYGFQIDLNTSFTGEDSLDISLDAG CCCCEEEEEEEEEEEEECCCCCEEEECCCCCCCEEEEEEEEEECCCCCCCCCEEEEEECC NGNGSLGEFDLNGPATTDAANEITASDILTVDGISYTFPLGGATAFVGDNTDGSMLFTTA CCCCCEEEEECCCCCCCCCCCCCCHHHEEEECCCEEEEECCCEEEEECCCCCCCEEEEEE CVYGGPSNTLDDCGNVTAGITGGGLSIGAAYDFDNGFTTAFGAQFSETGIATDETDDSYA EEECCCCCCHHHCCCEEEEEECCCEEEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCEE LNAAYISDSYGASITYANIEDGNDNDTYMAFNGYYSFDNGLNISAGYEIGDLDNAAATVD EEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCEEEECCCEECCCCCCCEEEE ETEAYFVGINGEVGPGELGAAAGTAGRMVETATGIPDRMMYEIYYSYAVNDGMTITPLIY CCCEEEEEECCCCCCCCCCCCCCCCCCEEEHHCCCCHHEEEEEEEEEEECCCCEEEEEEE TVEADPGETGDLDETGIMVKTSFSF EEECCCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA