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The map label for this gene is 126696452

Identifier: 126696452

GI number: 126696452

Start: 943475

End: 943777

Strand: Reverse

Name: 126696452

Synonym: P9301_11141

Alternate gene names: NA

Gene position: 943777-943475 (Counterclockwise)

Preceding gene: 126696453

Following gene: 126696451

Centisome position: 57.48

GC content: 28.71

Gene sequence:

>303_bases
ATGTTTGATAATCTTGGAACTGCTCTAGTACAGGCATTAGGCTTCTTTGCTGTTTTTGGGTTTTTTGTATATCAAACTTT
ATTTGCAGATAGAAAATCCAAAAATTCAAAACCAAATCCTAAAAAAACAAAGATTTCCGAAACAAAGGAATCAATTAAAA
AAGAACCTAAAAAAGGCTTATTTAACAGAAAATCTAAACCTATTGAAGAGAATTTACCAGTCCAAAAAAAGGGATTATTT
GGGAGAAAAAAAGAAGTTACTAAAGAAGAGATTAAACCAAAGAAAAAAGGTTGGTTTAAATAG

Upstream 100 bases:

>100_bases
TTCTCATACTGAGAAGAAGGCAGAAATTGAATGCTTATCTGATGATAAAAAATGCATAGAAGCGAAAGAAAAAGAATCAC
TATACAAAGTTGAGGCCTAA

Downstream 100 bases:

>100_bases
GTAAAGGTACTTAAACTCTTTTTTGATATCTTTTATACAAAAACTTTTTTTAGGAGCTTTATAATTTATAGAATATAATT
TTCAAAATGAACCATAGAGA

Product: integrin alpha cytoplasmic region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MFDNLGTALVQALGFFAVFGFFVYQTLFADRKSKNSKPNPKKTKISETKESIKKEPKKGLFNRKSKPIEENLPVQKKGLF
GRKKEVTKEEIKPKKKGWFK

Sequences:

>Translated_100_residues
MFDNLGTALVQALGFFAVFGFFVYQTLFADRKSKNSKPNPKKTKISETKESIKKEPKKGLFNRKSKPIEENLPVQKKGLF
GRKKEVTKEEIKPKKKGWFK
>Mature_100_residues
MFDNLGTALVQALGFFAVFGFFVYQTLFADRKSKNSKPNPKKTKISETKESIKKEPKKGLFNRKSKPIEENLPVQKKGLF
GRKKEVTKEEIKPKKKGWFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11553; Mature: 11553

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDNLGTALVQALGFFAVFGFFVYQTLFADRKSKNSKPNPKKTKISETKESIKKEPKKGL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHHH
FNRKSKPIEENLPVQKKGLFGRKKEVTKEEIKPKKKGWFK
HCCCCCCCCCCCCCCHHCCCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFDNLGTALVQALGFFAVFGFFVYQTLFADRKSKNSKPNPKKTKISETKESIKKEPKKGL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHHH
FNRKSKPIEENLPVQKKGLFGRKKEVTKEEIKPKKKGWFK
HCCCCCCCCCCCCCCHHCCCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA